IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS315



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.60 STD DEV: 3.72
Streptococcus pyogenes MGAS315, complete genome - 1..1900521
1865 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
446	 44.08	+1	490193..491392	-	399	21909982	ugl	SpyM3_0446	-	putative unsaturated glucuronyl hydrolase
447	 42.01	0	491392..491829	-	145	21909983	agaF	SpyM3_0447	-	putative PTS dependent N-acetyl-galactosamine- and galactosamine IIA component
448	 41.26	0	492164..492958	+	264	21909984	-	SpyM3_0448	-	gluconate 5-dehydrogenase
449	 41.12	0	492983..493624	+	213	21909985	-	SpyM3_0449	-	hypothetical protein
450	 43.31	+1	493653..494654	+	333	21909986	kdgK	SpyM3_0450	-	2-dehydro-3-deoxygluconokinase
451	 41.51	0	494659..495294	+	211	21909987	kgdA	SpyM3_0451	-	keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase
452	 37.02	0	495591..496241	+	216	21909988	-	SpyM3_0452	-	hypothetical protein
453	 36.89	0	496937..498061	+	374	21909989	-	SpyM3_0453	-	iron-sulfur cluster-binding protein
454	 39.55	0	498248..499228	+	326	21909990	prfB	SpyM3_0454	-	peptide chain release factor 2
455	 40.98	0	499247..499939	+	230	21909991	ftsE	SpyM3_0455	-	putative cell-division ATP-binding protein
456	 35.91	0	499932..500861	+	309	21909992	ftsX	SpyM3_0456	-	putative cell-division protein
457	 36.77	0	501170..501868	-	232	21909993	-	SpyM3_0457	-	putative metallo-beta-lactamase superfamily protein
458	 39.61	0	502036..502800	+	254	21909994	-	SpyM3_0458	-	acetoin reductase
459	 38.13	0	502908..505409	+	833	21909995	dinG	SpyM3_0459	-	bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon
460	 42.21	0	505755..506948	+	397	21909996	aspC	SpyM3_0460	-	aspartate aminotransferase
461	 38.23	0	506969..508315	+	448	21909997	asnC	SpyM3_0461	-	asparaginyl-tRNA synthetase
462	 41.98	0	508729..509619	+	296	21909998	-	SpyM3_0462	-	hypothetical protein
463	 41.97	0	509760..510593	+	277	21909999	-	SpyM3_0463	-	hypothetical protein
464	 39.47	0	510590..511501	+	303	21910000	-	SpyM3_0464	-	hypothetical protein
465	 42.56	+1	511634..513031	+	465	21910001	pepD	SpyM3_0465	-	putative dipeptidase
466	 38.63	0	513183..514730	+	515	21910002	adcA	SpyM3_0466	-	putative adhesion protein
467	 37.62	0	514878..515600	+	240	21910003	-	SpyM3_0467	-	GntR family transcriptional regulator
468	 42.42	+1	515620..516819	+	399	21910004	agaS	SpyM3_0468	-	putative tagatose-6-phosphate aldose/ketose isomerase
469	 41.00	0	516916..517176	-	86	21910005	rpmE2	SpyM3_0469	-	50S ribosomal protein L31 type B
470	 41.83	0	517291..518232	-	313	21910006	-	SpyM3_0470	-	hypothetical protein
471	 39.78	0	518626..519075	+	149	21910007	flaV	SpyM3_0471	-	flavodoxin
472	 39.65	0	519250..519534	+	94	21910008	-	SpyM3_0472	-	hypothetical protein
473	 42.36	+1	519527..520789	+	420	21910009	-	SpyM3_0473	-	putative transmembrane protein
474	 44.54	+1	520904..521251	+	115	21910010	rplS	SpyM3_0474	-	50S ribosomal protein L19
475	 38.07	0	522267..522836	+	189	21910011	-	SpyM3_0475	-	putative hydrolase
476	 39.78	0	522837..524789	+	650	161485752	gyrB	SpyM3_0476	-	DNA gyrase subunit B
477	 37.04	0	525157..526881	+	574	21910013	-	SpyM3_0477	-	septation ring formation regulator EzrA
478	 34.42	-1	527013..527471	-	152	21910014	-	SpyM3_0478	-	hypothetical protein
479	 41.82	0	527704..529011	+	435	21910015	eno	SpyM3_0479	-	phosphopyruvate hydratase
480	 39.51	0	529573..529734	+	53	21910016	sagA	SpyM3_0480	-	streptolysin S associated protein
481	 33.96	-1	529956..530906	+	316	21910017	sagB	SpyM3_0481	-	streptolysin S associated protein
482	 35.22	0	530903..531961	+	352	21910018	sagC	SpyM3_0482	-	streptolysin S associated protein
483	 36.13	0	531981..533339	+	452	21910019	-	SpyM3_0483	-	hypothetical protein
484	 33.18	-1	533314..533985	+	223	21910020	-	SpyM3_0484	-	hypothetical protein
485	 35.23	0	533982..534665	+	227	21910021	-	SpyM3_0485	-	hypothetical protein
486	 35.93	0	534688..535611	+	307	21910022	-	SpyM3_0486	-	putative ABC transporter ATP-binding protein
487	 32.54	-1	535620..536747	+	375	21910023	sagH	SpyM3_0487	-	ABC transporter ATP-binding protein
488	 32.62	-1	536744..537862	+	372	21910024	-	SpyM3_0488	-	putative ABC transporter ATP-binding protein
489	 37.91	0	538433..541165	+	910	21910025	-	SpyM3_0489	-	hypothetical protein
490	 31.94	-1	541443..541943	+	166	21910026	-	SpyM3_0490	-	hypothetical protein
491	 40.48	0	542138..544096	+	652	21910027	ligA	SpyM3_0491	-	NAD-dependent DNA ligase LigA
492	 37.44	0	544110..545132	+	340	161485751	-	SpyM3_0492	-	putative lipid kinase
493	 38.89	0	545524..545721	+	65	21910029	-	SpyM3_0493	-	F0F1 ATP synthase subunit C
494	 38.35	0	545756..546472	+	238	21910030	-	SpyM3_0494	-	F0F1 ATP synthase subunit A
495	 38.38	0	546490..546984	+	164	21910031	-	SpyM3_0495	-	F0F1 ATP synthase subunit B
496	 34.08	-1	546984..547520	+	178	21910032	-	SpyM3_0496	-	F0F1 ATP synthase subunit delta
497	 42.35	+1	547536..549044	+	502	21910033	-	SpyM3_0497	-	F0F1 ATP synthase subunit alpha
498	 37.67	0	549060..549935	+	291	21910034	-	SpyM3_0498	-	F0F1 ATP synthase subunit gamma
499	 42.86	+1	550097..551503	+	468	21910035	-	SpyM3_0499	-	F0F1 ATP synthase subunit beta
500	 42.21	0	551516..551932	+	138	21910036	atpC	SpyM3_0500	-	F0F1 ATP synthase subunit epsilon
501	 35.66	0	552198..552455	+	85	21910037	-	SpyM3_0501	-	hypothetical protein
502	 41.35	0	552520..553791	+	423	21910038	murA	SpyM3_0502	-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase
503	 33.33	-1	553795..553983	+	62	21910039	-	SpyM3_0503	-	hypothetical protein
504	 41.62	0	554019..554597	+	192	21910040	endA	SpyM3_0504	-	putative DNA-entry nuclease
505	 43.67	+1	554584..554883	+	99	21910041	endA	SpyM3_0505	-	putative DNA-entry nuclease
506	 41.67	0	555166..556209	+	347	21910042	pheS	SpyM3_0506	-	phenylalanyl-tRNA synthetase subunit alpha
507	 42.23	0	556464..558824	+	786	21910043	pheT	SpyM3_0507	-	phenylalanyl-tRNA synthetase subunit beta
508	 39.95	0	558934..559311	+	125	21910044	-	SpyM3_0508	-	hypothetical protein
509	 39.02	0	559304..559690	+	128	21910045	-	SpyM3_0509	-	hypothetical protein
510	 35.38	0	559763..560839	+	358	21910046	-	SpyM3_0510	-	hypothetical protein
511	 41.26	0	560849..561517	+	222	21910047	-	SpyM3_0511	-	ABC transporter ATP-binding protein
512	 43.96	+1	561622..562374	-	250	21910048	-	SpyM3_0512	-	hypothetical protein
513	 34.83	-1	562689..565904	+	1071	21910049	rexB	SpyM3_0513	-	ATP-dependent nuclease subunit B
514	 36.36	0	565865..569533	+	1222	21910050	rexA	SpyM3_0514	-	putative ATP-dependent exonuclease subunit A
515	 35.67	0	569673..570485	+	270	21910051	-	SpyM3_0515	-	putative ABC transporter
516	 36.72	0	570626..570802	+	58	21910052	rpsU	SpyM3_0516	-	30S ribosomal protein S21
517	 35.26	0	570930..571292	-	120	21910053	mscL	SpyM3_0517	-	putative large conductance mechanosensitive channel
518	 38.42	0	571467..573236	+	589	21910054	dnaG	SpyM3_0518	-	DNA primase
519	 38.65	0	573245..574354	+	369	21910055	rpoD	SpyM3_0519	-	RNA polymerase sigma factor RpoD
520	 39.82	0	574590..574928	+	112	21910056	-	SpyM3_0520	-	hypothetical protein
521	 40.35	0	575066..575920	+	284	21910057	rmlD	SpyM3_0521	-	putative dTDP-4-keto-L-rhamnose reductase
522	 39.31	0	576039..577193	+	384	21910058	rgpAc	SpyM3_0522	-	hypothetical protein
523	 37.41	0	577183..578115	+	310	21910059	rgpBc	SpyM3_0523	-	alpha-L-Rha alpha-1,3-L-rhamnosyltransferase
524	 33.96	-1	578118..578921	+	267	21910060	rgpCc	SpyM3_0524	-	putative ABC-transporter (permease protein)
525	 35.24	0	578921..580126	+	401	21910061	rgpDc	SpyM3_0525	-	ABC transporter ATP-binding protein
526	 32.24	-1	580151..581158	+	335	21910062	rgpEc	SpyM3_0526	-	putative glycosyltransferase
527	 31.67	-1	581155..582900	+	581	21910063	rgpFc	SpyM3_0527	-	hypothetical protein
528	 32.04	-1	582897..585371	+	824	21910064	-	SpyM3_0528	-	hypothetical protein
529	 35.92	0	585550..586245	+	231	21910065	-	SpyM3_0529	-	putative glycosyl transferase
530	 27.19	-2	586247..586588	+	113	21910066	-	SpyM3_0530	-	hypothetical protein
531	 29.99	-2	586581..587867	+	428	21910067	-	SpyM3_0531	-	hypothetical protein
532	 29.99	-2	587848..589344	+	498	21910068	-	SpyM3_0532	-	hypothetical protein
533	 38.81	0	589438..590661	+	407	21910069	pepT	SpyM3_0533	-	peptidase T
534	 32.31	-1	590702..591190	+	162	21910070	-	SpyM3_0534	-	putative pore-forming peptide
535	 37.37	0	591177..591374	-	65	21910071	-	SpyM3_0535	-	putative ferredoxin
536	 37.95	0	591424..591900	+	158	21910072	-	SpyM3_0536	-	hypothetical protein
537	 40.09	0	591915..592595	+	226	21910073	cmk	SpyM3_0537	-	cytidylate kinase
538	 37.66	0	592757..593287	+	176	21910074	infC	SpyM3_0538	-	translation initiation factor IF-3
539	 42.42	+1	593329..593526	+	65	21910075	rpmI	SpyM3_0539	-	50S ribosomal protein L35
540	 41.67	0	593585..593944	+	119	21910076	rplT	SpyM3_0540	-	50S ribosomal protein L20
541	 35.05	0	594235..596445	-	736	21910077	-	SpyM3_0541	-	hypothetical protein
542	 37.03	0	596553..597716	+	387	21910078	-	SpyM3_0542	-	hypothetical protein
543	 37.26	0	597713..598399	+	228	21910079	aroD	SpyM3_0543	-	3-dehydroquinate dehydratase
544	 41.99	0	598493..599659	+	388	161485750	aroF	SpyM3_0544	-	chorismate synthase
545	 39.47	0	599720..600061	+	113	21910081	-	SpyM3_0545	-	hypothetical protein
38.60	MEAN

3.72	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.