IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS315



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.60 STD DEV: 3.72
Streptococcus pyogenes MGAS315, complete genome - 1..1900521
1865 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
339	 41.39	0	379537..379809	+	90	21909875	-	SpyM3_0339	-	putative bacteriocin
340	 39.30	0	379822..380022	+	66	21909876	-	SpyM3_0340	-	hypothetical protein
341	 48.06	+2	380383..380511	+	42	21909877	-	SpyM3_0341	-	hypothetical protein
342	 29.79	-2	380561..380842	+	93	21909878	-	SpyM3_0342	-	hypothetical protein
343	 42.44	+1	381691..382755	+	354	21909879	-	SpyM3_0343	-	hypothetical protein
344	 40.85	0	382848..383246	+	132	21909880	-	SpyM3_0344	-	hypothetical protein
345	 36.67	0	383595..383864	-	89	21909881	-	SpyM3_0345	-	hypothetical protein
346	 36.79	0	384935..385801	+	288	21909882	mutR	SpyM3_0346	-	putative positive transcriptional regulator
347	 42.39	+1	385973..386800	+	275	21909883	fpg	SpyM3_0347	-	formamidopyrimidine-DNA glycosylase
348	 41.75	0	386797..387390	+	197	21909884	coaE	SpyM3_0348	-	dephospho-CoA kinase
349	 43.25	+1	387580..389082	+	500	21909885	-	SpyM3_0349	-	ATPase
350	 38.27	0	389204..390397	+	397	21909886	-	SpyM3_0350	-	putative multi-drug resistance efflux pump
351	 37.55	0	390586..390822	+	78	21909887	secG	SpyM3_0351	-	preprotein translocase subunit SecG
352	 41.31	0	390994..393249	+	751	21909888	vacB	SpyM3_0352	-	putative exoribonuclease R
353	 40.81	0	393252..393719	+	155	21909889	smpB	SpyM3_0353	-	SsrA-binding protein
354	 37.27	0	393734..394444	+	236	21909890	-	SpyM3_0354	-	putative glutamine cyclotransferase
355	 42.75	+1	394561..395208	-	215	21909891	pcp	SpyM3_0355	-	pyrrolidone-carboxylate peptidase
356	 40.02	0	395258..396184	-	308	21909892	-	SpyM3_0356	-	hypothetical protein
357	 38.89	0	396184..396867	-	227	21909893	-	SpyM3_0357	-	hypothetical protein
358	 37.28	0	397078..398064	-	328	21909894	-	SpyM3_0358	-	putative sugar transferase
359	 38.10	0	398149..398526	-	125	21909895	gloA	SpyM3_0359	-	putative lactoylglutathione lyase
360	 40.84	0	398537..399202	-	221	21909896	-	SpyM3_0360	-	NAD(P)H-dependent quinone reductase
361	 42.08	0	399251..400336	-	361	21909897	pepQ	SpyM3_0361	-	putative Xaa-Pro dipeptidase
362	 39.92	0	400510..401511	+	333	21909898	ccpA	SpyM3_0362	-	putative catabolite control protein
363	 38.94	0	401642..402640	+	332	21909899	-	SpyM3_0363	-	putative sugar transferase
364	 38.50	0	402642..403976	+	444	21909900	-	SpyM3_0364	-	1,2-diacylglycerol 3-glucosyltransferase
365	 42.90	+1	404398..406341	+	647	21909901	thrS	SpyM3_0365	-	threonyl-tRNA synthetase
366	 40.08	0	406482..407474	+	330	21909902	-	SpyM3_0366	-	putative ABC transporter, ATP-binding protein
367	 38.46	0	407476..408294	+	272	21909903	-	SpyM3_0367	-	hypothetical protein
368	 39.44	0	408296..409081	+	261	21909904	-	SpyM3_0368	-	ABC transporter permease
369	 44.39	+1	409827..410975	+	382	21909905	-	SpyM3_0369	-	putative acetyl coenzyme A acetyltransferase
370	 37.42	0	410932..412179	+	415	21909906	-	SpyM3_0370	-	hypothetical protein
371	 37.75	0	412275..413270	+	331	21909907	-	SpyM3_0371	-	hypothetical protein
372	 39.24	0	413432..414142	+	236	21909908	vicR	SpyM3_0372	-	two-component response regulator
373	 37.69	0	414135..415487	+	450	21909909	vicK	SpyM3_0373	-	two-component sensor histidine kinase
374	 37.53	0	415491..416300	+	269	21909910	vicX	SpyM3_0374	-	VicX protein
375	 37.37	0	416743..417435	+	230	21909911	rnc	SpyM3_0375	-	ribonuclease III
376	 36.68	0	417436..420963	+	1175	21909912	smc	SpyM3_0376	-	putative chromosome condensation and segregation SMC protein
377	 32.51	-1	421228..422079	-	283	21909913	-	SpyM3_0377	-	putative positive transcriptional regulator
378	 27.95	-2	422354..423226	+	290	21909914	aroE.2	SpyM3_0378	-	shikimate 5-dehydrogenase
379	 26.28	-2	423223..424059	+	278	21909915	-	SpyM3_0379	-	hypothetical protein
380	 34.01	-1	424061..424795	+	244	21909916	-	SpyM3_0380	-	hypothetical protein
381	 30.70	-2	424788..425774	+	328	21909917	-	SpyM3_0381	-	hypothetical protein
382	 29.67	-2	425784..426983	+	399	21909918	-	SpyM3_0382	-	S-adenosylmethionine synthetase
383	 29.10	-2	426967..427935	+	322	21909919	-	SpyM3_0383	-	hypothetical protein
384	 28.48	-2	427990..428979	+	329	21909920	-	SpyM3_0384	-	hypothetical protein
385	 30.22	-2	429671..430828	+	385	21909921	-	SpyM3_0385	-	UDP-glucose 6-dehydrogenase
386	 30.36	-2	430946..432121	+	391	21909922	-	SpyM3_0386	-	putative efflux protein
387	 31.43	-1	432224..432433	-	69	21909923	-	SpyM3_0387	-	hypothetical protein
388	 39.52	0	432423..432713	-	96	21909924	-	SpyM3_0388	-	hypothetical protein
389	 36.25	0	432710..434080	-	456	21909925	-	SpyM3_0389	-	hypothetical protein
390	 34.20	-1	434071..434301	-	76	21909926	-	SpyM3_0390	-	hypothetical protein
391	 37.58	0	434301..435194	-	297	21909927	-	SpyM3_0392	-	hypothetical protein
392	 47.46	+2	435210..435386	+	58	21909928	-	SpyM3_0391	-	hypothetical protein
393	 37.95	0	435442..435744	+	100	21909929	-	SpyM3_0393	-	hypothetical protein
394	 38.56	0	435744..436049	+	101	21909930	-	SpyM3_0394	-	hypothetical protein
395	 24.37	-2	436504..436860	+	118	21909931	-	SpyM3_0395	-	hypothetical protein
396	 25.00	-2	436974..437273	+	99	21909932	-	SpyM3_0396	-	hypothetical protein
397	 33.71	-1	437648..438451	-	267	21909933	-	SpyM3_0397	-	transposase TnpA
398	 36.76	0	438499..438819	-	106	21909934	-	SpyM3_0398	-	transposase TnpA (fragment)
399	 39.97	0	439079..439876	+	265	21909935	-	SpyM3_0399	-	hypothetical protein
400	 42.91	+1	439880..440704	+	274	21909936	-	SpyM3_0400	-	hypothetical protein
401	 43.46	+1	440704..442254	+	516	21909937	ftsY	SpyM3_0401	-	putative signal recognition particle-docking protein FtsY
402	 39.11	0	442308..443675	-	455	21909938	-	SpyM3_0402	-	putative drug resistance protein (transporter)
403	 35.82	0	444003..444845	+	280	21909939	bglG	SpyM3_0403	-	putative transcription antiterminator
404	 43.32	+1	444847..446709	+	620	21909940	-	SpyM3_0404	-	PTS system, beta-glucoside-specific IIABC component
405	 41.68	0	446728..448152	+	474	21909941	bglA.1	SpyM3_0405	-	6-phospho-beta-glucosidase
406	 40.32	0	448251..449066	-	271	21909942	-	SpyM3_0406	-	hypothetical protein
407	 40.42	0	449066..449968	-	300	21909943	-	SpyM3_0407	-	hypothetical protein
408	 34.85	-1	450102..450299	+	65	21909944	-	SpyM3_0408	-	hypothetical protein
409	 43.18	+1	450505..452637	+	710	21909945	-	SpyM3_0409	-	putative transcriptional regulator
410	 42.24	0	452579..453061	+	160	21909946	-	SpyM3_0410	-	hypothetical protein
411	 42.49	+1	453125..453397	+	90	21909947	-	SpyM3_0411	-	hypothetical protein
412	 39.78	0	453702..454694	+	330	161485753	ptsK	SpyM3_0412	-	HPr kinase/phosphorylase
413	 36.79	0	454691..455470	+	259	21909949	lgt	SpyM3_0413	-	prolipoprotein diacylglyceryl transferase
414	 32.84	-1	455492..455899	+	135	21909950	-	SpyM3_0414	-	hypothetical protein
415	 35.90	0	455892..456320	+	142	21909951	-	SpyM3_0415	-	hypothetical protein
416	 36.49	0	456480..456764	-	94	21909952	-	SpyM3_0416	-	hypothetical protein
417	 39.27	0	456963..457889	+	308	21909953	-	SpyM3_0417	-	putative protease
418	 44.91	+1	457991..459277	+	428	21909954	-	SpyM3_0418	-	putative protease
419	 39.44	0	459487..459699	+	70	21909955	-	SpyM3_0419	-	hypothetical protein
420	 42.17	0	460078..461571	-	497	21909956	lysS	SpyM3_0420	-	lysyl-tRNA synthetase
421	 38.87	0	461745..462647	+	300	21909957	-	SpyM3_0421	-	hypothetical protein
422	 39.58	0	462755..463378	-	207	21909958	-	SpyM3_0422	-	hypothetical protein
423	 37.71	0	463719..464198	-	159	21909959	-	SpyM3_0423	-	putative transcriptional regulator
424	 40.07	0	464288..464851	-	187	21909960	-	SpyM3_0424	-	hypothetical protein
425	 36.16	0	465120..465968	-	282	21909961	-	SpyM3_0425	-	N-acetylmuramoyl-L-alanine amidase
426	 40.87	0	466293..466796	+	167	21909962	-	SpyM3_0426	-	hypothetical protein
427	 36.72	0	466780..467163	+	127	21909963	-	SpyM3_0427	-	hypothetical protein
428	 39.58	0	467209..467688	-	159	21909964	-	SpyM3_0428	-	putative glutathione peroxidase
429	 41.78	0	467681..469480	-	599	21909965	pepF	SpyM3_0429	-	putative oligoendopeptidase F
430	 39.23	0	469640..472438	+	932	21909966	ppc	SpyM3_0430	-	phosphoenolpyruvate carboxylase
431	 36.55	0	472608..473882	+	424	21909967	ftsW	SpyM3_0431	-	putative cell division protein
432	 43.53	+1	474237..475433	+	398	21909968	tuf	SpyM3_0432	-	elongation factor Tu
433	 42.29	0	475674..476432	+	252	21909969	tpiA	SpyM3_0433	-	triosephosphate isomerase
434	 36.00	0	476531..477766	-	411	21909970	murN	SpyM3_0434	-	putative peptidoglycan branched peptide synthesis protein, alanine adding enzyme
435	 39.53	0	477753..478979	-	408	21909971	murM.1	SpyM3_0435	-	putative peptidoglycan branched peptide synthesis protein, serine/alanine adding enzyme
436	 40.74	0	478979..479788	-	269	21909972	-	SpyM3_0436	-	hypothetical protein
437	 39.74	0	479938..480171	-	77	21909973	-	SpyM3_0437	-	hypothetical protein
438	 41.01	0	480243..481544	-	433	21909974	-	SpyM3_0438	-	hypothetical protein
38.60	MEAN

3.72	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.