IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS315



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.60 STD DEV: 3.72
Streptococcus pyogenes MGAS315, complete genome - 1..1900521
1865 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
255	 37.89	0	297775..298257	+	160	21909791	greA	SpyM3_0255	-	transcription elongation factor GreA
256	 40.15	0	298881..299804	-	307	21909792	-	SpyM3_0256	-	OxaA-like protein precursor
257	 37.28	0	299886..300164	-	92	21909793	-	SpyM3_0257	-	putative acylphosphate phosphohydrolase
258	 42.14	0	300424..301161	+	245	21909794	-	SpyM3_0258	-	23S rRNA methyltransferase
259	 40.30	0	301227..301700	+	157	21909795	-	SpyM3_0259	-	hypothetical protein
260	 36.81	0	301715..302404	+	229	21909796	-	SpyM3_0260	-	hypothetical protein
261	 36.63	0	302582..302824	+	80	21909797	-	SpyM3_0261	-	hypothetical protein
262	 40.25	0	303002..303796	+	264	21909798	glr	SpyM3_0262	-	glutamate racemase
263	 41.95	0	303793..304779	+	328	21909799	-	SpyM3_0263	-	fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein
264	 39.27	0	304758..305279	+	173	21909800	-	SpyM3_0264	-	putative phosphoesterase
265	 34.20	-1	305276..305737	+	153	21909801	-	SpyM3_0265	-	CBS domain containing protein
266	 32.66	-1	305734..306480	+	248	21909802	xerD	SpyM3_0266	-	site-specific tyrosine recombinase XerD-like protein
267	 35.18	0	306480..307184	+	234	21909803	scpA	SpyM3_0267	-	segregation and condensation protein A
268	 38.22	0	307181..307732	+	183	21909804	scpB	SpyM3_0268	-	segregation and condensation protein B
269	 39.42	0	307852..308574	+	240	21909805	-	SpyM3_0269	-	putative ribosomal large subunit pseudouridine synthase
270	 34.47	-1	308571..308834	+	87	21909806	-	SpyM3_0270	-	hypothetical protein
271	 37.34	0	309012..309560	+	182	21909807	-	SpyM3_0271	-	23S rRNA methyltransferase
272	 31.56	-1	309870..310433	+	187	21909808	-	SpyM3_0272	-	hypothetical protein
273	 34.10	-1	310435..311088	+	217	21909809	-	SpyM3_0273	-	putative phosphatase
274	 38.76	0	311381..312301	+	306	21909810	-	SpyM3_0274	-	hypothetical protein
275	 40.54	0	312340..312894	+	184	21909811	-	SpyM3_0275	-	SAM-dependent methyltransferase
276	 38.95	0	313027..314361	+	444	21909812	hlyX	SpyM3_0276	-	putative hemolysin
277	 38.13	0	314439..315230	+	263	21909813	pflC	SpyM3_0277	-	putative pyruvate formate-lyase activating enzyme
278	 40.34	0	315355..316296	+	313	21909814	-	SpyM3_0278	-	putative manganese-dependent inorganic pyrophosphatase
279	 39.91	0	316372..317025	+	217	21909815	-	SpyM3_0279	-	hypothetical protein
280	 39.12	0	317070..318071	-	333	21909816	fhuG.1	SpyM3_0280	-	putative ferrichrome ABC transporter (permease)
281	 42.07	0	318068..319120	-	350	21909817	fhuB	SpyM3_0281	-	putative ferrichrome ABC transporter (permease)
282	 37.51	0	319110..320042	-	310	21909818	fhuD.1	SpyM3_0282	-	putative ferrichrome ABC transporter (ferrichrome-binding protein)
283	 39.34	0	320068..320850	-	260	21909819	fhuC.1	SpyM3_0283	-	putative ferrichrome ABC transporter ATP-binding protein
284	 41.36	0	321096..322541	-	481	21909820	murE	SpyM3_0284	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
285	 40.12	0	322629..324263	+	544	21909821	-	SpyM3_0285	-	putative polysaccharide biosynthesis protein
286	 40.95	0	324431..325060	+	209	21909822	upp	SpyM3_0286	-	uracil phosphoribosyltransferase
287	 42.13	0	325283..325873	+	196	21909823	clpP	SpyM3_0287	-	ATP-dependent Clp protease proteolytic subunit
288	 33.33	-1	326365..326640	+	91	21909824	-	SpyM3_0288	-	hypothetical protein
289	 41.67	0	326889..327524	+	211	21909825	tdk	SpyM3_0289	-	thymidylate kinase
290	 39.38	0	327542..328417	+	291	21909826	-	SpyM3_0290	-	DNA polymerase III subunit delta'
291	 33.02	-1	329081..329404	+	107	21909827	-	SpyM3_0291	-	DNA replication intiation control protein YabA
292	 42.25	0	329409..330272	+	287	21909828	-	SpyM3_0292	-	putative tetrapyrrole methylase family protein
293	 36.13	0	330299..330691	+	130	21909829	-	SpyM3_0293	-	hypothetical protein
294	 45.40	+1	330738..331367	-	209	21909830	-	SpyM3_0294	-	putative copper homeostasis protein
295	 40.34	0	331665..332021	+	118	21909831	-	SpyM3_0295	-	putative arsenate reductase
296	 43.12	+1	332095..332922	-	275	21909832	exoA	SpyM3_0296	-	putative 3'-exo-deoxyribonuclease
297	 42.13	0	333160..334341	+	393	21909833	lctO	SpyM3_0297	-	L-lactate oxidase
298	 41.67	0	334685..339553	+	1622	21909834	prtS	SpyM3_0298	-	putative cell envelope proteinase
299	 40.57	0	340301..341032	+	243	21909835	-	SpyM3_0299	-	hypothetical protein
300	 44.19	+1	341275..343272	+	665	21909836	metG	SpyM3_0300	-	methionyl-tRNA synthetase
301	 43.20	+1	343766..344779	+	337	21909837	nrdF	SpyM3_0301	-	ribonucleotide-diphosphate reductase subunit beta
302	 41.72	0	344783..345271	+	162	21909838	nrdI	SpyM3_0302	-	ribonucleotide reductase stimulatory protein
303	 45.67	+1	345238..347418	+	726	21909839	nrdE.2	SpyM3_0303	-	ribonucleotide-diphosphate reductase subunit alpha
304	 51.13	+2	347580..348332	-	250	21909840	-	SpyM3_0304	-	hypothetical protein
305	 41.78	0	348790..349215	+	141	21909841	-	SpyM3_0305	-	hypothetical protein
306	 47.62	+2	349406..349657	+	83	21909842	-	SpyM3_0306	-	hypothetical protein
307	 34.27	-1	349822..350352	-	176	21909843	-	SpyM3_0307	-	hypothetical protein
308	 42.62	+1	350711..350947	+	78	21909844	-	SpyM3_0308	-	hypothetical protein
309	 44.21	+1	350940..351638	+	232	21909845	fabG	SpyM3_0309	-	3-ketoacyl-(acyl-carrier-protein) reductase
310	 41.98	0	351714..352673	+	319	21909846	-	SpyM3_0310	-	NAD-dependent oxidoreductase
311	 42.30	0	353006..354343	+	445	21909847	glpT	SpyM3_0311	-	putative glycerol-3-phosphate transporter
312	 43.17	+1	354516..355898	+	460	21909848	glmU	SpyM3_0312	-	putative UDP-N-acetylglucosamine pyrophosphorylase
313	 40.54	0	355929..356483	+	184	21909849	-	SpyM3_0313	-	hypothetical protein
314	 36.51	0	356483..356734	+	83	21909850	-	SpyM3_0314	-	hypothetical protein
315	 42.67	+1	356754..357449	+	231	21909851	pfs	SpyM3_0315	-	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase
316	 36.84	0	357600..357941	+	113	21909852	-	SpyM3_0316	-	hypothetical protein
317	 40.28	0	358040..358687	-	215	21909853	-	SpyM3_0317	-	putative metal-dependent transcriptional regulator
318	 35.31	0	358857..359765	+	302	21909854	mtsA	SpyM3_0318	-	putative metal binding protein of ABC transporter
319	 37.33	0	359829..360554	+	241	21909855	mtsB	SpyM3_0319	-	ABC transporter ATP-binding protein
320	 37.43	0	360555..361409	+	284	21909856	mtsC	SpyM3_0320	-	integral membrane protein MtsC, ABC transporter (permease protein)
321	 39.41	0	361557..362363	-	268	21909857	cypB	SpyM3_0321	-	putative peptidyl-prolyl cis-trans isomerase
322	 40.53	0	362667..364985	+	772	21909858	-	SpyM3_0322	-	putative cell division protein
323	 33.62	-1	365056..365406	-	116	21909859	-	SpyM3_0323	-	hypothetical protein
324	 41.31	0	365653..366078	+	141	21909860	rplK	SpyM3_0324	-	50S ribosomal protein L11
325	 41.88	0	366184..366873	+	229	21909861	rplA	SpyM3_0325	-	50S ribosomal protein L1
326	 42.39	+1	367196..367924	+	242	21909862	pyrH	SpyM3_0326	-	uridylate kinase
327	 39.96	0	367954..368511	+	185	21909863	frr	SpyM3_0327	-	ribosome recycling factor
328	 42.39	+1	368749..369477	+	242	21909864	-	SpyM3_0328	-	hypothetical protein
329	 42.16	0	369550..370059	+	169	21909865	msrA.2	SpyM3_0329	-	methionine sulfoxide reductase A
330	 35.19	0	370056..370271	+	71	21909866	-	SpyM3_0330	-	hypothetical protein
331	 44.87	+1	370427..371596	+	389	21909867	-	SpyM3_0331	-	hypothetical protein
332	 40.78	0	371911..373683	+	590	21909868	-	SpyM3_0332	-	67 kDa Myosin-crossreactive streptococcal antigen
333	 42.40	+1	373980..374894	+	304	21909869	phoH	SpyM3_0333	-	putative phosphate starvation-induced protein
334	 42.01	0	374940..375515	+	191	21909870	-	SpyM3_0334	-	hypothetical protein
335	 39.77	0	375644..376171	+	175	21909871	-	SpyM3_0335	-	putative metalloprotease
336	 36.52	0	376152..376559	+	135	21909872	dgk	SpyM3_0336	-	putative diacylglycerol kinase
337	 40.47	0	376679..377575	+	298	21909873	era	SpyM3_0337	-	GTP-binding protein Era
338	 40.61	0	377550..378071	+	173	21909874	-	SpyM3_0338	-	hypothetical protein
339	 41.39	0	379537..379809	+	90	21909875	-	SpyM3_0339	-	putative bacteriocin
340	 39.30	0	379822..380022	+	66	21909876	-	SpyM3_0340	-	hypothetical protein
341	 48.06	+2	380383..380511	+	42	21909877	-	SpyM3_0341	-	hypothetical protein
342	 29.79	-2	380561..380842	+	93	21909878	-	SpyM3_0342	-	hypothetical protein
343	 42.44	+1	381691..382755	+	354	21909879	-	SpyM3_0343	-	hypothetical protein
344	 40.85	0	382848..383246	+	132	21909880	-	SpyM3_0344	-	hypothetical protein
345	 36.67	0	383595..383864	-	89	21909881	-	SpyM3_0345	-	hypothetical protein
346	 36.79	0	384935..385801	+	288	21909882	mutR	SpyM3_0346	-	putative positive transcriptional regulator
347	 42.39	+1	385973..386800	+	275	21909883	fpg	SpyM3_0347	-	formamidopyrimidine-DNA glycosylase
348	 41.75	0	386797..387390	+	197	21909884	coaE	SpyM3_0348	-	dephospho-CoA kinase
349	 43.25	+1	387580..389082	+	500	21909885	-	SpyM3_0349	-	ATPase
350	 38.27	0	389204..390397	+	397	21909886	-	SpyM3_0350	-	putative multi-drug resistance efflux pump
351	 37.55	0	390586..390822	+	78	21909887	secG	SpyM3_0351	-	preprotein translocase subunit SecG
352	 41.31	0	390994..393249	+	751	21909888	vacB	SpyM3_0352	-	putative exoribonuclease R
353	 40.81	0	393252..393719	+	155	21909889	smpB	SpyM3_0353	-	SsrA-binding protein
354	 37.27	0	393734..394444	+	236	21909890	-	SpyM3_0354	-	putative glutamine cyclotransferase
38.60	MEAN

3.72	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.