IslandPathversion 1.0

IslandPath Analysis: Streptococcus pyogenes MGAS315



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 38.60 STD DEV: 3.72
Streptococcus pyogenes MGAS315, complete genome - 1..1900521
1865 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
136	 39.78	0	162560..162838	+	92	21909672	-	SpyM3_0136	-	PTS system, 3-keto-L-gulonate specific IIB component
137	 41.98	0	162961..163446	+	161	21909673	-	SpyM3_0137	-	PTS system, 3-keto-L-gulonate specific IIA component
138	 46.76	+2	163537..164199	+	220	21909674	ulaD	SpyM3_0138	-	3-keto-L-gulonate-6-phosphate decarboxylase
139	 41.90	0	164204..165067	+	287	21909675	-	SpyM3_0139	-	putative L-xylulose 5-phosphate 3-epimerase
140	 47.52	+2	165069..165773	+	234	21909676	araD	SpyM3_0140	-	L-ribulose-5-phosphate 4-epimerase
141	 36.98	0	166098..167744	+	548	21909677	-	SpyM3_0141	-	putative transcriptional regulator
142	 39.93	0	167997..169088	+	363	21909678	-	SpyM3_0142	-	putative L-ascorbate 6-phosphate lactonase
143	 42.11	0	169576..170772	+	398	21909679	opuAA	SpyM3_0143	-	putative glycine betaine/proline ABC transporter
144	 41.64	0	170830..172515	+	561	21909680	opuABC	SpyM3_0144	-	putative glycine-betaine binding permease protein
145	 42.30	0	172646..175288	+	880	21909681	polA.1	SpyM3_0145	-	DNA polymerase I
146	 42.76	+1	175475..175930	+	151	21909682	-	SpyM3_0146	-	hypothetical protein
147	 39.74	0	175982..176449	+	155	21909683	spf	SpyM3_0147	-	putative ferric uptake regulator
148	 35.53	0	176552..177415	-	287	21909684	-	SpyM3_0148	-	hypothetical protein
149	 43.04	+1	177634..178776	+	380	21909685	tgt	SpyM3_0149	-	queuine tRNA-ribosyltransferase
150	 41.99	0	178994..179305	+	103	21909686	-	SpyM3_0150	-	hypothetical protein
151	 40.00	0	179309..179848	+	179	21909687	-	SpyM3_0151	-	putative biotin synthase
152	 43.85	+1	179988..180767	+	259	21909688	-	SpyM3_0152	-	hypothetical protein
153	 45.35	+1	180767..181282	+	171	21909689	-	SpyM3_0153	-	putative cytidine/deoxycytidylate deaminase family protein
154	 37.51	0	181896..183116	-	406	21909690	-	SpyM3_0154	-	hypothetical protein
155	 27.80	-2	183529..184233	+	234	21909691	speG	SpyM3_0155	-	pyrogenic exotoxin G precursor
156	 41.56	0	184694..186043	+	449	21909692	pgi	SpyM3_0156	-	glucose-6-phosphate isomerase
157	 36.08	0	186392..187630	-	412	21909693	-	SpyM3_0157	-	putative regulatory protein RofA related
158	 31.84	-1	187633..187899	-	88	21909694	-	SpyM3_0158	-	putative regulatory protein
159	 37.80	0	188587..189258	+	223	21909695	-	SpyM3_0159	-	hypothetical protein
160	 38.33	0	189357..190256	-	299	21909696	hasC.2	SpyM3_0160	-	putative UDP-glucose pyrophosphorylase
161	 42.77	+1	190289..191305	-	338	21909697	gpsA	SpyM3_0161	-	NAD(P)H-dependent glycerol-3-phosphate dehydrogenase
162	 34.44	-1	191603..192052	+	149	21909698	-	SpyM3_0162	-	hypothetical protein
163	 38.49	0	192045..193751	+	568	21909699	-	SpyM3_0163	-	putative ABC transporter, ATP-binding/permease protein
164	 41.01	0	193754..195538	+	594	21909700	-	SpyM3_0164	-	putative ABC transporter ATP-binding/membrane spanning protein
165	 44.14	+1	195656..196423	+	255	21909701	-	SpyM3_0165	-	hypothetical protein
166	 42.95	+1	196533..196979	+	148	21909702	dut	SpyM3_0166	-	deoxyuridine 5'-triphosphate nucleotidohydrolase
167	 44.49	+1	197060..198421	+	453	21909703	radA	SpyM3_0167	-	DNA repair protein RadA
168	 46.99	+2	198610..199107	+	165	21909704	-	SpyM3_0168	-	hypothetical protein
169	 38.12	0	199238..199948	+	236	21909705	-	SpyM3_0169	-	hypothetical protein
170	 41.22	0	200131..201576	+	481	21909706	gltX	SpyM3_0170	-	glutamyl-tRNA synthetase
171	 33.18	-1	201971..203317	+	448	21909707	-	SpyM3_0171	-	putative histidine kinase
172	 31.09	-2	203314..203892	+	192	21909708	-	SpyM3_0172	-	putative histidine kinase
173	 33.19	-1	203913..204593	+	226	21909709	-	SpyM3_0173	-	putative histidine kinase
174	 35.76	0	204597..205337	+	246	21909710	-	SpyM3_0174	-	putative response regulator
175	 38.06	0	205877..206236	+	119	21909711	rnpA	SpyM3_0175	-	ribonuclease P
176	 40.46	0	206202..207029	+	275	21909712	-	SpyM3_0176	-	hypothetical protein
177	 41.42	0	207041..207955	+	304	21909713	-	SpyM3_0177	-	hypothetical protein
178	 44.44	+1	208270..208404	+	44	21909714	rpmH	SpyM3_0178	-	50S ribosomal protein L34
179	 44.96	+1	208678..209382	+	234	21909715	-	SpyM3_0179	-	N-acetylmannosamine-6-phosphate 2-epimerase
180	 39.94	0	209431..210489	+	352	21909716	-	SpyM3_0180	-	N-acetylneuraminate-binding protein
181	 36.56	0	210565..210750	+	61	21909717	-	SpyM3_0181	-	putative sugar transporter sugar binding lipoprotein
182	 39.10	0	210875..211741	+	288	21909718	-	SpyM3_0182	-	N-acetylneuraminate transport system permease protein
183	 41.28	0	211754..212584	+	276	21909719	-	SpyM3_0183	-	N-acetylneuraminate transport system permease protein
184	 39.06	0	212741..213403	+	220	21909720	-	SpyM3_0184	-	hypothetical protein
185	 43.50	+1	213415..214329	+	304	21909721	nanH	SpyM3_0185	-	N-acetylneuraminate lyase
186	 41.64	0	214351..215289	+	312	21909722	-	SpyM3_0186	-	putative glucose kinase
187	 38.63	0	215400..216230	-	276	21909723	-	SpyM3_0187	-	putative phosphosugar-binding transcriptional regulator
188	 42.68	+1	216419..217306	+	295	21909724	-	SpyM3_0188	-	hypothetical protein
189	 45.35	+1	217278..217868	+	196	21909725	-	SpyM3_0189	-	hypothetical protein
190	 42.04	0	217982..218854	+	290	21909726	ksgA	SpyM3_0190	-	dimethyladenosine transferase
191	 43.07	+1	219279..220151	+	290	161485754	-	SpyM3_0191	-	ribosome-associated GTPase
192	 43.89	+1	220161..220823	+	220	21909728	rpe	SpyM3_0192	-	ribulose-phosphate 3-epimerase
193	 40.92	0	220816..221448	+	210	21909729	-	SpyM3_0193	-	hypothetical protein
194	 41.12	0	221450..222721	+	423	21909730	-	SpyM3_0194	-	hypothetical protein
195	 39.83	0	222711..223649	+	312	21909731	cbf	SpyM3_0195	-	CMP-binding factor
196	 37.26	0	223916..224755	+	279	21909732	purR	SpyM3_0196	-	purine operon repressor
197	 39.32	0	224746..227367	+	873	21909733	prgA	SpyM3_0197	-	putative surface exclusion protein
198	 43.96	+1	227575..227988	+	137	21909734	rpsL	SpyM3_0198	-	30S ribosomal protein S12
199	 43.74	+1	228009..228479	+	156	21909735	rpsG	SpyM3_0199	-	30S ribosomal protein S7
200	 42.91	+1	228964..231042	+	692	21909736	fusA	SpyM3_0200	-	elongation factor G
201	 41.25	0	231383..232393	+	336	21909737	plr	SpyM3_0201	-	glyceraldehyde-3-phosphate dehydrogenase
202	 40.76	0	232877..233617	-	246	21909738	-	SpyM3_0202	-	putative amino acid ABC transporter ATP-binding protein
203	 42.70	+1	233610..235178	-	522	21909739	-	SpyM3_0203	-	putative glutamine-binding periplasmic protein
204	 40.65	0	235376..237301	+	641	21909740	-	SpyM3_0204	-	hypothetical protein
205	 37.26	0	237367..238206	+	279	21909741	uppP	SpyM3_0205	-	undecaprenyl pyrophosphate phosphatase
206	 37.10	0	238424..239113	+	229	21909742	mecA	SpyM3_0206	-	adaptor protein
207	 37.53	0	239171..240289	+	372	21909743	rgpG	SpyM3_0207	-	putative polysacharide biosynthesis protein
208	 41.12	0	240411..241181	+	256	21909744	-	SpyM3_0208	-	putative ABC transporter, ATP-binding protein
209	 42.68	+1	241276..242538	+	420	21909745	-	SpyM3_0209	-	hypothetical protein
210	 42.95	+1	242569..243795	+	408	21909746	-	SpyM3_0210	-	putative aminotransferase
211	 42.50	+1	243782..244261	+	159	21909747	-	SpyM3_0211	-	hypothetical protein
212	 40.38	0	244254..245672	+	472	21909748	-	SpyM3_0212	-	hypothetical protein
213	 37.14	0	245824..247005	-	393	21909749	-	SpyM3_0213	-	putative DD-carboxypeptidase
214	 35.69	0	247173..248405	-	410	21909750	dacA	SpyM3_0214	-	putative D-alanyl-D-alanine carboxypeptidase
215	 40.28	0	248736..250706	+	656	21909751	oppA	SpyM3_0215	-	oligopeptide permease
216	 36.93	0	250771..252273	+	500	21909752	oppB	SpyM3_0216	-	putative oligopeptide permease
217	 37.22	0	252273..253199	+	308	21909753	oppC	SpyM3_0217	-	putative oligopeptide permease
218	 39.96	0	253208..254278	+	356	21909754	oppD	SpyM3_0218	-	putative oligopeptide ABC transporter, ATP-binding protein
219	 37.77	0	254271..255194	+	307	21909755	oppF	SpyM3_0219	-	putative oligopeptide ABC transporter, ATP-binding protein
220	 37.45	0	261586..262071	+	161	21909756	comX.1	SpyM3_0220	-	putative transcriptional regulator ComX1
221	 38.13	0	262681..263097	+	138	21909757	-	SpyM3_0221	-	IS1548 transposase
222	 37.94	0	263078..263815	+	245	21909758	-	SpyM3_0222	-	IS1548 transposase
223	 36.75	0	263921..264505	+	194	21909759	-	SpyM3_0223	-	hypothetical protein
224	 37.98	0	264505..265623	+	372	21909760	-	SpyM3_0224	-	GTP-binding protein YqeH
225	 34.30	-1	265648..265956	+	102	21909761	-	SpyM3_0225	-	hypothetical protein
226	 39.34	0	266025..266657	+	210	21909762	nadD	SpyM3_0226	-	nicotinic acid mononucleotide adenylyltransferase
227	 40.40	0	266654..267247	+	197	21909763	-	SpyM3_0227	-	hypothetical protein
228	 38.62	0	267247..267624	+	125	21909764	-	SpyM3_0228	-	iojap protein family
229	 38.98	0	267672..268415	+	247	21909765	-	SpyM3_0229	-	hypothetical protein
230	 36.13	0	268637..269743	+	368	21909766	-	SpyM3_0230	-	hypothetical protein
231	 38.63	0	270225..270941	+	238	21909767	-	SpyM3_0231	-	hypothetical protein
232	 38.55	0	271144..271986	+	280	21909768	atmA	SpyM3_0232	-	ABC transporter substrate-binding protein
233	 36.88	0	272310..273155	+	281	21909769	atmB	SpyM3_0233	-	ABC transporter substrate-binding protein
234	 39.15	0	273405..274469	+	354	21909770	atmD	SpyM3_0234	-	ABC transporter ATP-binding protein
235	 37.09	0	274470..275162	+	230	21909771	atmE	SpyM3_0235	-	ABC transporter permease
38.60	MEAN

3.72	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.