version 1.0
Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 918 41.90 0 990391..991032 - 213 116515408 - SPD_0976 - redox-sensing transcriptional repressor Rex 919 40.08 0 991115..991366 - 83 116516287 - SPD_0977 - hypothetical protein 920 36.21 0 991338..991685 - 115 116515573 - SPD_0978 - hypothetical protein 921 42.92 0 991690..992805 - 371 116515455 - SPD_0979 - aminotransferase, class V 922 40.73 0 992815..993774 - 319 116517035 prs2 SPD_0980 - ribose-phosphate pyrophosphokinase 923 38.42 0 993887..994456 - 189 116516210 - SPD_0981 - hypothetical protein 924 40.18 0 994584..995255 + 223 116515750 - SPD_0982 - pyrophosphokinase family protein 925 41.39 0 995239..996057 + 272 116515865 ppnK SPD_0983 - inorganic polyphosphate/ATP-NAD kinase 926 40.91 0 996054..996950 + 298 116516162 - SPD_0984 - ribosomal large subunit pseudouridine synthase, RluD subfamily protein 927 43.38 0 996994..997968 + 324 116516290 eutD SPD_0985 - phosphotransacetylase 928 41.33 0 999729..1000028 - 99 116516611 - SPD_0987 - hypothetical protein 929 37.73 0 1000430..1001134 + 234 116516853 - SPD_0988 - hypothetical protein 930 38.41 0 1001316..1001630 + 104 116516747 rplU SPD_0989 - 50S ribosomal protein L21 931 42.03 0 1001646..1001990 + 114 116515440 - SPD_0990 - hypothetical protein 932 42.18 0 1002007..1002300 + 97 116515463 rpmA SPD_0991 - 50S ribosomal protein L27 933 42.69 0 1002646..1002816 - 56 116516406 - SPD_0992 - hypothetical protein 934 38.76 0 1002788..1002916 - 42 116516220 - SPD_0993 - hypothetical protein 935 37.47 0 1003253..1004170 + 305 116517107 ribF SPD_0994 - bifunctional riboflavin kinase/FMN adenylyltransferase 936 37.10 0 1004263..1005111 - 282 116516022 - SPD_0995 - hypothetical protein 937 38.69 0 1005253..1006092 + 279 116517176 - SPD_0996 - DegV family protein 938 40.58 0 1006198..1006473 + 91 116516205 hup SPD_0997 - DNA-binding protein HU 939 42.06 0 1006899..1008800 + 633 116516774 - SPD_0998 - ABC transporter, ATP-binding protein 940 37.04 0 1008803..1009666 + 287 116516782 - SPD_0999 - transcriptional regulator MutR, putative 941 37.32 0 1009746..1010924 + 392 116515698 - SPD_1000 - transporter, major facilitator family protein 942 44.00 0 1011017..1012975 + 652 116516470 ligA SPD_1001 - NAD-dependent DNA ligase LigA 943 41.01 0 1013087..1015366 + 759 116515362 pulA SPD_1002 - pullulanase, type I 944 28.16 -2 1015718..1015891 - 57 116515690 - SPD_1003 - hypothetical protein 945 41.96 0 1015910..1017334 + 474 116516523 gapN SPD_1004 - glyceraldehyde-3-phosphate dehydrogenase, NADP-dependent 946 40.69 0 1017799..1019727 + 642 116517137 glgB SPD_1005 - glycogen branching enzyme 947 40.94 0 1019717..1020859 + 380 116516326 glgC SPD_1006 - glucose-1-phosphate adenylyltransferase 948 38.33 0 1020849..1021988 + 379 116516261 glgD SPD_1007 - glucose-1-phosphate adenylyltransferase, GlgD subunit 949 40.73 0 1021985..1023418 + 477 116516483 glgA SPD_1008 - glycogen synthase 950 41.22 0 1024131..1025246 + 371 116515367 - SPD_1011 - glycerate kinase 951 35.12 -1 1025243..1025689 - 148 116517193 - SPD_1010 - hypothetical protein 952 43.14 0 1025853..1027157 + 434 116516768 eno SPD_1012 - phosphopyruvate hydratase 953 36.91 0 1027295..1027741 - 148 116515952 - SPD_1013 - integrase/recombinase, phage integrase family protein 954 37.32 0 1028138..1028488 - 116 116515851 - SPD_1014 - IS630-Spn1, transposase Orf1 955 43.00 0 1028989..1032288 + 1099 116516958 rexB SPD_1015 - ATP-dependent exonuclease RexB 956 43.41 0 1032285..1035935 + 1216 116515444 rexA SPD_1016 - exonuclease RexA 957 41.48 0 1036105..1037283 + 392 116517013 - SPD_1017 - hypothetical protein 958 39.09 0 1037492..1043383 + 1963 116516343 iga SPD_1018 - immunoglobulin A1 protease precursor 959 42.02 0 1043842..1044693 + 283 116515446 rbgA SPD_1019 - ribosomal biogenesis GTPase 960 41.28 0 1044680..1045459 + 259 116515974 rnhB SPD_1020 - ribonuclease HII 961 41.52 0 1045475..1047025 + 516 116517148 - SPD_1021 - voltage-gated chloride channel family protein 962 24.56 -2 1047218..1047331 - 37 116516962 - SPD_1022 - hypothetical protein 963 38.00 0 1047609..1048679 + 356 116516164 xerS SPD_1023 - site-specific tyrosine recombinase XerS 964 40.20 0 1048752..1049741 - 329 116516751 - SPD_1024 - lipoate-protein ligase, putative 965 42.76 0 1049805..1051490 - 561 116515652 lpdA SPD_1025 - dihydrolipoamide dehydrogenase 966 42.43 0 1051554..1052597 - 347 116515407 - SPD_1026 - dihydrolipoamide acetyltransferase 967 44.01 0 1052815..1053807 - 330 116516741 - SPD_1027 - acetoin dehydrogenase, E1 component, beta subunit, putative 968 43.24 0 1053823..1054791 - 322 116516204 acoA SPD_1028 - TPP-dependent acetoin dehydrogenase alpha-subunit 969 42.29 0 1054945..1056306 - 453 116517066 - SPD_1029 - MATE efflux family protein 970 43.81 0 1056591..1057859 - 422 116515810 pyrC SPD_1030 - dihydroorotase 971 44.09 0 1057872..1058336 - 154 116515668 mutX SPD_1031 - Mutator mutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (8-oxo-dGTPase) 972 43.73 0 1058346..1058999 - 217 116516721 ung SPD_1032 - uracil-DNA glycosylase 973 26.23 -2 1059135..1059782 - 215 116515370 - SPD_1033 - hypothetical protein 974 41.04 0 1059796..1060509 - 237 116516454 - SPD_1034 - hydrolase, haloacid dehalogenase-like family protein 975 37.74 0 1060967..1061125 - 52 116516248 - SPD_1035 - hypothetical protein 976 38.56 0 1061195..1061347 - 50 116516920 - SPD_1036 - hypothetical protein 977 41.34 0 1061769..1064303 - 844 116515840 - SPD_1037 - histidine triad protein 978 39.53 0 1064461..1066911 - 816 116517004 phpA SPD_1038 - pneumococcal histidine triad protein A precursor 979 43.54 0 1067166..1068899 - 577 116515883 ptsI SPD_1039 - phosphoenolpyruvate-protein phosphotransferase 980 41.67 0 1068905..1069168 - 87 116516713 ptsH SPD_1040 - phosphocarrier protein HPr 981 37.90 0 1069519..1069737 + 72 116516941 nrdH SPD_1041 - glutaredoxin-like protein NrdH 982 41.57 0 1069818..1071977 + 719 116516073 nrdE SPD_1042 - ribonucleotide-diphosphate reductase subunit alpha 983 41.02 0 1072165..1073127 + 320 116517162 nrdF SPD_1043 - ribonucleotide-diphosphate reductase subunit beta 984 34.78 -1 1073309..1074070 + 253 116516466 lacR2 SPD_1044 - lactose phosphotransferase system repressor 985 28.49 -2 1074340..1074525 - 61 116515662 - SPD_1045 - hypothetical protein 986 39.37 0 1074568..1075974 - 468 116516678 lacG-2 SPD_1046 - 6-phospho-beta-galactosidase 987 40.54 0 1076183..1077874 - 563 116515590 lacE-2 SPD_1047 - PTS system, lactose-specific IIBC components 988 43.08 0 1077874..1078191 - 105 116516599 lacF-2 SPD_1048 - PTS system, lactose-specific IIA component 989 35.72 0 1078227..1079063 - 278 116517211 lacT SPD_1049 - transcription antiterminator LacT 990 41.28 0 1079297..1080277 - 326 116516368 lacD SPD_1050 - tagatose 1,6-diphosphate aldolase 991 40.75 0 1080279..1081208 - 309 116516039 lacC SPD_1051 - tagatose-6-phosphate kinase 992 39.53 0 1081219..1081734 - 171 116517129 lacB SPD_1052 - galactose-6-phosphate isomerase subunit LacB 993 41.31 0 1081765..1082190 - 141 116515890 lacA SPD_1053 - galactose-6-phosphate isomerase subunit LacA 994 37.10 0 1082348..1082692 - 114 116516900 - SPD_1054 - hypothetical protein 995 40.26 0 1083671..1083973 - 100 116516547 - SPD_1057 - PTS system, IIB component, putative 996 39.22 0 1084667..1084819 + 50 116516787 - SPD_1059 - hypothetical protein 997 44.19 0 1084900..1086723 - 607 116516228 lepA SPD_1060 - GTP-binding protein LepA 998 43.76 0 1086802..1087530 - 242 116516467 - SPD_1061 - serine/threonine protein phosphatase 999 41.73 0 1087532..1089199 - 555 116516837 recN SPD_1062 - DNA repair protein RecN 1000 37.27 0 1089206..1089637 - 143 116515743 - SPD_1063 - transcriptional regulator of arginine metabolism expression, putative 1001 44.61 0 1089630..1090445 - 271 116516842 - SPD_1064 - hemolysin A, putative 1002 44.75 +1 1090438..1091313 - 291 116516004 ispA SPD_1065 - geranyltranstransferase 1003 40.85 0 1091310..1091522 - 70 116516524 xseB SPD_1066 - exodeoxyribonuclease VII small subunit 1004 43.25 0 1091500..1092840 - 446 116515460 xseA SPD_1067 - exodeoxyribonuclease VII large subunit 1005 43.97 0 1092968..1093606 - 212 116516339 udk SPD_1068 - uridine kinase 1006 40.92 0 1093714..1094016 - 100 116515672 - SPD_1069 - hypothetical protein 1007 44.94 +1 1094257..1095135 - 292 116515728 truB SPD_1070 - tRNA pseudouridine synthase B 1008 26.33 -2 1095236..1098421 - 1061 116516569 - SPD_1071 - hypothetical protein 1009 41.49 0 1098433..1099707 - 424 116515946 - SPD_1072 - hypothetical protein 1010 42.47 0 1099803..1100918 - 371 116516807 - SPD_1073 - O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 1011 38.21 0 1100940..1101062 - 40 116516884 - SPD_1074 - hypothetical protein 1012 40.73 0 1101210..1102007 - 265 116516152 - SPD_1075 - transporter, FNT family protein, putative 1013 32.53 -1 1102251..1102994 - 247 116515518 srtA SPD_1076 - sortase 1014 43.09 0 1102994..1105462 - 822 116516676 gyrA SPD_1077 - DNA gyrase subunit A 1015 41.84 0 1105656..1106642 + 328 116515602 ldh SPD_1078 - L-lactate dehydrogenase 1016 37.54 0 1107028..1110282 - 1084 116516375 - SPD_1079 - type II restriction endonuclease, putative 1017 34.99 -1 1110447..1112318 - 623 116515779 - SPD_1080 - type II restriction endonuclease, putative 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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