version 1.0
Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 612 41.43 0 669986..671146 + 386 116515756 livJ SPD_0652 - branched-chain amino acid ABC transporter, amino acid-binding protein 613 43.22 0 671414..672283 + 289 116515326 livH SPD_0653 - branched-chain amino acid ABC transporter, permease protein 614 40.75 0 672287..673243 + 318 116516639 livM SPD_0654 - branched-chain amino acid ABC transporter, permease protein 615 38.82 0 673243..674007 + 254 116516236 livG SPD_0655 - branched-chain amino acid ABC transporter, ATP-binding protein 616 41.35 0 674007..674717 + 236 116516439 livF SPD_0656 - branched-chain amino acid ABC transporter, ATP-binding protein 617 37.75 0 675131..675787 + 218 116516866 - SPD_0657 - acetoin utilization protein AcuB, putative 618 42.63 0 676001..676990 + 329 116516272 prfB SPD_0658 - peptide chain release factor 2 619 41.13 0 677008..677700 + 230 116515754 ftsE SPD_0659 - cell division ATP-binding protein FtsE 620 36.79 0 677693..678619 + 308 116516625 ftsX SPD_0660 - cell division ABC transporter, permease protein FtsX 621 41.31 0 678905..681085 + 726 116517154 exp5 SPD_0661 - PTS system, IIABC components 622 40.81 0 681137..681952 + 271 116516071 - SPD_0662 - hypothetical protein 623 40.48 0 682092..683435 + 447 116516888 - SPD_0663 - ATP-dependent RNA helicase, DEAD/DEAH box family protein 624 44.00 0 683650..684840 + 396 116515567 metK SPD_0664 - S-adenosylmethionine synthetase 625 42.74 0 685393..686328 + 311 116516687 pyrDa SPD_0665 - dihydroorotate dehydrogenase 1A 626 38.82 0 686362..687399 + 345 116515334 holA SPD_0666 - DNA polymerase III subunit delta 627 43.23 0 687572..688177 + 201 116515547 sodA SPD_0667 - superoxide dismutase, manganese-dependent 628 39.55 0 688334..688864 + 176 116516259 - SPD_0668 - hypothetical protein 629 42.45 0 688885..689970 + 361 116516867 - SPD_0669 - hypothetical protein 630 37.04 0 690008..690439 + 143 116515988 - SPD_0670 - hypothetical protein 631 44.03 0 690441..691982 + 513 116516136 - SPD_0671 - ABC transporter, ATP-binding protein 632 43.41 0 692039..692842 - 267 116516991 - SPD_0672 - peptidyl-prolyl cis-trans isomerase, cyclophilin-type 633 35.59 0 692926..693147 - 73 116516873 - SPD_0673 - hypothetical protein 634 39.93 0 694013..694285 + 90 116516029 rpsP SPD_0674 - 30S ribosomal protein S16 635 36.25 0 694305..694544 + 79 116515603 - SPD_0675 - hypothetical protein 636 35.20 -1 695121..695549 + 142 116516691 - SPD_0676 - hypothetical protein 637 33.33 -1 695550..695909 + 119 116516366 - SPD_0677 - hypothetical protein 638 40.27 0 695940..696458 + 172 116516249 rimM SPD_0678 - 16S rRNA-processing protein 639 42.92 0 696448..697167 + 239 116516895 trmD SPD_0679 - tRNA (guanine-N(1)-)-methyltransferase 640 37.76 0 697179..697517 + 112 116515795 - SPD_0680 - hypothetical protein 641 38.94 0 697548..697868 - 106 116516822 - SPD_0681 - hypothetical protein 642 39.81 0 697966..698181 + 71 116517047 - SPD_0683 - hypothetical protein 643 42.86 0 698178..698324 - 48 116516284 - SPD_0682 - hypothetical protein 644 44.51 0 698385..698921 - 178 116515429 - SPD_0684 - biotin synthase (BioY family protein), putative 645 43.95 0 699118..700464 - 448 116516716 gor SPD_0685 - glutathione reductase 646 42.50 0 700729..701928 + 399 116515711 - SPD_0686 - hypothetical protein 647 41.45 0 701912..702613 + 233 116515985 - SPD_0687 - ABC transporter ATP-binding protein 648 40.00 0 702615..703874 + 419 116516885 - SPD_0688 - hypothetical protein 649 42.29 0 703998..705995 + 665 116516229 metG SPD_0689 - methionyl-tRNA synthetase 650 41.15 0 706045..706236 + 63 116517058 - SPD_0690 - hypothetical protein 651 40.19 0 706326..706646 + 106 116515400 - SPD_0691 - hypothetical protein 652 37.44 0 706650..707525 + 291 116516712 - SPD_0692 - hypothetical protein 653 36.35 0 707540..708466 + 308 116515786 - SPD_0693 - oxidoreductase, aldo/keto reductase family protein 654 41.47 0 708545..708802 + 85 116516430 - SPD_0694 - hypothetical protein 655 44.78 +1 708795..709493 + 232 116515543 fabG SPD_0695 - 3-ketoacyl-(acyl-carrier-protein) reductase 656 39.38 0 709504..709983 + 159 116516157 - SPD_0696 - MutT/nudix family protein 657 32.92 -1 709991..710719 + 242 116516788 - SPD_0697 - acetyltransferase, GNAT family protein 658 35.52 0 710761..711630 + 289 116515919 - SPD_0698 - hypothetical protein 659 42.40 0 711605..712045 + 146 116516645 - SPD_0699 - hypothetical protein 660 44.29 0 712168..714714 + 848 116515610 pepN SPD_0700 - aminopeptidase N 661 37.25 0 714757..715497 + 246 116515465 ciaR SPD_0701 - DNA-binding response regulator CiaR 662 38.50 0 715487..716821 + 444 116516689 ciaH SPD_0702 - sensor histidine kinase CiaH 663 34.38 -1 716855..717142 - 95 116517218 - SPD_0703 - hypothetical protein 664 40.52 0 717141..718211 + 356 116516394 - SPD_0704 - hypothetical protein 665 40.23 0 718411..720861 + 816 116516668 - SPD_0705 - bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon 666 40.28 0 720898..722121 + 407 116515576 - SPD_0706 - rod shape-determining protein RodA, putative 667 43.60 0 722132..722686 + 184 116516953 - SPD_0707 - 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein, putative 668 37.41 0 722771..723334 + 187 116515873 - SPD_0708 - hydrolase, haloacid dehalogenase-like family protein 669 42.78 0 723349..725295 + 648 116516156 gyrB SPD_0709 - DNA gyrase subunit B 670 36.34 0 725377..727104 + 575 116516893 ezrA SPD_0710 - septation ring formation regulator EzrA 671 41.24 0 727898..728251 + 117 116515608 - SPD_0711 - hypothetical protein 672 38.82 0 728283..728792 + 169 116516414 - SPD_0712 - transposase family protein 673 37.00 0 729426..729725 - 99 116515822 - SPD_0714 - hypothetical protein 674 39.48 0 729890..730312 - 140 116515664 - SPD_0715 - MutT/nudix family protein 675 36.49 0 730405..730752 + 115 116517010 - SPD_0716 - IS630-Spn1, transposase Orf1 676 43.43 0 731477..733735 - 752 116516310 clpE SPD_0717 - ATP-dependent Clp protease ATP-binding subunit ClpE 677 41.56 0 733964..734194 - 76 116515533 - SPD_0718 - hypothetical protein 678 39.18 0 734384..735067 + 227 116516598 - SPD_0719 - amino acid ABC transporter, permease protein 679 43.27 0 735067..735801 + 244 116515734 - SPD_0720 - amino acid ABC transporter, ATP-binding protein 680 45.51 +1 735934..736812 + 292 116515868 folD SPD_0721 - methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase 681 43.87 0 736954..737826 + 290 116517034 - SPD_0722 - YjeF-like protein 682 44.01 0 738108..738791 + 227 116516446 rpiA SPD_0723 - ribose-5-phosphate isomerase A 683 42.33 0 738805..740016 + 403 116516348 deoB SPD_0724 - phosphopentomutase 684 44.20 0 740576..741385 + 269 116515467 - SPD_0726 - purine nucleoside phosphorylase 685 38.39 0 741861..742592 + 243 116516091 - SPD_0727 - hypothetical protein 686 39.22 0 742638..742841 + 67 116517195 - SPD_0728 - hypothetical protein 687 41.52 0 742866..743378 + 170 116516976 - SPD_0729 - hemolysin-related protein 688 42.48 0 744036..744746 + 236 116515621 deoD SPD_0730 - purine nucleoside phosphorylase 689 38.67 0 744769..745293 - 174 116516744 - SPD_0731 - topology modulation protein 690 38.40 0 745346..745582 - 78 116515680 rpsT SPD_0732 - 30S ribosomal protein S20 691 38.65 0 745650..746570 - 306 116515774 coaA SPD_0733 - pantothenate kinase 692 33.56 -1 746768..747208 + 146 116516378 - SPD_0734 - hypothetical protein 693 39.93 0 747415..748005 + 196 116516099 - SPD_0735 - methyltransferase small subunit 694 42.96 0 748002..749279 + 425 116516475 pdp SPD_0736 - pyrimidine-nucleoside phosphorylase 695 41.63 0 749297..749959 + 220 116517157 deoC SPD_0737 - deoxyribose-phosphate aldolase 696 41.54 0 749946..750335 + 129 116516117 cdd-1 SPD_0738 - cytidine deaminase 697 41.88 0 750425..751477 + 350 116516951 - SPD_0739 - membrane lipoprotein TmpC precursor 698 41.93 0 751621..753156 + 511 116515854 - SPD_0740 - sugar ABC transporter, ATP-binding protein 699 44.48 0 753149..754207 + 352 116515653 - SPD_0741 - sugar ABC transporter, permease protein, putative 700 42.74 0 754210..755166 + 318 116516674 - SPD_0742 - sugar ABC transporter, permease protein, putative 701 41.43 0 756641..757282 - 213 116515637 - SPD_0745 - putative glycerol-3-phosphate acyltransferase PlsY 702 45.16 +1 757418..759361 + 647 116516535 parE SPD_0746 - DNA topoisomerase IV subunit B 703 34.13 -1 759482..759607 + 41 116516296 - SPD_0747 - hypothetical protein 704 43.97 0 759772..762252 + 826 116515631 parC SPD_0748 - DNA topoisomerase IV subunit A 705 41.35 0 762382..763404 + 340 116516002 ilvE SPD_0749 - branched-chain amino acid aminotransferase 706 36.03 0 763460..764164 + 234 116515710 - SPD_0750 - hypothetical protein 707 37.39 0 764229..764918 + 229 116516266 - SPD_0751 - hypothetical protein 708 38.53 0 764915..765838 + 307 116517099 - SPD_0752 - hypothetical protein 709 39.07 0 765853..766497 + 214 116515464 pcp SPD_0753 - pyrrolidone-carboxylate peptidase 710 29.44 -2 766665..766895 + 76 116516313 - SPD_0754 - hypothetical protein 711 40.98 0 767268..768470 + 400 116515525 rpsA SPD_0757 - 30S ribosomal protein S1 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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