version 1.0
Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 464 46.59 +1 497698..498255 + 185 116517161 - SPD_0492 - acetyltransferase, GNAT family protein 465 28.56 -2 498257..499219 + 320 116515713 - SPD_0493 - hypothetical protein 466 46.27 +1 499231..501882 + 883 116516342 valS SPD_0494 - valyl-tRNA synthetase 467 33.60 -1 501952..502707 + 251 116516856 - SPD_0495 - hypothetical protein 468 38.43 0 502990..503793 + 267 116516013 - SPD_0496 - cell filamentation protein Fic-related protein 469 27.70 -2 504947..505159 - 70 116516401 - SPD_0499 - hypothetical protein 470 29.17 -2 508402..509241 + 279 116516805 licT SPD_0501 - transcription antiterminator Lict 471 34.15 -1 509259..511097 + 612 116515619 - SPD_0502 - PTS system, beta-glucosides-specific IIABC components 472 33.55 -1 511110..512525 + 471 116515964 bglA-2 SPD_0503 - 6-phospho-beta-glucosidase 473 45.37 +1 513117..514163 + 348 116516862 pheS SPD_0504 - phenylalanyl-tRNA synthetase subunit alpha 474 37.25 0 514163..514672 + 169 116516224 - SPD_0505 - acetyltransferase, GNAT family protein 475 45.82 +1 514749..517151 + 800 116517104 pheT SPD_0506 - phenylalanyl-tRNA synthetase subunit beta 476 34.53 -1 517219..518220 - 333 116515991 - SPD_0507 - hypothetical protein 477 44.57 0 518949..519215 + 88 116515852 - SPD_0509 - hypothetical protein 478 43.42 0 519476..521725 + 749 116516990 metE SPD_0510 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 479 43.83 0 521789..522655 + 288 116516593 metF SPD_0511 - 5,10-methylenetetrahydrofolate reductase 480 43.90 0 523226..525553 + 775 116515732 pnp SPD_0512 - polynucleotide phosphorylase/polyadenylase 481 48.87 +1 525569..526186 + 205 116516473 cysE SPD_0513 - serine O-acetyltransferase 482 39.77 0 526198..527082 + 294 116515456 - SPD_0514 - acetyltransferase, GNAT family protein 483 44.35 0 527164..528507 + 447 116517189 cysS SPD_0515 - cysteinyl-tRNA synthetase 484 46.25 +1 528500..528886 + 128 116515371 - SPD_0516 - hypothetical protein 485 43.73 0 528890..529774 + 294 116516580 - SPD_0517 - hypothetical protein 486 30.04 -2 529911..530366 + 151 116515354 - SPD_0518 - hypothetical protein 487 37.41 0 530363..530509 + 48 116516174 - SPD_0519 - hypothetical protein 488 41.95 0 530655..530828 + 57 116517009 - SPD_0520 - transposase, putative, truncation 489 40.06 0 531180..532457 + 425 116515844 vex1 SPD_0521 - ABC transporter, transmembrane protein Vexp1 490 39.35 0 532470..533117 + 215 116516662 vex2 SPD_0522 - ABC transporter, ATP-binding protein Vexp2 491 44.28 0 533169..534548 + 459 116515629 vex3 SPD_0523 - ABC transporter, transmembrane protein Vexp3 492 44.44 0 534860..535516 + 218 116516514 vncR SPD_0524 - DNA-binding response regulator VncR 493 43.42 0 535513..536841 + 442 116515343 vncS SPD_0525 - sensor histidine kinase VncS 494 43.88 0 536982..537863 + 293 116515860 fba SPD_0526 - fructose-bisphosphate aldolase 495 39.46 0 538184..539374 - 396 116515686 - SPD_0527 - oxidoreductase, putative 496 42.73 0 539632..540291 - 219 116516319 - SPD_0528 - amino acid ABC transporter, permease protein 497 43.95 0 540301..540978 - 225 116515469 - SPD_0529 - amino acid ABC transporter, permease protein 498 43.02 0 540991..541785 - 264 116516520 - SPD_0530 - amino acid ABC transporter, amino acid-binding protein 499 43.54 0 542831..545053 + 740 116517143 recJ SPD_0532 - single-stranded-DNA-specific exonuclease RecJ 500 43.50 0 545228..546889 + 553 116516084 - SPD_0533 - metallo-beta-lactamase superfamily protein 501 43.33 0 546958..547737 + 259 116516440 estA SPD_0534 - tributyrin esterase 502 36.94 0 547849..549069 + 406 116515318 murM/fibA SPD_0535 - serine/alanine-adding enzyme MurM 503 35.28 -1 549074..550306 + 410 116515311 fibB SPD_0536 - beta-lactam resistance factor 504 45.91 +1 550422..551081 + 219 116516355 - SPD_0537 - hypothetical protein 505 44.50 0 551121..552965 + 614 116515431 uvrC SPD_0538 - excinuclease ABC subunit C 506 42.81 0 552955..553788 + 277 116516068 - SPD_0539 - Ser/Thr protein phosphatase family protein 507 41.82 0 553970..554770 - 266 116517131 - SPD_0540 - amino acid ABC transporter, amino acid-binding protein, putative 508 42.24 0 554941..555546 + 201 116516933 - SPD_0541 - nitroreductase family protein 509 44.25 0 555559..556959 + 466 116515781 pepV SPD_0542 - dipeptidase PepV 510 44.39 0 557013..557591 + 192 116517025 - SPD_0543 - hypothetical protein 511 40.52 0 557755..557907 + 50 116515955 - SPD_0544 - hypothetical protein 512 38.52 0 557908..558042 + 44 116515508 - SPD_0545 - hypothetical protein 513 42.31 0 558213..559538 + 441 116516855 brnQ SPD_0546 - branched-chain amino acid transport system II carrier protein 514 45.38 +1 559742..560779 + 345 116516393 - SPD_0547 - hypothetical protein 515 42.06 0 560748..561251 + 167 116515557 - SPD_0548 - HIT family protein 516 42.54 0 561254..561970 + 238 116516570 - SPD_0549 - hypothetical protein 517 41.31 0 562279..562704 + 141 116515716 rplK SPD_0550 - 50S ribosomal protein L11 518 40.72 0 562912..563601 + 229 116515704 rplA SPD_0551 - 50S ribosomal protein L1 519 40.65 0 564193..564780 - 195 116515836 - SPD_0552 - hypothetical protein 520 30.00 -2 564746..565075 + 109 116516994 - SPD_0553 - hypothetical protein 521 43.61 0 566119..567111 + 330 116516037 - SPD_0554 - ABC transporter, ATP-binding protein 522 41.27 0 567113..567931 + 272 116516264 - SPD_0555 - hypothetical protein 523 39.44 0 567933..568718 + 261 116516906 - SPD_0556 - hypothetical protein 524 33.22 -1 569948..576382 + 2144 116516972 prtA SPD_0558 - cell wall-associated serine protease PrtA 525 35.85 0 577007..577483 + 158 116516145 - SPD_0559 - PTS system IIA component, putative 526 40.20 0 577521..577826 + 101 116516148 - SPD_0560 - PTS system, IIB component, putative 527 41.33 0 577874..579349 + 491 116517184 - SPD_0561 - PTS system, IIC component, putative 528 42.23 0 579654..586340 + 2228 116515472 bgaA SPD_0562 - beta-galactosidase precursor, putative 529 33.62 -1 587654..588007 - 117 116516317 - SPD_0564 - hypothetical protein 530 40.62 0 588105..588557 + 150 116515520 - SPD_0565 - hypothetical protein 531 42.95 0 588615..589061 + 148 116517049 - SPD_0566 - hypothetical protein 532 43.44 0 589039..589602 + 187 116516252 - SPD_0567 - hypothetical protein 533 38.82 0 589595..589849 + 84 116516269 - SPD_0568 - hypothetical protein 534 41.70 0 589861..591915 + 684 116516836 - SPD_0569 - sodium/hydrogen exchanger family protein 535 39.26 0 592094..592954 + 286 116516563 - SPD_0570 - ribonuclease BN, putative 536 41.49 0 593165..593875 + 236 116515707 ccdA-1 SPD_0571 - cytochrome c-type biogenesis protein CcdA 537 42.86 0 593895..594461 + 188 116517064 - SPD_0572 - thioredoxin family protein 538 42.74 0 594649..595584 + 311 116515600 msrAB2 SPD_0573 - bifunctional methionine sulfoxide reductase A/B protein 539 40.65 0 595852..596589 + 245 116516390 - SPD_0574 - DNA-binding response regulator 540 43.44 0 596586..598277 + 563 116515466 - SPD_0575 - sensor histidine kinase, putative 541 45.74 +1 598393..598956 + 187 116516627 - SPD_0576 - hypothetical protein 542 37.56 0 598978..604608 + 1876 116515780 zmpB SPD_0577 - zinc metalloprotease ZmpB 543 43.09 0 604678..606399 + 573 116516803 pabB SPD_0578 - para-aminobenzoate synthase, component I 544 38.38 0 606557..607546 + 329 116516626 - SPD_0579 - pneumococcal surface protein, putative 545 44.38 0 607682..608641 + 319 116517028 gki SPD_0580 - glucokinase 546 43.33 0 608738..609577 + 279 116516193 thyA SPD_0581 - thymidylate synthase 547 45.03 +1 609625..609795 - 56 116516058 - SPD_0582 - hypothetical protein 548 45.42 +1 609916..610800 + 294 116515353 miaA SPD_0583 - tRNA delta(2)-isopentenylpyrophosphate transferase 549 44.96 +1 610793..612031 + 412 116517076 hflX SPD_0584 - GTP-binding protein HflX 550 40.54 0 612024..612647 + 207 116516854 - SPD_0585 - hypothetical protein 551 45.27 +1 612662..613591 + 309 116516699 rnz SPD_0586 - ribonuclease Z 552 42.33 0 613612..614367 + 251 116515980 - SPD_0587 - oxidoreductase, short chain dehydrogenase/reductase family protein 553 44.17 0 614421..615389 - 322 116517096 - SPD_0588 - transcriptional regulator, putative 554 34.81 -1 615393..615662 + 89 116516426 - SPD_0589 - hypothetical protein 555 41.73 0 615662..616042 + 126 116515527 - SPD_0590 - rhodanese-like domain-containing protein 556 32.83 -1 616161..616358 + 65 116517051 - SPD_0591 - hypothetical protein 557 43.39 0 616398..617123 - 241 116516226 rsuA-2 SPD_0592 - ribosomal small subunit pseudouridine synthase A 558 43.81 0 617285..619126 + 613 116516567 - SPD_0593 - elongation factor Tu family protein 559 34.51 -1 619146..619400 + 84 116515475 - SPD_0594 - hypothetical protein 560 37.07 0 619716..620063 + 115 116516306 - SPD_0595 - hypothetical protein 561 37.69 0 620134..622155 + 673 116515430 - SPD_0596 - hypothetical protein 562 37.23 0 622157..622798 + 213 116516538 - SPD_0597 - ABC transporter, ATP-binding protein 563 44.35 0 622902..624254 + 450 116515762 murD SPD_0598 - UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0