version 1.0
Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 394 41.68 0 419643..421967 + 774 116517188 pflB SPD_0420 - formate acetyltransferase 395 31.61 -1 422334..422681 - 115 116516200 - SPD_0421 - hypothetical protein 396 32.28 -1 422879..423163 - 94 116515513 - SPD_0422 - hypothetical protein 397 33.82 -1 424598..425821 - 407 116517006 - SPD_0423 - ROK family protein 398 39.30 0 425989..427311 + 440 116515962 - SPD_0424 - PTS system, cellobiose-specific IIC component 399 34.13 -1 427313..429199 + 628 116515811 - SPD_0425 - hypothetical protein 400 36.23 0 429367..429711 + 114 116516902 lacF-1 SPD_0426 - PTS system, lactose-specific IIA component 401 35.03 -1 429721..431133 + 470 116516482 lacG-1 SPD_0427 - 6-phospho-beta-galactosidase 402 35.60 0 431202..432881 + 559 116515623 lacE-1 SPD_0428 - PTS system, lactose-specific IIBC components 403 43.68 0 433009..434448 - 479 116517119 - SPD_0429 - potassium uptake protein, Trk family protein 404 42.74 0 434452..435801 - 449 116515316 trkA SPD_0430 - potassium transporter peripheral membrane component 405 43.35 0 435990..436838 + 282 116517130 - SPD_0431 - hypothetical protein 406 42.08 0 436853..437401 + 182 116515998 - SPD_0432 - hypothetical protein 407 40.85 0 437408..437620 + 70 116516686 - SPD_0433 - hypothetical protein 408 43.14 0 437722..439404 + 560 116516811 - SPD_0434 - ABC transporter, ATP-binding protein 409 41.64 0 439389..440219 + 276 116516756 - SPD_0435 - hypothetical protein 410 41.47 0 440412..440915 + 167 116515392 - SPD_0436 - TrmH family RNA methyltransferase 411 40.60 0 441374..441937 + 187 116516407 - SPD_0437 - hypothetical protein 412 42.40 0 441927..442577 + 216 116517046 - SPD_0438 - PAP2 family protein 413 39.74 0 442605..442994 + 129 116517187 - SPD_0439 - hypothetical protein 414 40.22 0 442999..443448 + 149 116515870 - SPD_0440 - hypothetical protein 415 42.35 0 443576..444163 + 195 116516666 - SPD_0441 - DNA-directed RNA polymerase subunit delta 416 44.22 0 444553..446160 + 535 116515581 pyrG SPD_0442 - CTP synthetase 417 41.73 0 446719..448350 - 543 116515598 - SPD_0443 - Na/Pi-cotransporter II-related protein 418 41.54 0 448715..453622 + 1635 116516927 - SPD_0444 - endo-beta-N-acetylglucosaminidase, putative 419 43.44 0 453712..454908 + 398 116516585 pgk SPD_0445 - phosphoglycerate kinase 420 36.36 0 455044..455571 + 175 116515489 - SPD_0446 - hypothetical protein 421 42.30 0 455648..456004 + 118 116517159 - SPD_0447 - transcriptional regulator, MerR family protein 422 42.46 0 456041..457387 + 448 116516090 glnA SPD_0448 - glutamine synthetase, type I 423 35.51 0 457860..457997 + 45 116516122 - SPD_0449 - hypothetical protein 424 29.90 -2 458167..459447 + 426 116515880 - SPD_0451 - type I restriction-modification system, S subunit, putative 425 30.67 -2 459401..460000 - 199 116516954 - SPD_0450 - type I restriction-modification system, S subunit, putative 426 30.08 -2 460011..460808 - 265 116515761 - SPD_0452 - integrase/recombinase, phage integrase family protein 427 33.59 -1 460865..462433 - 522 116515523 hsdS SPD_0453 - type I restriction-modification system, S subunit 428 34.63 -1 462433..463896 - 487 116516554 hsdM SPD_0454 - type I restriction-modification system, M subunit 429 36.89 0 463909..466242 - 777 116515646 hsdR SPD_0455 - type I restriction-modification system, R subunit 430 31.34 -1 466615..466815 + 66 116516914 - SPD_0456 - hypothetical protein 431 35.10 -1 466850..467359 + 169 116515425 - SPD_0457 - hypothetical protein 432 43.77 0 467523..468557 + 344 116516738 hrcA SPD_0458 - heat-inducible transcription repressor 433 43.81 0 468584..469108 + 174 116517069 grpE SPD_0459 - heat shock protein GrpE 434 43.53 0 469588..471411 + 607 116516498 dnaK SPD_0460 - molecular chaperone DnaK 435 46.47 +1 472171..473289 + 372 116516829 dnaJ SPD_0461 - chaperone protein DnaJ 436 39.24 0 473624..473911 - 95 116516237 - SPD_0462 - hypothetical protein 437 43.07 0 473921..474331 - 136 116516377 - SPD_0463 - Hit-like protein involved in cell-cycle regulation, putative 438 45.08 +1 474399..475130 + 243 116515745 - SPD_0464 - ABC transporter, ATP-binding protein 439 42.95 0 475127..476176 + 349 116516576 - SPD_0465 - ABC transporter, permease protein, putative 440 43.94 0 476344..476673 - 109 116515782 - SPD_0466 - hypothetical protein 441 33.63 -1 476949..477287 + 112 116516604 blpS SPD_0467 - BlpS protein 442 42.55 0 477292..478029 + 245 116515330 blpR SPD_0468 - response regulator BlpR 443 37.51 0 478043..479383 + 446 116515327 blpH SPD_0469 - histidine kinase BlpH, putative 444 32.69 -1 479425..479580 - 51 116516214 blpC SPD_0470 - peptide pheromone BlpC 445 38.84 0 483721..484410 + 229 116516302 blpY SPD_0473 - immunity protein BlpY 446 35.47 0 484452..484685 + 77 116517135 - SPD_0474 - hypothetical protein 447 37.91 0 484836..485447 + 203 116515839 - SPD_0475 - CAAX amino terminal protease family protein 448 41.38 0 485608..486402 + 264 116516934 - SPD_0476 - hypothetical protein 449 42.45 0 486399..487034 + 211 116515622 trmB SPD_0477 - tRNA (guanine-N(7))-methyltransferase 450 42.92 0 487160..487639 + 159 116516675 - SPD_0478 - hypothetical protein 451 43.18 0 487683..488819 + 378 116515364 nusA SPD_0479 - transcription elongation factor NusA 452 42.86 0 488841..489134 + 97 116516304 - SPD_0480 - hypothetical protein 453 41.33 0 489127..489426 + 99 116515722 - SPD_0481 - hypothetical protein 454 44.83 +1 489443..492235 + 930 116516588 infB SPD_0482 - translation initiation factor IF-2 455 42.17 0 492486..492836 + 116 116515755 rbfA SPD_0483 - ribosome-binding factor A 456 38.60 0 493079..493894 + 271 116516405 - SPD_0484 - hypothetical protein 457 38.80 0 493896..494078 + 60 116515503 - SPD_0485 - hypothetical protein 458 30.50 -2 494075..494215 + 46 116515842 - SPD_0486 - hypothetical protein 459 43.90 0 494516..494761 + 81 116517210 - SPD_0487 - hypothetical protein 460 45.84 +1 494761..496095 + 444 116515574 - SPD_0488 - hypothetical protein 461 41.18 0 496105..496359 + 84 116516960 - SPD_0489 - hypothetical protein 462 40.66 0 496455..496850 + 131 116515740 - SPD_0490 - hypothetical protein 463 42.22 0 497262..497711 + 149 116516878 - SPD_0491 - hypothetical protein 464 46.59 +1 497698..498255 + 185 116517161 - SPD_0492 - acetyltransferase, GNAT family protein 465 28.56 -2 498257..499219 + 320 116515713 - SPD_0493 - hypothetical protein 466 46.27 +1 499231..501882 + 883 116516342 valS SPD_0494 - valyl-tRNA synthetase 467 33.60 -1 501952..502707 + 251 116516856 - SPD_0495 - hypothetical protein 468 38.43 0 502990..503793 + 267 116516013 - SPD_0496 - cell filamentation protein Fic-related protein 469 27.70 -2 504947..505159 - 70 116516401 - SPD_0499 - hypothetical protein 470 29.17 -2 508402..509241 + 279 116516805 licT SPD_0501 - transcription antiterminator Lict 471 34.15 -1 509259..511097 + 612 116515619 - SPD_0502 - PTS system, beta-glucosides-specific IIABC components 472 33.55 -1 511110..512525 + 471 116515964 bglA-2 SPD_0503 - 6-phospho-beta-glucosidase 473 45.37 +1 513117..514163 + 348 116516862 pheS SPD_0504 - phenylalanyl-tRNA synthetase subunit alpha 474 37.25 0 514163..514672 + 169 116516224 - SPD_0505 - acetyltransferase, GNAT family protein 475 45.82 +1 514749..517151 + 800 116517104 pheT SPD_0506 - phenylalanyl-tRNA synthetase subunit beta 476 34.53 -1 517219..518220 - 333 116515991 - SPD_0507 - hypothetical protein 477 44.57 0 518949..519215 + 88 116515852 - SPD_0509 - hypothetical protein 478 43.42 0 519476..521725 + 749 116516990 metE SPD_0510 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 479 43.83 0 521789..522655 + 288 116516593 metF SPD_0511 - 5,10-methylenetetrahydrofolate reductase 480 43.90 0 523226..525553 + 775 116515732 pnp SPD_0512 - polynucleotide phosphorylase/polyadenylase 481 48.87 +1 525569..526186 + 205 116516473 cysE SPD_0513 - serine O-acetyltransferase 482 39.77 0 526198..527082 + 294 116515456 - SPD_0514 - acetyltransferase, GNAT family protein 483 44.35 0 527164..528507 + 447 116517189 cysS SPD_0515 - cysteinyl-tRNA synthetase 484 46.25 +1 528500..528886 + 128 116515371 - SPD_0516 - hypothetical protein 485 43.73 0 528890..529774 + 294 116516580 - SPD_0517 - hypothetical protein 486 30.04 -2 529911..530366 + 151 116515354 - SPD_0518 - hypothetical protein 487 37.41 0 530363..530509 + 48 116516174 - SPD_0519 - hypothetical protein 488 41.95 0 530655..530828 + 57 116517009 - SPD_0520 - transposase, putative, truncation 489 40.06 0 531180..532457 + 425 116515844 vex1 SPD_0521 - ABC transporter, transmembrane protein Vexp1 490 39.35 0 532470..533117 + 215 116516662 vex2 SPD_0522 - ABC transporter, ATP-binding protein Vexp2 491 44.28 0 533169..534548 + 459 116515629 vex3 SPD_0523 - ABC transporter, transmembrane protein Vexp3 492 44.44 0 534860..535516 + 218 116516514 vncR SPD_0524 - DNA-binding response regulator VncR 493 43.42 0 535513..536841 + 442 116515343 vncS SPD_0525 - sensor histidine kinase VncS 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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