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Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 317 37.52 0 342548..343144 - 198 116515550 recU SPD_0337 - Holliday junction-specific endonuclease 318 35.98 0 343210..343737 + 175 116516898 - SPD_0338 - hypothetical protein 319 36.06 0 343807..344136 + 109 116515799 - SPD_0339 - hypothetical protein 320 44.04 0 344622..345779 + 385 116517216 - SPD_0341 - hypothetical protein 321 40.50 0 345792..347186 + 464 116516323 - SPD_0342 - hypothetical protein 322 43.02 0 347262..348686 + 474 116515453 gnd SPD_0343 - 6-phosphogluconate dehydrogenase 323 42.17 0 348698..349387 + 229 116516655 - SPD_0344 - DNA-binding response regulator 324 36.97 0 349485..350501 + 338 116515498 cbpC SPD_0345 - choline binding protein C 325 45.96 +1 350623..351501 + 292 116516899 mvk SPD_0346 - mevalonate kinase 326 43.71 0 351483..352436 + 317 116515775 mvaD SPD_0347 - diphosphomevalonate decarboxylase 327 43.45 0 352423..353430 + 335 116517118 mvaK2 SPD_0348 - phosphomevalonate kinase 328 44.02 0 353414..354424 + 336 116515768 fni SPD_0349 - isopentenyl pyrophosphate isomerase 329 39.20 0 354502..355200 + 232 116516981 - SPD_0350 - hypothetical protein 330 43.17 0 355197..356192 + 331 116515827 - SPD_0351 - sensor histidine kinase, putative 331 46.76 +1 356206..356838 + 210 116517140 - SPD_0352 - DNA-binding response regulator 332 36.73 0 356839..356985 + 48 116516086 - SPD_0353 - hypothetical protein 333 33.85 -1 357758..357952 + 64 116516504 - SPD_0355 - hypothetical protein 334 40.56 0 358922..359806 + 294 116515867 cbpF SPD_0357 - choline binding protein F 335 27.23 -2 360868..361080 - 70 116516093 - SPD_0359 - hypothetical protein 336 40.79 0 361289..363058 + 589 116515741 mtlA SPD_0360 - PTS system, mannitol-specific IIBC components 337 35.33 -1 363082..365037 + 651 116516824 - SPD_0361 - transcriptional regulator, putative 338 36.07 0 365039..365476 + 145 116515528 mtlA2 SPD_0362 - PTS system, mannitol-specific enzyme IIA 339 36.85 0 365538..366674 + 378 116516528 - SPD_0363 - mannitol-1-phosphate 5-dehydrogenase 340 35.96 0 367056..367169 + 37 116516231 - SPD_0364 - ABC-type polar amino acid transport system, ATPase component 341 41.04 0 367473..368756 + 427 116516755 tig SPD_0365 - trigger factor 342 44.66 +1 368804..371170 - 788 116515818 - SPD_0366 - helicase, RecD/TraA family protein 343 43.41 0 371404..372018 - 204 116515681 lepB SPD_0367 - signal peptidase I 344 45.02 +1 372030..372902 - 290 116516121 rnhC SPD_0368 - ribonuclease HIII 345 38.78 0 372980..373291 + 103 116516919 - SPD_0369 - hypothetical protein 346 42.44 0 373288..373836 + 182 116515394 - SPD_0370 - hypothetical protein 347 45.19 +1 373940..376276 + 778 116517220 - SPD_0371 - MutS2 family protein 348 45.43 +1 376618..377940 + 440 116515323 - SPD_0372 - sodium:alanine symporter family protein 349 43.53 0 378158..378706 + 182 116516508 - SPD_0373 - hypothetical protein 350 42.00 0 378816..379715 + 299 116516614 - SPD_0374 - exfoliative toxin, putative 351 44.16 0 379740..381014 - 424 116516325 serS SPD_0375 - seryl-tRNA synthetase 352 41.94 0 381227..381598 - 123 116516387 - SPD_0376 - hypothetical protein 353 42.64 0 381601..382965 - 454 116515794 - SPD_0377 - aspartate kinase 354 43.13 0 383290..384075 + 261 116516619 - SPD_0378 - enoyl-CoA hydratase 355 39.54 0 384169..384603 + 144 116516027 - SPD_0379 - transcriptional regulator, MarR family protein 356 43.18 0 384603..385577 + 324 116516000 fabH SPD_0380 - 3-oxoacyl-(acyl carrier protein) synthase III 357 35.56 0 385637..385861 + 74 116516846 acpP SPD_0381 - acyl carrier protein 358 44.10 0 385980..386954 + 324 116516513 fabK SPD_0382 - trans-2-enoyl-ACP reductase II 359 45.71 +1 386947..387867 + 306 116517048 fabD SPD_0383 - acyl-carrier-protein S-malonyltransferase 360 41.80 0 387901..388632 + 243 116515382 fabG SPD_0384 - 3-ketoacyl-(acyl-carrier-protein) reductase 361 42.39 0 388654..389889 + 411 116516059 fabF SPD_0385 - 3-oxoacyl-(acyl carrier protein) synthase II 362 43.00 0 389892..390377 + 161 116516115 accB SPD_0386 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 363 43.97 0 390374..390796 + 140 116516802 fabZ SPD_0387 - (3R)-hydroxymyristoyl-ACP dehydratase 364 42.84 0 390808..392175 + 455 116515928 accC SPD_0388 - acetyl-CoA carboxylase biotin carboxylase subunit 365 43.83 0 392212..393078 + 288 116515562 accD SPD_0389 - acetyl-CoA carboxylase subunit beta 366 45.31 +1 393075..393842 + 255 116515640 accA SPD_0390 - acetyl-CoA carboxylase subunit alpha 367 39.78 0 394001..394186 + 61 116515989 - SPD_0391 - hypothetical protein 368 37.09 0 394443..394655 + 70 116516823 - SPD_0392 - hypothetical protein 369 43.26 0 394953..395375 - 140 116516227 nusB SPD_0393 - transcription antitermination protein NusB 370 42.31 0 395368..395757 - 129 116516235 - SPD_0394 - hypothetical protein 371 41.00 0 395779..396339 - 186 116516179 efp SPD_0395 - elongation factor P 372 45.67 +1 396468..397910 - 480 116515626 gatB SPD_0396 - aspartyl/glutamyl-tRNA amidotransferase subunit B 373 45.33 +1 397910..399376 - 488 116516449 gatA SPD_0397 - aspartyl/glutamyl-tRNA amidotransferase subunit A 374 45.87 +1 399376..399678 - 100 116515845 gatC SPD_0398 - aspartyl/glutamyl-tRNA amidotransferase subunit C 375 45.76 +1 399891..401435 + 514 116516944 prfC SPD_0399 - peptide chain release factor 3 376 34.98 -1 401704..402189 + 161 116515588 - SPD_0400 - glycosyl transferase family protein 8, putative 377 39.15 0 402305..402493 + 62 116515847 rpmB SPD_0401 - 50S ribosomal protein L28 378 38.80 0 402650..403015 + 121 116516098 - SPD_0402 - hypothetical protein 379 43.47 0 403018..404685 + 555 116516992 - SPD_0403 - hypothetical protein 380 44.21 0 404886..406586 + 566 116516357 ilvB SPD_0404 - acetolactate synthase catalytic subunit 381 44.03 0 406579..407055 + 158 116515671 ilvH SPD_0405 - acetolactate synthase 3 regulatory subunit 382 40.27 0 407121..408143 + 340 116517155 ilvC SPD_0406 - ketol-acid reductoisomerase 383 33.71 -1 408220..408486 + 88 116515821 - SPD_0407 - hypothetical protein 384 30.53 -2 408724..409080 + 118 116515409 - SPD_0408 - hypothetical protein 385 41.09 0 409130..410380 + 416 116516499 ilvA SPD_0409 - threonine dehydratase 386 35.19 -1 411115..411330 + 71 116515593 - SPD_0410 - hypothetical protein 387 44.40 0 411439..412179 - 246 116516673 - SPD_0411 - amino acid ABC transporter, ATP-binding protein 388 42.53 0 412179..413744 - 521 116516213 - SPD_0412 - amino acid ABC transporter, amino acid-binding protein/permease protein 389 41.06 0 413882..415771 + 629 116516530 - SPD_0414 - hypothetical protein 390 30.25 -2 415768..415929 - 53 116517055 - SPD_0413 - hypothetical protein 391 40.19 0 417195..418040 + 281 116515636 bacA SPD_0417 - undecaprenyl pyrophosphate phosphatase 392 42.64 0 418033..418161 + 42 116516463 - SPD_0418 - hypothetical protein 393 40.68 0 418187..419248 - 353 116516092 dinP SPD_0419 - DNA polymerase IV 394 41.68 0 419643..421967 + 774 116517188 pflB SPD_0420 - formate acetyltransferase 395 31.61 -1 422334..422681 - 115 116516200 - SPD_0421 - hypothetical protein 396 32.28 -1 422879..423163 - 94 116515513 - SPD_0422 - hypothetical protein 397 33.82 -1 424598..425821 - 407 116517006 - SPD_0423 - ROK family protein 398 39.30 0 425989..427311 + 440 116515962 - SPD_0424 - PTS system, cellobiose-specific IIC component 399 34.13 -1 427313..429199 + 628 116515811 - SPD_0425 - hypothetical protein 400 36.23 0 429367..429711 + 114 116516902 lacF-1 SPD_0426 - PTS system, lactose-specific IIA component 401 35.03 -1 429721..431133 + 470 116516482 lacG-1 SPD_0427 - 6-phospho-beta-galactosidase 402 35.60 0 431202..432881 + 559 116515623 lacE-1 SPD_0428 - PTS system, lactose-specific IIBC components 403 43.68 0 433009..434448 - 479 116517119 - SPD_0429 - potassium uptake protein, Trk family protein 404 42.74 0 434452..435801 - 449 116515316 trkA SPD_0430 - potassium transporter peripheral membrane component 405 43.35 0 435990..436838 + 282 116517130 - SPD_0431 - hypothetical protein 406 42.08 0 436853..437401 + 182 116515998 - SPD_0432 - hypothetical protein 407 40.85 0 437408..437620 + 70 116516686 - SPD_0433 - hypothetical protein 408 43.14 0 437722..439404 + 560 116516811 - SPD_0434 - ABC transporter, ATP-binding protein 409 41.64 0 439389..440219 + 276 116516756 - SPD_0435 - hypothetical protein 410 41.47 0 440412..440915 + 167 116515392 - SPD_0436 - TrmH family RNA methyltransferase 411 40.60 0 441374..441937 + 187 116516407 - SPD_0437 - hypothetical protein 412 42.40 0 441927..442577 + 216 116517046 - SPD_0438 - PAP2 family protein 413 39.74 0 442605..442994 + 129 116517187 - SPD_0439 - hypothetical protein 414 40.22 0 442999..443448 + 149 116515870 - SPD_0440 - hypothetical protein 415 42.35 0 443576..444163 + 195 116516666 - SPD_0441 - DNA-directed RNA polymerase subunit delta 416 44.22 0 444553..446160 + 535 116515581 pyrG SPD_0442 - CTP synthetase 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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