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Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 280 39.07 0 295869..296687 + 272 116516087 - SPD_0297 - PTS system, IID component 281 37.41 0 296687..296980 + 97 162139312 yajC-1 SPD_0298 - preprotein translocase, YajC subunit 282 36.75 0 297002..297118 + 38 116516830 - SPD_0299 - hypothetical protein 283 40.46 0 297064..298902 + 612 116516834 - SPD_0300 - hypothetical protein 284 39.82 0 298962..299963 + 333 116515692 regR SPD_0301 - sugar binding transcriptional regulator RegR 285 32.10 -1 300409..300651 - 80 116516600 - SPD_0302 - hypothetical protein 286 44.10 0 300667..300861 - 64 116515521 - SPD_0303 - transcriptional regulator, putative 287 43.85 0 301027..301977 + 316 116515442 mraW SPD_0304 - S-adenosyl-methyltransferase MraW 288 35.85 0 301989..302306 + 105 116516218 ftsL SPD_0305 - cell division protein FtsL 289 42.57 0 302310..304562 + 750 116517037 pbpX SPD_0306 - penicillin-binding protein 2X 290 41.28 0 304564..305544 + 326 116515948 mraY SPD_0307 - phospho-N-acetylmuramoyl-pentapeptide-transferase 291 43.21 0 306101..308206 + 701 116515968 clpL SPD_0308 - ATP-dependent Clp protease, ATP-binding subunit 292 45.76 +1 308502..308984 - 160 116516199 luxS SPD_0309 - S-ribosylhomocysteinase 293 43.84 0 309079..310563 - 494 116516184 - SPD_0310 - hypothetical protein 294 42.48 0 310716..312323 + 535 116517011 dexB SPD_0311 - glucan 1,6-alpha-glucosidase 295 37.36 0 312482..312655 + 57 116516728 - SPD_0313 - hypothetical protein 296 38.45 0 313744..315189 + 481 116516963 cps2A SPD_0315 - integral membrane regulatory protein Cps2A 297 41.53 0 315191..315922 + 243 116516159 cps2B SPD_0316 - tyrosine-protein phosphatase CpsB 298 41.99 0 315931..316623 + 230 116517039 cps2C SPD_0317 - chain length determinant protein/polysaccharide export protein, MPA1 family protein 299 39.06 0 316633..317313 + 226 116517023 cps2D SPD_0318 - tyrosine-protein kinase Cps2D cytosolic ATPase 300 37.79 0 317328..318695 + 455 116516773 cps2E SPD_0319 - undecaprenylphosphate glucosephosphotransferase Cps2E 301 40.25 0 318727..319911 + 394 116516453 cps2T SPD_0320 - glycosyl transferase, group 1 family protein, putative 302 32.38 -1 319904..320848 + 314 116516251 cps2F SPD_0321 - glycosyl transferase, group 2 family protein 303 32.66 -1 320864..321910 + 348 116516693 cps2G SPD_0322 - glycosyl transferase, group 1 family protein 304 26.98 -2 321951..323114 + 387 116515655 csp2H SPD_0323 - polysaccharide polymerase 305 29.53 -2 323244..324401 + 385 116516743 cps2I SPD_0324 - glycosyl transferase, group 1 family protein, putative 306 26.38 -2 324398..325807 + 469 116516835 - SPD_0325 - hypothetical protein 307 36.56 0 325843..327081 + 412 116516033 cps2K SPD_0326 - UDP-glucose 6-dehydrogenase, putative 308 37.29 0 327110..327715 + 201 116517147 cps2P SPD_0327 - UDP-galactopyranose mutase 309 42.87 0 327793..328662 + 289 116516051 cps2L SPD_0328 - glucose-1-phosphate thymidylyltransferase 310 41.41 0 328663..329256 + 197 116517185 rfbC SPD_0329 - dTDP-4-dehydrorhamnose 3,5-epimerase, putative 311 42.29 0 329269..330318 + 349 116516812 rfbB SPD_0330 - dTDP-glucose 4,6-dehydratase 312 41.31 0 330384..331235 + 283 116515912 rfbD SPD_0331 - dTDP-4-dehydrorhamnose reductase 313 35.22 -1 332280..332438 + 52 116517053 - SPD_0333 - hypothetical protein 314 39.79 0 332640..334622 + 660 116515982 aliA SPD_0334 - oligopeptide ABC transporter, oligopeptide-binding protein AliA 315 42.70 0 334922..340225 + 1767 116515461 - SPD_0335 - cell wall surface anchor family protein 316 43.19 0 340392..342551 - 719 116516330 pbp1A SPD_0336 - penicillin-binding protein 1A 317 37.52 0 342548..343144 - 198 116515550 recU SPD_0337 - Holliday junction-specific endonuclease 318 35.98 0 343210..343737 + 175 116516898 - SPD_0338 - hypothetical protein 319 36.06 0 343807..344136 + 109 116515799 - SPD_0339 - hypothetical protein 320 44.04 0 344622..345779 + 385 116517216 - SPD_0341 - hypothetical protein 321 40.50 0 345792..347186 + 464 116516323 - SPD_0342 - hypothetical protein 322 43.02 0 347262..348686 + 474 116515453 gnd SPD_0343 - 6-phosphogluconate dehydrogenase 323 42.17 0 348698..349387 + 229 116516655 - SPD_0344 - DNA-binding response regulator 324 36.97 0 349485..350501 + 338 116515498 cbpC SPD_0345 - choline binding protein C 325 45.96 +1 350623..351501 + 292 116516899 mvk SPD_0346 - mevalonate kinase 326 43.71 0 351483..352436 + 317 116515775 mvaD SPD_0347 - diphosphomevalonate decarboxylase 327 43.45 0 352423..353430 + 335 116517118 mvaK2 SPD_0348 - phosphomevalonate kinase 328 44.02 0 353414..354424 + 336 116515768 fni SPD_0349 - isopentenyl pyrophosphate isomerase 329 39.20 0 354502..355200 + 232 116516981 - SPD_0350 - hypothetical protein 330 43.17 0 355197..356192 + 331 116515827 - SPD_0351 - sensor histidine kinase, putative 331 46.76 +1 356206..356838 + 210 116517140 - SPD_0352 - DNA-binding response regulator 332 36.73 0 356839..356985 + 48 116516086 - SPD_0353 - hypothetical protein 333 33.85 -1 357758..357952 + 64 116516504 - SPD_0355 - hypothetical protein 334 40.56 0 358922..359806 + 294 116515867 cbpF SPD_0357 - choline binding protein F 335 27.23 -2 360868..361080 - 70 116516093 - SPD_0359 - hypothetical protein 336 40.79 0 361289..363058 + 589 116515741 mtlA SPD_0360 - PTS system, mannitol-specific IIBC components 337 35.33 -1 363082..365037 + 651 116516824 - SPD_0361 - transcriptional regulator, putative 338 36.07 0 365039..365476 + 145 116515528 mtlA2 SPD_0362 - PTS system, mannitol-specific enzyme IIA 339 36.85 0 365538..366674 + 378 116516528 - SPD_0363 - mannitol-1-phosphate 5-dehydrogenase 340 35.96 0 367056..367169 + 37 116516231 - SPD_0364 - ABC-type polar amino acid transport system, ATPase component 341 41.04 0 367473..368756 + 427 116516755 tig SPD_0365 - trigger factor 342 44.66 +1 368804..371170 - 788 116515818 - SPD_0366 - helicase, RecD/TraA family protein 343 43.41 0 371404..372018 - 204 116515681 lepB SPD_0367 - signal peptidase I 344 45.02 +1 372030..372902 - 290 116516121 rnhC SPD_0368 - ribonuclease HIII 345 38.78 0 372980..373291 + 103 116516919 - SPD_0369 - hypothetical protein 346 42.44 0 373288..373836 + 182 116515394 - SPD_0370 - hypothetical protein 347 45.19 +1 373940..376276 + 778 116517220 - SPD_0371 - MutS2 family protein 348 45.43 +1 376618..377940 + 440 116515323 - SPD_0372 - sodium:alanine symporter family protein 349 43.53 0 378158..378706 + 182 116516508 - SPD_0373 - hypothetical protein 350 42.00 0 378816..379715 + 299 116516614 - SPD_0374 - exfoliative toxin, putative 351 44.16 0 379740..381014 - 424 116516325 serS SPD_0375 - seryl-tRNA synthetase 352 41.94 0 381227..381598 - 123 116516387 - SPD_0376 - hypothetical protein 353 42.64 0 381601..382965 - 454 116515794 - SPD_0377 - aspartate kinase 354 43.13 0 383290..384075 + 261 116516619 - SPD_0378 - enoyl-CoA hydratase 355 39.54 0 384169..384603 + 144 116516027 - SPD_0379 - transcriptional regulator, MarR family protein 356 43.18 0 384603..385577 + 324 116516000 fabH SPD_0380 - 3-oxoacyl-(acyl carrier protein) synthase III 357 35.56 0 385637..385861 + 74 116516846 acpP SPD_0381 - acyl carrier protein 358 44.10 0 385980..386954 + 324 116516513 fabK SPD_0382 - trans-2-enoyl-ACP reductase II 359 45.71 +1 386947..387867 + 306 116517048 fabD SPD_0383 - acyl-carrier-protein S-malonyltransferase 360 41.80 0 387901..388632 + 243 116515382 fabG SPD_0384 - 3-ketoacyl-(acyl-carrier-protein) reductase 361 42.39 0 388654..389889 + 411 116516059 fabF SPD_0385 - 3-oxoacyl-(acyl carrier protein) synthase II 362 43.00 0 389892..390377 + 161 116516115 accB SPD_0386 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 363 43.97 0 390374..390796 + 140 116516802 fabZ SPD_0387 - (3R)-hydroxymyristoyl-ACP dehydratase 364 42.84 0 390808..392175 + 455 116515928 accC SPD_0388 - acetyl-CoA carboxylase biotin carboxylase subunit 365 43.83 0 392212..393078 + 288 116515562 accD SPD_0389 - acetyl-CoA carboxylase subunit beta 366 45.31 +1 393075..393842 + 255 116515640 accA SPD_0390 - acetyl-CoA carboxylase subunit alpha 367 39.78 0 394001..394186 + 61 116515989 - SPD_0391 - hypothetical protein 368 37.09 0 394443..394655 + 70 116516823 - SPD_0392 - hypothetical protein 369 43.26 0 394953..395375 - 140 116516227 nusB SPD_0393 - transcription antitermination protein NusB 370 42.31 0 395368..395757 - 129 116516235 - SPD_0394 - hypothetical protein 371 41.00 0 395779..396339 - 186 116516179 efp SPD_0395 - elongation factor P 372 45.67 +1 396468..397910 - 480 116515626 gatB SPD_0396 - aspartyl/glutamyl-tRNA amidotransferase subunit B 373 45.33 +1 397910..399376 - 488 116516449 gatA SPD_0397 - aspartyl/glutamyl-tRNA amidotransferase subunit A 374 45.87 +1 399376..399678 - 100 116515845 gatC SPD_0398 - aspartyl/glutamyl-tRNA amidotransferase subunit C 375 45.76 +1 399891..401435 + 514 116516944 prfC SPD_0399 - peptide chain release factor 3 376 34.98 -1 401704..402189 + 161 116515588 - SPD_0400 - glycosyl transferase family protein 8, putative 377 39.15 0 402305..402493 + 62 116515847 rpmB SPD_0401 - 50S ribosomal protein L28 378 38.80 0 402650..403015 + 121 116516098 - SPD_0402 - hypothetical protein 379 43.47 0 403018..404685 + 555 116516992 - SPD_0403 - hypothetical protein 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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