version 1.0
Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1815 32.94 -1 1928905..1930935 - 676 116516429 - SPD_1961 - transcriptional regulator, BglG family protein 1816 41.07 0 1931126..1932133 + 335 116517201 - SPD_1962 - hypothetical protein 1817 41.53 0 1932488..1932670 + 60 116516063 rpmF SPD_1963 - 50S ribosomal protein L32 1818 38.00 0 1932686..1932835 + 49 116516908 rpmG SPD_1964 - 50S ribosomal protein L33 1819 32.65 -1 1933315..1935357 - 680 116515800 pcpA SPD_1965 - choline binding protein PcpA 1820 37.72 0 1935714..1936283 + 189 116516391 - SPD_1966 - IS1381, transposase OrfA 1821 37.69 0 1936309..1936698 + 129 116515349 - SPD_1967 - IS1381, transposase OrfB 1822 37.92 0 1936750..1937076 - 108 116516408 - SPD_1968 - hypothetical protein 1823 46.15 +1 1937402..1939282 - 626 116515878 - SPD_1969 - glycosyl hydrolase-related protein 1824 47.01 +1 1939276..1940145 - 289 116516983 - SPD_1970 - ROK family protein 1825 44.90 +1 1940229..1942874 - 881 116516168 - SPD_1971 - hypothetical protein 1826 46.14 +1 1942965..1944245 - 426 116517029 - SPD_1972 - hypothetical protein 1827 46.81 +1 1944416..1946500 + 694 116515902 - SPD_1973 - alpha-1,2-mannosidase, putative 1828 46.90 +1 1946540..1948219 - 559 116516956 - SPD_1974 - hypothetical protein 1829 42.28 0 1950271..1951287 + 338 116516173 argF SPD_1976 - ornithine carbamoyltransferase 1830 41.67 0 1951452..1952399 + 315 116517200 arcC SPD_1977 - carbamate kinase 1831 42.72 0 1952608..1954119 + 503 116516100 - SPD_1978 - hypothetical protein 1832 44.82 +1 1954141..1955472 + 443 116516441 - SPD_1979 - hypothetical protein 1833 30.93 -1 1955877..1956167 - 96 116516541 - SPD_1981 - hypothetical protein 1834 38.00 0 1956155..1956304 - 49 116516901 - SPD_1982 - hypothetical protein 1835 41.11 0 1956590..1956769 + 59 116515824 - SPD_1983 - hypothetical protein 1836 42.44 0 1956806..1957705 - 299 116516677 - SPD_1984 - hypersensitive-induced reaction protein 4 1837 41.23 0 1957835..1958986 - 383 116515561 - SPD_1985 - alcohol dehydrogenase, iron-containing 1838 42.22 0 1959132..1960898 - 588 116516456 fucI SPD_1986 - L-fucose isomerase 1839 34.14 -1 1960955..1964071 - 1038 116515536 - SPD_1987 - fucolectin-related protein 1840 33.42 -1 1964081..1966375 - 764 116517212 - SPD_1988 - hypothetical protein 1841 34.71 -1 1966434..1967234 - 266 116516146 - SPD_1989 - PTS system, IID component 1842 37.34 0 1967231..1968004 - 257 116516971 - SPD_1990 - PTS system, IIC component 1843 32.06 -1 1968029..1968499 - 156 116515959 - SPD_1991 - PTS system, IIB component 1844 32.88 -1 1968490..1968933 - 147 116517183 - SPD_1992 - PTS system, IIA component 1845 32.65 -1 1968914..1969354 - 146 116516128 fucU SPD_1993 - RbsD/FucU transport protein family protein 1846 36.78 0 1969366..1970004 - 212 116516769 fucA SPD_1994 - L-fuculose phosphate aldolase 1847 35.75 0 1970119..1971522 - 467 116516651 fucK SPD_1995 - L-fuculose kinase FucK, putative 1848 33.98 -1 1971698..1972471 + 257 116517134 - SPD_1996 - fucose operon repressor, putative 1849 42.63 0 1973600..1975105 - 501 116516060 adcA SPD_1997 - zinc ABC transporter, zinc-binding lipoprotein 1850 43.12 0 1975115..1975921 - 268 116516369 adcB SPD_1998 - zinc ABC transporter, permease protein 1851 45.11 +1 1975914..1976618 - 234 116516242 adcC SPD_1999 - zinc ABC transporter, ATP-binding protein 1852 42.40 0 1976618..1977058 - 146 116516635 adcR SPD_2000 - adc operon repressor AdcR 1853 29.71 -2 1977043..1977180 + 45 116515569 - SPD_2001 - hypothetical protein 1854 40.50 0 1977213..1978481 - 422 116515941 dltD SPD_2002 - undecaprenol-phosphate-poly(glycerophosphate subunit) D-alanine transfer protein 1855 37.50 0 1978474..1978713 - 79 116516809 dltC SPD_2003 - D-alanine--poly(phosphoribitol) ligase subunit 2 1856 41.12 0 1978727..1979971 - 414 116515437 dltB SPD_2004 - protein DltB 1857 44.10 0 1979968..1981518 - 516 116516471 dltA SPD_2005 - D-alanine--D-alanyl carrier protein ligase 1858 35.61 0 1981539..1981670 - 43 116516054 - SPD_2006 - hypothetical protein 1859 33.67 -1 1981984..1983162 - 392 116517160 - SPD_2007 - transporter, major facilitator family protein 1860 37.24 0 1986006..1986593 + 195 116516488 - SPD_2009 - hypothetical protein 1861 44.22 0 1986680..1986826 - 48 116515697 - SPD_2010 - hypothetical protein 1862 46.10 +1 1987074..1987778 - 234 116516308 glpF SPD_2011 - glycerol uptake facilitator protein 1863 44.55 0 1987848..1989674 - 608 116516239 glpO SPD_2012 - alpha-glycerophosphate oxidase 1864 44.14 0 1989716..1991224 - 502 116516212 glpK SPD_2013 - glycerol kinase 1865 40.97 0 1991383..1992810 - 475 116516714 - SPD_2014 - hypothetical protein 1866 45.36 +1 1992975..1993847 + 290 116515969 hslO SPD_2015 - Hsp33-like chaperonin 1867 48.90 +1 1993858..1994814 + 318 116516462 - SPD_2016 - TIM-barrel protein, nifR3 family protein, putative 1868 41.26 0 1995044..1997149 - 701 116515359 cbpA SPD_2017 - choline binding protein A 1869 33.52 -1 1997228..1997755 - 175 116516618 - SPD_2018 - hypothetical protein 1870 34.38 -1 1997838..1999169 - 443 116515721 - SPD_2019 - sensor histidine kinase 1871 36.09 0 1999166..1999819 - 217 116516299 - SPD_2020 - DNA-binding response regulator 1872 33.33 -1 2000108..2000242 - 44 116515451 - SPD_2021 - hypothetical protein 1873 45.50 +1 2000461..2002893 - 810 116516069 - SPD_2022 - ATP-dependent Clp protease, ATP-binding subunit 1874 43.14 0 2002895..2003353 - 152 116516436 ctsR SPD_2023 - transcriptional regulator CtsR 1875 45.68 +1 2003472..2004200 - 242 116517002 - SPD_2024 - ABC transporter, ATP-binding protein 1876 39.88 0 2004200..2005207 - 335 116516189 - SPD_2025 - ABC transporter, substrate-binding protein, putative 1877 42.96 0 2005245..2005961 - 238 116515916 - SPD_2026 - ABC transporter, permease protein 1878 42.27 0 2005966..2006256 - 96 116516871 - SPD_2027 - hypothetical protein 1879 38.98 0 2006512..2007858 - 448 116516664 cbpD SPD_2028 - choline binding protein D 1880 34.46 -1 2007947..2008213 - 88 116515580 - SPD_2029 - hypothetical protein 1881 41.46 0 2008215..2009567 - 450 116516432 dnaB SPD_2030 - replicative DNA helicase 1882 36.42 0 2009611..2010063 - 150 116515335 rplI SPD_2031 - 50S ribosomal protein L9 1883 37.89 0 2010060..2012033 - 657 116516911 - SPD_2032 - DHH subfamily 1 protein 1884 34.06 -1 2012169..2012717 - 182 116516918 yfiA SPD_2033 - ribosomal subunit interface protein 1885 36.20 0 2012797..2013459 - 220 116515869 - SPD_2034 - competence protein ComF, putative 1886 40.11 0 2013456..2014754 - 432 116516737 - SPD_2035 - helicase, putative 1887 39.94 0 2014810..2015445 + 211 116515439 - SPD_2036 - hypothetical protein 1888 41.15 0 2015730..2016650 + 306 116516389 cysK SPD_2037 - cysteine synthase A 1889 39.26 0 2016847..2017116 - 89 116515632 - SPD_2038 - hypothetical protein 1890 41.11 0 2018234..2019274 - 346 116516076 tsf SPD_2041 - elongation factor Ts 1891 41.92 0 2019340..2020119 - 259 116517128 rpsB SPD_2042 - 30S ribosomal protein S2 1892 39.61 0 2020343..2021521 - 392 116516590 - SPD_2043 - secreted 45 kDa protein precursor 1893 32.93 -1 2021615..2022109 - 164 116515493 - SPD_2044 - rod shpae-determining protein MreD, putative 1894 35.65 0 2022109..2022927 - 272 116516374 mreC SPD_2045 - rod shape-determining protein MreC 1895 37.99 0 2022986..2023780 - 264 116516262 - SPD_2046 - cobalt ABC transporter, permease protein 1896 40.48 0 2023773..2024612 - 279 116517082 cbiO1 SPD_2047 - cobalt transporter ATP-binding subunit 1897 39.01 0 2024597..2025424 - 275 116515987 cbiO2 SPD_2048 - cobalt transporter ATP-binding subunit 1898 34.80 -1 2025421..2025966 - 181 116516876 pgsA SPD_2049 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1899 35.16 -1 2025977..2026798 - 273 116515748 - SPD_2050 - hypothetical protein 1900 34.50 -1 2026840..2028123 - 427 116516624 - SPD_2051 - peptidase, M16 family protein 1901 34.37 -1 2028120..2029370 - 416 116515448 - SPD_2052 - hypothetical protein 1902 36.31 0 2029529..2029897 + 122 116515378 - SPD_2053 - hypothetical protein 1903 34.34 -1 2029900..2030997 + 365 116516540 recF SPD_2054 - recombination protein F 1904 41.18 0 2031048..2032526 - 492 116515965 guaB SPD_2055 - inositol-5-monophosphate dehydrogenase 1905 38.79 0 2032678..2033703 - 341 116516810 trpS SPD_2056 - tryptophanyl-tRNA synthetase II 1906 38.69 0 2033909..2035531 + 540 116515858 - SPD_2057 - ABC transporter, ATP-binding protein 1907 32.82 -1 2035593..2038145 + 850 116516813 - SPD_2058 - ABC transporter, permease protein, putative 1908 32.78 -1 2039957..2040499 + 180 116516592 - SPD_2060 - transcriptional regulator, TetR family protein 1909 30.68 -2 2040742..2041494 - 250 116515497 comE SPD_2063 - response regulator 1910 32.13 -1 2041491..2042816 - 441 116515505 comD SPD_2064 - putative sensor histidine kinase ComD 1911 30.16 -2 2042837..2042962 - 41 116517067 comC1 SPD_2065 - competence-stimulating peptide type 1 1912 33.33 -1 2043244..2043723 - 159 116515560 - SPD_2067 - SPOUT methyltransferase superfamily protein 1913 36.55 0 2043906..2045087 + 393 116516698 - SPD_2068 - serine protease 1914 35.05 -1 2045145..2045903 + 252 116515747 - SPD_2069 - SpoJ protein 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0