version 1.0
Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1559 42.11 0 1658026..1658754 - 242 116515426 proV SPD_1643 - choline transporter 1560 41.83 0 1658769..1659533 - 254 116516425 - SPD_1644 - hypothetical protein 1561 40.32 0 1659537..1659980 - 147 116516067 - SPD_1645 - transcriptional regulator, MarR family protein 1562 42.42 0 1660662..1660958 - 98 116516799 - SPD_1646 - hypothetical protein 1563 46.01 +1 1660980..1662044 - 354 116516201 pepA SPD_1647 - glutamyl aminopeptidase PepA 1564 40.74 0 1662445..1663146 + 233 116515575 - SPD_1648 - NAD-dependent epimerase/dehydratase family protein 1565 46.04 +1 1663569..1664528 + 319 116515914 - SPD_1649 - iron-compound ABC transporter, permease protein 1566 43.26 0 1664518..1665474 + 318 116517018 - SPD_1650 - iron-compound ABC transporter, permease protein 1567 44.89 +1 1665471..1666223 + 250 116515957 - SPD_1651 - iron-compound ABC transporter, ATP-binding protein 1568 42.65 0 1666319..1667284 + 321 116515347 - SPD_1652 - iron-compound ABC transporter, iron-compound-binding protein 1569 43.62 0 1667509..1667751 - 80 116516197 - SPD_1653 - hypothetical protein 1570 45.64 +1 1667751..1668473 - 240 116515785 rluB SPD_1654 - ribosomal large subunit pseudouridine synthase B 1571 44.74 +1 1668460..1669029 - 189 116516630 scpB SPD_1655 - segregation and condensation protein B 1572 45.40 +1 1669048..1669776 - 242 116516005 scpA SPD_1656 - segregation and condensation protein A 1573 42.65 0 1669776..1670516 - 246 116517040 xerD SPD_1657 - site-specific tyrosine recombinase XerD-like protein 1574 45.45 +1 1670507..1670968 - 153 116515694 - SPD_1658 - CBS domain-containing protein 1575 47.13 +1 1670965..1671486 - 173 116516789 - SPD_1659 - hypothetical protein 1576 42.59 0 1671462..1672433 - 323 116515496 - SPD_1660 - fused deoxyribonucleotide triphosphate pyrophosphatase/unknown domain-containing protein 1577 48.30 +1 1672430..1673224 - 264 116516596 murI SPD_1661 - glutamate racemase 1578 38.55 0 1673431..1673679 - 82 116516372 - SPD_1662 - hypothetical protein 1579 41.51 0 1673821..1675446 - 541 116515529 treC SPD_1663 - alpha,alpha-phosphotrehalase 1580 44.41 0 1675624..1677591 - 655 116517080 - SPD_1664 - PTS system, trehalose-specific IIABC components 1581 41.77 0 1677776..1678486 + 236 116515994 treR SPD_1665 - trehalose operon repressor 1582 40.88 0 1680023..1680949 - 308 116516555 amiF SPD_1667 - oligopeptide ABC transporter, ATP-binding protein AmiF 1583 42.51 0 1680960..1682027 - 355 116515459 amiE SPD_1668 - oligopeptide ABC transporter, ATP-binding protein AmiE 1584 39.91 0 1682036..1682962 - 308 116516298 amiD SPD_1669 - oligopeptide ABC transporter, permease protein AmiD 1585 39.28 0 1682962..1684458 - 498 116517087 amiC SPD_1670 - oligopeptide ABC transporter, permease protein AmiC 1586 38.99 0 1684525..1686504 - 659 116515355 amiA SPD_1671 - oligopeptide ABC transporter, oligopeptide-binding protein AmiA 1587 37.86 0 1687191..1688384 - 397 116516720 - SPD_1672 - hypothetical protein 1588 38.12 0 1688522..1689964 - 480 116515647 gtfA SPD_1673 - sucrose phosphorylase 1589 42.26 0 1690148..1690315 - 55 116516930 - SPD_1674 - hypothetical protein 1590 42.57 0 1690322..1691155 - 277 116516219 rafG SPD_1675 - sugar ABC transporter, permease protein 1591 41.98 0 1691169..1692035 - 288 116517088 rafF SPD_1676 - sugar ABC transporter, permease protein 1592 43.17 0 1692049..1693308 - 419 116516419 rafE SPD_1677 - sugar ABC transporter, sugar-binding protein 1593 37.26 0 1693400..1695562 - 720 116515396 aga SPD_1678 - alpha-galactosidase AgaN 1594 36.70 0 1695670..1696530 + 286 116516533 msmR SPD_1679 - msm operon regulatory protein MsmR 1595 36.11 0 1696527..1697462 + 311 116515717 - SPD_1680 - biotin--protein ligase 1596 37.83 0 1705095..1706450 - 451 116516423 rumA-2 SPD_1704 - 23S rRNA (uracil-5-)-methyltransferase RumA 1597 35.52 0 1706488..1707264 + 258 116516281 recX SPD_1705 - recombination regulator RecX 1598 38.01 0 1707353..1707886 + 177 116516443 - SPD_1706 - hypothetical protein 1599 22.22 -2 1708240..1708446 - 68 116515970 - SPD_1707 - hypothetical protein 1600 37.15 0 1708606..1709835 + 409 116516793 - SPD_1708 - IS1167, transposase 1601 44.42 0 1709934..1711556 - 540 116516636 groEL SPD_1709 - chaperonin GroEL 1602 44.56 0 1711572..1711856 - 94 116516929 groES SPD_1710 - co-chaperonin GroES 1603 42.93 0 1712012..1712407 - 131 116515814 - SPD_1711 - single-strand DNA-binding protein 1604 45.14 +1 1712485..1713246 - 253 116516362 - SPD_1712 - oxidoreductase, short chain dehydrogenase/reductase family protein 1605 44.50 0 1713279..1713905 - 208 116515611 - SPD_1713 - hypothetical protein 1606 41.19 0 1713921..1714238 - 105 116517084 - SPD_1714 - thioredoxin family protein 1607 44.33 0 1714235..1714534 - 99 116516247 - SPD_1715 - hypothetical protein 1608 36.98 0 1714871..1715062 - 63 116515657 - SPD_1716 - hypothetical protein 1609 40.44 0 1715223..1715897 - 224 116516511 - SPD_1717 - hypothetical protein 1610 42.73 0 1715903..1716349 - 148 116515993 - SPD_1718 - hypothetical protein 1611 44.44 0 1716463..1716966 - 167 116516557 - SPD_1719 - PAP2 family protein 1612 41.87 0 1716963..1717325 - 120 116515659 - SPD_1720 - hypothetical protein 1613 43.90 0 1717391..1718422 - 343 116516021 - SPD_1721 - ABC transporter, ATP-binding protein 1614 34.21 -1 1719267..1719380 - 37 116516096 - SPD_1723 - hypothetical protein 1615 42.68 0 1719860..1720576 - 238 116517178 - SPD_1725 - hypothetical protein 1616 42.02 0 1721457..1722872 - 471 116515376 ply SPD_1726 - pneumolysin 1617 38.93 0 1722883..1723293 - 136 116516591 - SPD_1727 - hypothetical protein 1618 40.39 0 1723286..1723894 - 202 116515483 - SPD_1728 - hypothetical protein 1619 41.39 0 1723907..1724365 - 152 116515874 - SPD_1729 - hypothetical protein 1620 37.16 0 1725654..1725914 - 86 116516597 - SPD_1731 - hypothetical protein 1621 34.78 -1 1725973..1726524 - 183 116516601 - SPD_1732 - hypothetical protein 1622 32.83 -1 1726514..1726711 - 65 116516964 - SPD_1733 - hypothetical protein 1623 33.84 -1 1726715..1727509 - 264 116517008 - SPD_1734 - hypothetical protein 1624 33.10 -1 1727917..1728342 - 141 116516198 - SPD_1735 - hypothetical protein 1625 32.78 -1 1728471..1728830 - 119 116516167 - SPD_1736 - hypothetical protein 1626 46.39 +1 1729601..1730557 - 318 116516777 lytA SPD_1737 - autolysin/N-acetylmuramoyl-L-alanine amidase 1627 41.72 0 1730933..1732303 - 456 116517012 dinF SPD_1738 - MATE efflux family protein DinF 1628 41.82 0 1732610..1733776 - 388 116516275 recA SPD_1739 - recombinase A 1629 45.03 +1 1733831..1735087 - 418 116515783 cinA SPD_1740 - competence damage-inducible protein A 1630 38.35 0 1735172..1736188 - 338 116516376 - SPD_1741 - transcriptional regulator, putative 1631 41.43 0 1736196..1736714 - 172 116516759 - SPD_1742 - acetyltransferase, GNAT family protein 1632 39.86 0 1736704..1737147 - 147 116515913 - SPD_1743 - hypothetical protein 1633 35.27 -1 1737233..1737853 - 206 116516234 - SPD_1744 - hypothetical protein 1634 33.10 -1 1738236..1739099 - 287 116517204 - SPD_1745 - transcriptional regulator PlcR, putative 1635 32.75 -1 1739291..1739461 + 56 116516150 - SPD_1746 - hypothetical protein 1636 38.22 0 1739564..1739788 + 74 116516307 - SPD_1747 - hypothetical protein 1637 34.39 -1 1739795..1739983 + 62 116515563 - SPD_1748 - hypothetical protein 1638 29.09 -2 1740099..1743089 + 996 116516640 - SPD_1749 - bacteriocin formation protein, putative 1639 31.06 -1 1743439..1744143 + 234 116516852 wrbA SPD_1750 - hypothetical protein 1640 27.10 -2 1744124..1745053 + 309 116516025 - SPD_1751 - hypothetical protein 1641 28.31 -2 1745050..1747158 + 702 116516806 - SPD_1752 - toxin secretion ABC transporter, ATP-binding/permease protein 1642 29.48 -2 1747182..1748921 + 579 116515961 - SPD_1753 - serine protease, subtilase family protein 1643 39.58 0 1748972..1749739 + 255 116517021 - SPD_1754 - hypothetical protein 1644 40.60 0 1749741..1750373 + 210 116516211 - SPD_1755 - ABC transporter, ATP-binding protein 1645 28.40 -2 1750531..1750692 + 53 116516632 - SPD_1756 - hypothetical protein 1646 42.03 0 1751319..1751732 - 137 116516942 ndk SPD_1757 - nucleoside diphosphate kinase 1647 46.17 +1 1751843..1755520 - 1225 116515724 rpoC SPD_1758 - DNA-directed RNA polymerase subunit beta' 1648 44.60 0 1755553..1759164 - 1203 116516435 rpoB SPD_1759 - DNA-directed RNA polymerase subunit beta 1649 40.17 0 1759848..1761179 - 443 116515537 - SPD_1761 - CBS domain-containing protein 1650 43.64 0 1761408..1762232 - 274 116516431 - SPD_1762 - DNA-entry nuclease 1651 38.65 0 1762271..1762477 - 68 116516278 - SPD_1763 - hypothetical protein 1652 46.81 +1 1762452..1763735 - 427 116516843 murA-2 SPD_1764 - UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1653 41.71 0 1764047..1765084 - 345 116516010 - SPD_1765 - hypothetical protein 1654 39.47 0 1765068..1765556 - 162 116515643 coaD SPD_1766 - phosphopantetheine adenylyltransferase 1655 45.00 +1 1765546..1766085 - 179 116516705 - SPD_1767 - type II DNA modification methyltransferase, putative 1656 43.40 0 1766150..1767142 - 330 116515784 asnA SPD_1768 - asparagine synthetase AsnA 1657 28.93 -2 1767122..1767280 + 52 116515931 - SPD_1770 - hypothetical protein 1658 42.80 0 1767254..1767961 - 235 116516865 - SPD_1769 - hypothetical protein 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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