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Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1 36.34 0 1..1362 + 453 116516053 dnaA SPD_0001 - chromosomal replication initiation protein 2 34.48 -1 1521..2657 + 378 116516939 dnaN SPD_0002 - DNA polymerase III subunit beta 3 34.87 -1 2722..2916 + 64 116515850 - SPD_0003 - hypothetical protein 4 39.96 0 3000..4115 + 371 116516338 - SPD_0004 - translation-associated GTPase 5 33.33 -1 4186..4755 + 189 116515731 pth SPD_0005 - peptidyl-tRNA hydrolase 6 35.01 -1 4756..8265 + 1169 116516151 mfd SPD_0006 - transcription-repair coupling factor 7 34.83 -1 8323..8589 + 88 116515542 - SPD_0007 - S4 domain-containing protein 8 34.69 -1 8582..8950 + 122 116515979 - SPD_0008 - hypothetical protein 9 30.89 -1 8955..9077 + 40 116516840 - SPD_0009 - hypothetical protein 10 32.78 -1 9070..10338 + 422 116515953 - SPD_0010 - hypothetical protein 11 33.72 -1 10335..11612 + 425 116516781 tilS SPD_0011 - tRNA(Ile)-lysidine synthetase 12 33.33 -1 11616..12158 + 180 116516681 hpt SPD_0012 - hypoxanthine-guanine phosphoribosyltransferase 13 39.20 0 12174..14132 + 652 116515587 ftsH SPD_0013 - cell division protein FtsH 14 37.29 0 14254..14733 + 159 116515336 comX1 SPD_0014 - transcriptional regulator ComX1 15 29.54 -2 22168..22404 + 78 116515956 - SPD_0023 - hypothetical protein 16 40.71 0 22635..23921 + 428 116515772 purA SPD_0024 - adenylosuccinate synthetase 17 43.80 0 24122..24589 + 155 116516620 - SPD_0025 - cytidine/deoxycytidylate deaminase family protein 18 44.59 0 24776..25219 + 147 116515930 dut SPD_0027 - deoxyuridine 5'-triphosphate nucleotidohydrolase 19 41.94 0 25179..25736 + 185 116516859 - SPD_0028 - hypothetical protein 20 47.66 +1 25849..27111 + 420 116516243 radA SPD_0029 - DNA repair protein RadA 21 43.78 0 27184..27681 + 165 116515462 - SPD_0030 - hypothetical protein 22 37.27 0 27706..28365 + 219 116516295 - SPD_0031 - hypothetical protein 23 39.39 0 28358..28489 + 43 116515789 - SPD_0032 - hypothetical protein 24 41.90 0 28634..29602 + 322 116516609 prsA SPD_0033 - ribose-phosphate pyrophosphokinase 25 44.02 0 30143..30376 - 77 116516818 - SPD_0035 - hypothetical protein 26 49.57 +2 30369..30485 - 38 116516187 - SPD_0036 - hypothetical protein 27 39.83 0 30700..31053 - 117 116517001 - SPD_0037 - hypothetical protein 28 43.93 0 31306..33939 + 877 116516654 - SPD_0038 - DNA polymerase I 29 44.29 0 34024..34461 + 145 116515315 - SPD_0039 - hypothetical protein 30 46.39 +1 34652..35662 - 336 116516491 - SPD_0040 - hypothetical protein 31 45.98 +1 35811..36980 + 389 116516139 araT SPD_0041 - aromatic amino acid aminotransferase 32 41.63 0 36977..37747 + 256 116517190 recO SPD_0042 - DNA repair protein RecO 33 47.83 +1 37744..38736 + 330 116515915 plsX SPD_0043 - putative glycerol-3-phosphate acyltransferase PlsX 34 38.89 0 38742..38975 + 77 116515605 - SPD_0044 - acyl carrier protein, putative 35 46.75 +1 39514..39744 + 76 116516897 blpU SPD_0046 - bacteriocin BlpU 36 22.22 -2 39747..39872 + 41 116515804 - SPD_0047 - hypothetical protein 37 44.66 +1 41902..44055 + 717 116516510 comA SPD_0049 - competence factor transporting ATP-binding/permease protein ComA 38 44.52 0 44068..45417 + 449 116515701 comB SPD_0050 - competence factor transport protein ComB 39 40.25 0 45587..46294 + 235 116516190 purC SPD_0051 - phosphoribosylaminoimidazole-succinocarboxamide synthase 40 45.49 +1 46496..50221 + 1241 116516503 - SPD_0052 - phosphoribosylformylglycinamidine synthase, putative 41 46.71 +1 50314..51756 + 480 116515944 purF SPD_0053 - amidophosphoribosyltransferase 42 47.02 +1 51793..52815 + 340 116515735 purM SPD_0054 - phosphoribosylaminoimidazole synthetase 43 47.07 +1 52812..53357 + 181 116515802 purN SPD_0055 - phosphoribosylglycinamide formyltransferase 44 29.41 -2 53441..53950 + 169 116516890 - SPD_0056 - vanZ protein, putative 45 48.00 +1 53975..55522 + 515 116516062 purH SPD_0057 - bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 46 47.51 +1 55644..56906 + 420 116517132 purD SPD_0058 - phosphoribosylamine--glycine ligase 47 50.31 +2 57309..57797 + 162 116515776 purE SPD_0059 - phosphoribosylaminoimidazole carboxylase catalytic subunit 48 47.71 +1 57784..58875 + 363 116516392 purK SPD_0060 - phosphoribosylaminoimidazole carboxylase ATPase subunit 49 35.96 0 58885..59112 + 75 116516948 - SPD_0061 - hypothetical protein 50 46.34 +1 59175..60473 + 432 116516623 purB SPD_0062 - adenylosuccinate lyase 51 42.12 0 60528..64466 - 1312 116517042 strH SPD_0063 - beta-N-acetylhexosaminidase 52 37.50 0 64781..65524 - 247 116515951 - SPD_0064 - transcriptional regulator, GntR family protein 53 41.89 0 65845..67632 + 595 116517213 bgaC SPD_0065 - Beta-galactosidase 3 54 41.09 0 67629..68105 + 158 116516149 - SPD_0066 - PTS system, IIB component 55 44.37 0 68133..69038 + 301 116515606 - SPD_0067 - PTS system, IIC component 56 40.20 0 69025..69840 + 271 116515325 - SPD_0068 - PTS system, IID component 57 43.95 0 69847..70251 + 134 116516395 - SPD_0069 - PTS system, IIA component 58 42.25 0 70550..71716 + 388 116515512 agaS SPD_0070 - sugar isomerase domain-containing protein 59 45.47 +1 71832..72869 + 345 116517175 galM SPD_0071 - aldose 1-epimerase 60 44.33 0 73076..73930 + 284 116517115 - SPD_0072 - hypothetical protein 61 39.53 0 74080..74337 + 85 116515835 - SPD_0073 - hypothetical protein 62 48.63 +1 75312..76076 + 254 116516564 - SPD_0074 - phosphorylase, Pnp/Udp family protein, putative 63 39.25 0 76332..76517 + 61 116516250 - SPD_0075 - hypothetical protein 64 41.45 0 76686..78065 + 459 116516800 - SPD_0076 - potassium uptake protein, Trk family protein 65 43.69 0 78079..78744 + 221 116515848 - SPD_0077 - potassium uptake protein, Trk family protein 66 44.63 +1 79054..79593 + 179 116517146 - SPD_0078 - glycosyl transferase, group 2 family protein 67 42.34 0 79660..80070 + 136 116516097 - SPD_0079 - hypothetical protein 68 42.94 0 80186..83671 + 1161 116515436 - SPD_0080 - cell wall surface anchor family protein 69 41.77 0 83838..84536 + 232 116516719 - SPD_0081 - DNA-binding response regulator 70 43.97 0 84533..85585 + 350 116515418 - SPD_0082 - sensor histidine kinase 71 43.63 0 85780..86391 + 203 116516581 rpsD SPD_0083 - 30S ribosomal protein S4 72 35.85 0 86577..86735 + 52 116515746 - SPD_0084 - IS630-Spn1, transposase Orf1 73 29.79 -2 86833..86973 - 46 116516364 - SPD_0085 - hypothetical protein 74 42.53 0 87053..87313 + 86 116516484 - SPD_0086 - hypothetical protein 75 35.14 -1 87267..87488 + 73 116516464 - SPD_0087 - hypothetical protein 76 41.29 0 87807..88736 + 309 116515415 - SPD_0088 - ABC transporter, permease protein 77 42.21 0 88750..89673 + 307 116516742 - SPD_0089 - ABC transporter, permease protein 78 38.48 0 89931..91406 + 491 116516928 - SPD_0090 - ABC transporter, substrate-binding protein 79 44.48 0 91678..92664 + 328 116517133 - SPD_0091 - hypothetical protein 80 41.11 0 92786..93646 + 286 116516138 - SPD_0092 - hypothetical protein 81 40.00 0 93718..94782 - 354 116516874 - SPD_0093 - hypothetical protein 82 40.90 0 94845..95756 - 303 116515571 - SPD_0094 - hypothetical protein 83 43.94 0 95749..96342 - 197 116516361 - SPD_0095 - hypothetical protein 84 42.20 0 96329..96655 - 108 116515726 - SPD_0096 - hypothetical protein 85 44.82 +1 96794..97960 - 388 116515559 - SPD_0097 - transporter, putative 86 33.33 -1 98018..99175 + 385 116516685 - SPD_0098 - glycosyl transferase, group 2 family protein 87 42.19 0 99217..101067 + 616 116517199 capD SPD_0099 - capsular polysaccharide biosynthesis protein 88 43.13 0 101463..102095 - 210 116515790 - SPD_0101 - hydrolase, haloacid dehalogenase-like family protein 89 48.00 +1 102117..102989 - 290 116516525 sdhA SPD_0102 - L-serine dehydratase, iron-sulfur-dependent, alpha subunit 90 41.67 0 102998..103669 - 223 116516124 sdhB SPD_0103 - L-serine dehydratase, iron-sulfur-dependent, beta subunit 91 40.87 0 103911..104414 + 167 116516732 - SPD_0104 - LysM domain-containing protein 92 38.55 0 104537..104785 - 82 116515849 - SPD_0105 - hypothetical protein 93 39.36 0 105242..105490 + 82 116517179 - SPD_0106 - bacteriocin, putative 94 37.89 0 105545..107653 + 702 116516371 - SPD_0107 - membrnae protein, putative 95 40.81 0 107650..108291 + 213 116516985 - SPD_0108 - amino acid ABC transporter, ATP-binding protein, putative 96 39.53 0 108497..109303 + 268 116516177 - SPD_0109 - amino acid ABC transporter, periplasmic amino acid-binding protein, putative 97 41.77 0 109320..110516 + 398 116515666 argG SPD_0110 - argininosuccinate synthase 98 40.95 0 110545..111936 + 463 116516947 argH SPD_0111 - argininosuccinate lyase 99 37.73 0 112225..113088 - 287 116515314 - SPD_0112 - hypothetical protein 100 29.91 -2 115766..116233 + 155 116516334 - SPD_0114 - hypothetical protein 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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