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Streptococcus pneumoniae D39, complete genome - 1..2046115 1914 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 56 40.20 0 69025..69840 + 271 116515325 - SPD_0068 - PTS system, IID component 57 43.95 0 69847..70251 + 134 116516395 - SPD_0069 - PTS system, IIA component 58 42.25 0 70550..71716 + 388 116515512 agaS SPD_0070 - sugar isomerase domain-containing protein 59 45.47 +1 71832..72869 + 345 116517175 galM SPD_0071 - aldose 1-epimerase 60 44.33 0 73076..73930 + 284 116517115 - SPD_0072 - hypothetical protein 61 39.53 0 74080..74337 + 85 116515835 - SPD_0073 - hypothetical protein 62 48.63 +1 75312..76076 + 254 116516564 - SPD_0074 - phosphorylase, Pnp/Udp family protein, putative 63 39.25 0 76332..76517 + 61 116516250 - SPD_0075 - hypothetical protein 64 41.45 0 76686..78065 + 459 116516800 - SPD_0076 - potassium uptake protein, Trk family protein 65 43.69 0 78079..78744 + 221 116515848 - SPD_0077 - potassium uptake protein, Trk family protein 66 44.63 +1 79054..79593 + 179 116517146 - SPD_0078 - glycosyl transferase, group 2 family protein 67 42.34 0 79660..80070 + 136 116516097 - SPD_0079 - hypothetical protein 68 42.94 0 80186..83671 + 1161 116515436 - SPD_0080 - cell wall surface anchor family protein 69 41.77 0 83838..84536 + 232 116516719 - SPD_0081 - DNA-binding response regulator 70 43.97 0 84533..85585 + 350 116515418 - SPD_0082 - sensor histidine kinase 71 43.63 0 85780..86391 + 203 116516581 rpsD SPD_0083 - 30S ribosomal protein S4 72 35.85 0 86577..86735 + 52 116515746 - SPD_0084 - IS630-Spn1, transposase Orf1 73 29.79 -2 86833..86973 - 46 116516364 - SPD_0085 - hypothetical protein 74 42.53 0 87053..87313 + 86 116516484 - SPD_0086 - hypothetical protein 75 35.14 -1 87267..87488 + 73 116516464 - SPD_0087 - hypothetical protein 76 41.29 0 87807..88736 + 309 116515415 - SPD_0088 - ABC transporter, permease protein 77 42.21 0 88750..89673 + 307 116516742 - SPD_0089 - ABC transporter, permease protein 78 38.48 0 89931..91406 + 491 116516928 - SPD_0090 - ABC transporter, substrate-binding protein 79 44.48 0 91678..92664 + 328 116517133 - SPD_0091 - hypothetical protein 80 41.11 0 92786..93646 + 286 116516138 - SPD_0092 - hypothetical protein 81 40.00 0 93718..94782 - 354 116516874 - SPD_0093 - hypothetical protein 82 40.90 0 94845..95756 - 303 116515571 - SPD_0094 - hypothetical protein 83 43.94 0 95749..96342 - 197 116516361 - SPD_0095 - hypothetical protein 84 42.20 0 96329..96655 - 108 116515726 - SPD_0096 - hypothetical protein 85 44.82 +1 96794..97960 - 388 116515559 - SPD_0097 - transporter, putative 86 33.33 -1 98018..99175 + 385 116516685 - SPD_0098 - glycosyl transferase, group 2 family protein 87 42.19 0 99217..101067 + 616 116517199 capD SPD_0099 - capsular polysaccharide biosynthesis protein 88 43.13 0 101463..102095 - 210 116515790 - SPD_0101 - hydrolase, haloacid dehalogenase-like family protein 89 48.00 +1 102117..102989 - 290 116516525 sdhA SPD_0102 - L-serine dehydratase, iron-sulfur-dependent, alpha subunit 90 41.67 0 102998..103669 - 223 116516124 sdhB SPD_0103 - L-serine dehydratase, iron-sulfur-dependent, beta subunit 91 40.87 0 103911..104414 + 167 116516732 - SPD_0104 - LysM domain-containing protein 92 38.55 0 104537..104785 - 82 116515849 - SPD_0105 - hypothetical protein 93 39.36 0 105242..105490 + 82 116517179 - SPD_0106 - bacteriocin, putative 94 37.89 0 105545..107653 + 702 116516371 - SPD_0107 - membrnae protein, putative 95 40.81 0 107650..108291 + 213 116516985 - SPD_0108 - amino acid ABC transporter, ATP-binding protein, putative 96 39.53 0 108497..109303 + 268 116516177 - SPD_0109 - amino acid ABC transporter, periplasmic amino acid-binding protein, putative 97 41.77 0 109320..110516 + 398 116515666 argG SPD_0110 - argininosuccinate synthase 98 40.95 0 110545..111936 + 463 116516947 argH SPD_0111 - argininosuccinate lyase 99 37.73 0 112225..113088 - 287 116515314 - SPD_0112 - hypothetical protein 100 29.91 -2 115766..116233 + 155 116516334 - SPD_0114 - hypothetical protein 101 34.37 -1 116230..117582 + 450 116516521 - SPD_0115 - hypothetical protein 102 39.63 0 117728..118108 + 126 116515891 - SPD_0116 - hypothetical protein 103 40.86 0 119688..120059 + 123 116516318 - SPD_0117 - hypothetical protein 104 37.30 0 120653..120778 + 41 116515720 - SPD_0118 - hypothetical protein 105 29.93 -2 121084..122142 + 352 116515480 - SPD_0119 - hypothetical protein 106 28.53 -2 122456..123433 + 325 116515901 - SPD_0120 - hypothetical protein 107 40.27 0 123810..124184 + 124 116516556 - SPD_0121 - hypothetical protein 108 29.90 -2 124392..125294 + 300 116515445 - SPD_0122 - hypothetical protein 109 39.27 0 125350..125703 + 117 116516169 - SPD_0123 - hypothetical protein 110 27.01 -2 125670..126428 + 252 116516163 - SPD_0124 - hypothetical protein 111 28.05 -2 127557..127802 + 81 116516979 - SPD_0125 - hypothetical protein 112 42.63 0 128356..130215 + 619 116515876 pspA SPD_0126 - pneumococcal surface protein A 113 48.13 +1 130616..131737 + 373 116516757 trmU SPD_0127 - tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 114 44.30 0 131878..132333 + 151 116516444 - SPD_0128 - MutT/nudix family protein 115 46.34 +1 132343..134256 + 637 116515312 gidA SPD_0129 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 116 46.49 +1 134636..136315 - 559 116516160 - SPD_0130 - metallo-beta-lactamase domain-containing protein 117 43.16 0 136317..136550 - 77 116515572 - SPD_0131 - hypothetical protein 118 35.29 -1 137368..137520 - 50 116516595 - SPD_0132 - hypothetical protein 119 38.17 0 137522..137707 - 61 116516791 - SPD_0133 - hypothetical protein 120 45.47 +1 137885..138568 + 227 116516776 - SPD_0134 - hypothetical protein 121 45.89 +1 138565..139002 + 145 116516175 rimI SPD_0135 - ribosomal-protein-alanine acetyltransferase 122 48.27 +1 138992..140002 + 336 116517063 - SPD_0136 - O-sialoglycoprotein endopeptidase 123 29.52 -2 142604..143809 + 401 116516328 - SPD_0138 - glycosyl transferase, group 1 family protein 124 27.36 -2 143802..144755 + 317 116516905 - SPD_0139 - glycosyl transferase, group 2 family protein 125 30.30 -2 144765..146381 + 538 116516697 - SPD_0140 - ABC transporter, ATP-binding protein 126 24.15 -2 146691..147158 + 155 116515417 - SPD_0141 - hypothetical protein 127 30.95 -1 147164..147919 + 251 116516472 - SPD_0142 - hypothetical protein 128 29.16 -2 147932..149104 + 390 116515340 - SPD_0143 - UDP-glucose 6-dehydrogenase, putative 129 39.35 0 149499..150362 + 287 116516617 - SPD_0144 - transcriptional regulator 130 44.02 0 150653..150886 + 77 116516089 - SPD_0145 - hypothetical protein 131 35.99 0 150908..151585 + 225 116516352 - SPD_0146 - CAAX amino terminal protease family protein 132 37.39 0 151597..152262 + 221 116515826 - SPD_0147 - CAAX amino terminal protease family protein 133 37.41 0 152334..153560 + 408 116517061 - SPD_0148 - transporter, major facilitator family protein 134 45.15 +1 153893..154366 + 157 116516566 - SPD_0149 - hypothetical protein 135 40.79 0 154470..155300 + 276 116517098 - SPD_0150 - ABC transporter, substrate-binding protein 136 40.47 0 155454..156308 + 284 116516447 - SPD_0151 - lipoprotein 137 46.22 +1 156408..157781 + 457 116515387 - SPD_0152 - hypothetical protein 138 43.69 0 157774..158835 + 353 116515828 - SPD_0153 - ABC transporter, ATP-binding protein 139 45.31 +1 158837..159529 + 230 116517111 - SPD_0154 - ABC transporter, permease protein, putative 140 44.21 0 159559..160128 - 189 116516723 - SPD_0155 - hypothetical protein 141 39.02 0 160263..160877 + 204 116515665 - SPD_0156 - hypothetical protein 142 40.86 0 160879..162525 + 548 116515317 - SPD_0157 - sensor histidine kinase, putative 143 40.79 0 162537..163823 + 428 116516660 - SPD_0158 - DNA-binding response regulator 144 39.14 0 163875..164408 + 177 116516260 - SPD_0159 - hypothetical protein 145 40.55 0 164486..164956 + 156 116516077 - SPD_0160 - hypothetical protein 146 44.66 +1 165249..166511 - 420 116516889 - SPD_0161 - hypothetical protein 147 46.19 +1 166821..167279 - 152 116515862 - SPD_0162 - hypothetical protein 148 40.82 0 167276..167716 - 146 116516702 - SPD_0163 - hypothetical protein 149 40.56 0 167832..168011 + 59 116515582 - SPD_0164 - hypothetical protein 150 46.00 +1 168072..170021 + 649 116516396 mutL SPD_0165 - DNA mismatch repair protein 151 35.68 0 170346..170813 - 155 116517138 ribH SPD_0166 - 6,7-dimethyl-8-ribityllumazine synthase 152 35.24 -1 170814..172019 - 401 116516104 ribB SPD_0167 - 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 153 33.49 -1 172039..172674 - 211 116516797 ribE SPD_0168 - riboflavin synthase subunit alpha 154 36.33 0 172659..173759 - 366 116515773 ribD SPD_0169 - riboflavin biosynthesis protein RibD 155 43.43 0 174163..174756 + 197 116515482 ruvA SPD_0170 - Holliday junction DNA helicase motor protein 40.03 MEAN 4.59 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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