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Streptococcus pneumoniae R6, complete genome - 1..2038615 2043 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1944 37.69 0 1928807..1929196 + 129 15903988 IS1381 spr1947 - tranposase (orf2) 1945 37.92 0 1929248..1929574 - 108 15903989 - spr1948 - hypothetical protein 1946 46.15 +1 1929900..1931780 - 626 15903990 - spr1949 - glycosyl hydrolase-related protein 1947 46.71 +1 1931774..1932655 - 293 15903991 - spr1950 - ROK family protein 1948 44.83 +1 1932727..1935387 - 886 15903992 - spr1951 - hypothetical protein 1949 46.05 +1 1935463..1936767 - 434 15903993 - spr1952 - hypothetical protein 1950 46.81 +1 1936914..1938998 + 694 15903994 - spr1953 - hypothetical protein 1951 46.46 +1 1939038..1940789 - 583 15903995 - spr1954 - hypothetical protein 1952 42.20 0 1941478..1942221 + 247 15903996 arcA-truncation spr1955 - arginine deiminase, truncation 1953 43.11 0 1942262..1942711 + 149 15903997 arcA-truncation spr1956 - arginine deiminase, truncation 1954 42.28 0 1942769..1943785 + 338 15903998 arcB spr1957 - ornithine carbamoyltransferase 1955 41.67 0 1943950..1944897 + 315 15903999 arcC spr1958 - carbamate kinase 1956 42.72 0 1945106..1946617 + 503 15904000 - spr1959 - hypothetical protein 1957 44.82 +1 1946639..1947970 + 443 15904001 - spr1960 - hypothetical protein 1958 30.93 -1 1948375..1948665 - 96 15904002 - spr1961 - hypothetical protein 1959 42.44 0 1949304..1950203 - 299 15904003 - spr1962 - hypothetical protein 1960 41.23 0 1950333..1951484 - 383 15904004 adh2 spr1963 - iron-containing alcohol dehydrogenase 1961 42.22 0 1951630..1953396 - 588 15904005 fucI spr1964 - L-fucose isomerase 1962 34.10 -1 1953453..1956569 - 1038 15904006 - spr1965 - fucolectin-related protein 1963 33.42 -1 1956579..1958873 - 764 15904007 - spr1966 - hypothetical protein 1964 34.71 -1 1958932..1959732 - 266 15904008 PTS-EII spr1967 - PTS system, IID component 1965 37.34 0 1959729..1960502 - 257 15904009 PTS-EII spr1968 - PTS system, IIC component 1966 32.06 -1 1960527..1960997 - 156 15904010 PTS-EII spr1969 - PTS system, IIB component 1967 32.89 -1 1960988..1961434 - 148 15904011 PTS-EII spr1970 - PTS system, IIA component 1968 32.65 -1 1961412..1961852 - 146 15904012 fucU spr1971 - fucose pathway protein, function unknown 1969 37.16 0 1961864..1962517 - 217 15904013 fucA spr1972 - L-fuculose phosphate aldolase 1970 35.68 0 1962617..1964065 - 482 15904014 fcsK spr1973 - fucose kinase 1971 33.98 -1 1964196..1964969 + 257 15904015 fcsR spr1974 - fucose operon repressor, putative 1972 42.63 0 1966098..1967603 - 501 15904016 adcA spr1975 - zinc ABC transporter zinc-binding protein 1973 43.61 0 1967613..1968449 - 278 15904017 adcB spr1976 - zinc ABC transporter permease 1974 45.11 +1 1968412..1969116 - 234 15904018 adcC spr1977 - ABC transporter ATPase 1975 40.72 0 1969116..1969616 - 166 15904019 adcR spr1978 - adc operon repressor AdcR 1976 40.50 0 1969711..1970994 - 427 15904020 dltD spr1979 - D-alanine transfer from undecaprenol-phosphate to the poly(glycerophosphate) chain 1977 37.50 0 1970972..1971211 - 79 15904021 dltC spr1980 - D-alanine--poly(phosphoribitol) ligase subunit 2 1978 41.12 0 1971225..1972469 - 414 15904022 dltB spr1981 - D-alanine transfer from Dcp to undecaprenol-phosphate 1979 44.51 +1 1972466..1973932 - 488 15904023 dltA spr1982 - D-alanine--D-alanyl carrier protein ligase 1980 33.67 -1 1974482..1975660 - 392 15904024 - spr1983 - hypothetical protein 1981 39.48 0 1976116..1977108 - 330 15904025 transposase_H spr1984 - hypothetical protein 1982 37.94 0 1977112..1977393 - 93 15904026 transposase_H spr1985 - hypothetical protein 1983 37.24 0 1978504..1979091 + 195 15904027 - spr1986 - hypothetical protein 1984 42.65 0 1979178..1979381 - 67 15904028 - spr1987 - hypothetical protein 1985 46.10 +1 1979572..1980276 - 234 15904029 glpF spr1988 - glycerol uptake facilitator protein 1986 44.18 0 1980346..1980843 - 165 15904030 glpD-truncation spr1989 - glycerol-3-phosphate dehydrogenase, truncation 1987 44.81 +1 1980789..1982174 - 461 15904031 glpD-truncation spr1990 - glycerol-3-phosphate dehydrogenase, truncation 1988 44.14 0 1982216..1983724 - 502 15904032 glpK spr1991 - glycerol kinase 1989 40.97 0 1983883..1985310 - 475 15904033 - spr1992 - hypothetical protein 1990 45.36 +1 1985475..1986347 + 290 15904034 hslO spr1993 - Hsp33-like chaperonin 1991 48.27 +1 1986304..1987314 + 336 15904035 - spr1994 - hypothetical protein 1992 41.26 0 1987544..1989649 - 701 15904036 pspC spr1995 - choline binding protein A 1993 33.52 -1 1989728..1990255 - 175 15904037 - spr1996 - hypothetical protein 1994 34.38 -1 1990338..1991669 - 443 15904038 hk06 spr1997 - histidine kinase 1995 36.09 0 1991666..1992319 - 217 15904039 rr06 spr1998 - response regulator 1996 45.14 +1 1992961..1993104 - 47 15904040 clpC-truncation spr1999 - class III stress response-related ATPase, truncation 1997 45.48 +1 1993105..1995393 - 762 15904041 clpC-truncation spr2000 - ATP-dependent Clp protease, ATP-binding subunit 1998 42.15 0 1995395..1995916 - 173 15904042 ctsR spr2001 - transcriptional regulator CtsR 1999 45.68 +1 1995972..1996700 - 242 15904043 ABC-NBD spr2002 - ABC transporter ATP-binding protein 2000 39.88 0 1996700..1997707 - 335 15904044 - spr2003 - ABC transporter substrate-binding protein 2001 42.39 0 1997745..1998506 - 253 15904045 ABC-MSP spr2004 - ABC transporter permease 2002 42.27 0 1998466..1998756 - 96 15904046 - spr2005 - hypothetical protein 2003 38.90 0 1999012..2000358 - 448 15904047 cbpD spr2006 - choline binding protein D 2004 34.46 -1 2000447..2000713 - 88 15904048 - spr2007 - hypothetical protein 2005 41.46 0 2000715..2002067 - 450 15904049 dnaC spr2008 - replicative DNA helicase 2006 36.42 0 2002111..2002563 - 150 15904050 rplI spr2009 - 50S ribosomal protein L9 2007 37.89 0 2002560..2004533 - 657 15904051 - spr2010 - DHH subfamily 1 protein 2008 34.06 -1 2004669..2005217 - 182 15904052 - spr2011 - ribosomal subunit interface protein 2009 36.20 0 2005297..2005959 - 220 15904053 comFC spr2012 - competence protein ComF, putative 2010 40.11 0 2005956..2007254 - 432 15904054 comFA spr2013 - helicase, putative 2011 39.94 0 2007310..2007945 + 211 15904055 - spr2014 - hypothetical protein 2012 41.15 0 2008230..2009150 + 306 15904056 cycK spr2015 - cysteine synthase, O-acetylserine sulfhydrylase 2013 39.26 0 2009347..2009616 - 89 15904057 transposase_G spr2016 - hypothetical protein 2014 36.67 0 2009766..2009945 + 59 15904058 transposase_D spr2017 - degenerate transposase 2015 40.28 0 2010201..2010488 - 95 15904059 transposase_E spr2018 - degenerate transposase 2016 41.11 0 2010734..2011774 - 346 15904060 tsf spr2019 - elongation factor Ts 2017 41.92 0 2011840..2012619 - 259 15904061 rpsB spr2020 - 30S ribosomal protein S2 2018 39.61 0 2012843..2014021 - 392 15904062 gsp-781 spr2021 - general stress protein GSP-781 2019 32.93 -1 2014115..2014609 - 164 15904063 mreD spr2022 - rod shpae-determining protein MreD, putative 2020 35.65 0 2014609..2015427 - 272 15904064 mreC spr2023 - rod shape-determining protein MreC 2021 37.99 0 2015486..2016280 - 264 15904065 ABC-MSP spr2024 - ABC transporter membrane-spanning permease - unknown substrate 2022 40.48 0 2016273..2017112 - 279 15904066 ABC-NBP spr2025 - cobalt transporter ATP-binding subunit 2023 39.01 0 2017097..2017924 - 275 15904067 stpA spr2026 - cobalt transporter ATP-binding subunit 2024 34.80 -1 2017921..2018466 - 181 15904068 pgsA spr2027 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2025 35.14 -1 2018477..2019307 - 276 15904069 - spr2028 - hypothetical protein 2026 34.50 -1 2019340..2020623 - 427 15904070 - spr2029 - hypothetical protein 2027 34.37 -1 2020620..2021870 - 416 15904071 - spr2030 - hypothetical protein 2028 36.31 0 2022029..2022397 + 122 15904072 - spr2031 - hypothetical protein 2029 34.34 -1 2022400..2023497 + 365 15904073 recF spr2032 - recombination protein F 2030 41.18 0 2023548..2025026 - 492 15904074 imdH spr2033 - inositol-5-monophosphate dehydrogenase 2031 38.79 0 2025178..2026203 - 341 15904075 trpS spr2034 - tryptophanyl-tRNA synthetase II 2032 38.69 0 2026409..2028031 + 540 15904076 ABC-NBD spr2035 - ABC transporter ATP-binding protein 2033 32.82 -1 2028093..2030645 + 850 15904077 - spr2036 - ABC transporter permease 2034 35.87 0 2030746..2031060 - 104 15904078 - spr2037 - hypothetical protein 2035 37.76 0 2031088..2031426 - 112 15904079 - spr2038 - hypothetical protein 2036 35.03 -1 2031511..2032278 - 255 15904080 - spr2039 - hypothetical protein 2037 32.78 -1 2032457..2032999 + 180 15904081 - spr2040 - hypothetical protein 2038 30.68 -2 2033242..2033994 - 250 15904082 comE spr2041 - response regulator 2039 32.13 -1 2033991..2035316 - 441 15904083 comD spr2042 - putative sensor histidine kinase ComD 2040 30.16 -2 2035337..2035462 - 41 15904084 comC spr2043 - competence stimulating peptide precursor (csp) 2041 33.33 -1 2035744..2036223 - 159 15904085 - spr2044 - SPOUT methyltransferase superfamily protein 2042 36.60 0 2036394..2037587 + 397 15904086 sphtra spr2045 - serine protease 2043 35.05 -1 2037645..2038403 + 252 15904087 spo0J spr2046 - chromosome segregation protein 39.86 MEAN 4.53 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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