version 1.0
Staphylothermus marinus F1, complete genome - 1..1570485 1570 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 803 39.67 +1 813611..813973 + 120 126465716 - Smar_0816 - 50S ribosomal protein L18AE 804 38.19 0 813979..814431 + 150 126465717 - Smar_0817 - 50S ribosomal protein L13P 805 42.51 +1 814428..814841 + 137 126465718 rps9p Smar_0818 - 30S ribosomal protein S9P 806 34.83 0 814863..815063 + 66 126465719 - Smar_0819 - DNA-directed RNA polymerase subunit N 807 37.86 0 815086..815748 + 220 126465720 rps2P Smar_0820 - 30S ribosomal protein S2 808 39.89 +1 815757..816626 + 289 126465721 - Smar_0821 - hypothetical protein 809 34.93 0 816716..817840 + 374 126465722 - Smar_0822 - isopentenyl pyrophosphate isomerase 810 32.95 0 817843..818361 + 172 126465723 - Smar_0823 - hypothetical protein 811 35.27 0 818381..820081 + 566 126465724 - Smar_0824 - glutamyl-tRNA synthetase 812 41.09 +1 820158..820544 + 128 126465725 rpl7ae Smar_0825 - 50S ribosomal protein L7Ae 813 37.78 0 820690..820959 - 89 126465726 rps28e Smar_0826 - 30S ribosomal protein S28e 814 35.98 0 821146..821334 + 62 126465727 - Smar_0827 - 50S ribosomal protein L24E 815 37.09 0 821356..821781 + 141 126465728 - Smar_0828 - nucleoside diphosphate kinase 816 37.89 0 821792..823612 - 606 126465729 - Smar_0829 - translation initiation factor IF-2 817 36.71 0 823915..824565 + 216 126465730 - Smar_0830 - 30S ribosomal protein S6e 818 41.87 +1 824649..825902 + 417 126465731 - Smar_0831 - translation initiation factor IF-2 subunit gamma 819 33.09 0 825922..826332 + 136 126465732 - Smar_0832 - SSU processome protein Utp24 820 36.38 0 826446..827003 + 185 126465733 - Smar_0833 - DNA-directed RNA polymerase subunit E' 821 39.61 +1 827009..827215 + 68 126465734 - Smar_0834 - DNA-directed RNA polymerase, subunit E'' 822 32.71 0 827225..827707 + 160 126465735 - Smar_0835 - hypothetical protein 823 36.41 0 827754..828110 + 118 126465736 - Smar_0836 - SSU ribosomal protein S24E 824 38.79 0 828116..828280 + 54 126465737 - Smar_0837 - ribosomal protein S27a 825 38.94 0 828374..829390 + 338 126465738 - Smar_0838 - metalloendopeptidase glycoprotease family 826 32.75 0 829375..830055 + 226 126465739 - Smar_0839 - Mn2+-dependent serine/threonine protein kinase 827 33.16 0 830048..830629 + 193 126465740 - Smar_0840 - RdgB/HAM1 family non-canonical purine NTP pyrophosphatase 828 39.14 0 830697..831161 + 154 126465741 rps15p Smar_0841 - 30S ribosomal protein S15P 829 30.34 -1 831238..832407 + 389 126465742 - Smar_0842 - hypothetical protein 830 29.59 -1 832385..832651 + 88 126465743 - Smar_0843 - hypothetical protein 831 34.74 0 832711..833349 + 212 126465744 - Smar_0844 - 30S ribosomal protein S3Ae 832 33.54 0 833556..834044 + 162 126465745 - Smar_0845 - THUMP domain-containing protein 833 41.67 +1 834041..834208 + 55 126465746 - Smar_0846 - hypothetical protein 834 42.81 +2 834223..835488 + 421 126465747 - Smar_0847 - IS605 family transposase OrfB 835 36.22 0 836037..837317 + 426 126465748 - Smar_0849 - nucleotidyl transferase 836 36.24 0 837363..837740 + 125 126465749 - Smar_0850 - hypothetical protein 837 38.37 0 837709..838938 - 409 126465750 - Smar_0851 - translation-associated GTPase 838 40.72 +1 839081..839743 + 220 126465751 - Smar_0852 - 50S ribosomal protein L15e 839 33.33 0 839749..840192 + 147 126465752 - Smar_0853 - hypothetical protein 840 29.13 -1 840193..840810 + 205 126465753 - Smar_0854 - RNase P subunit p30 841 29.48 -1 840807..841325 + 172 126465754 - Smar_0855 - ribonuclease P protein subunit Rpp14 842 37.48 0 841781..842527 + 248 126465755 - Smar_0856 - proteasome subunit alpha 843 36.06 0 842632..843327 + 231 126465756 - Smar_0857 - putative RNA-associated protein 844 37.62 0 843335..844057 + 240 126465757 - Smar_0858 - exosome complex RNA-binding protein Rrp4 845 39.28 0 844062..844784 + 240 126465758 - Smar_0859 - ribosomal RNA-processing protein RRP41/SKI6 846 36.36 0 844796..845653 + 285 126465759 - Smar_0860 - exosome complex RNA-binding protein Rrp42 847 41.67 +1 845691..845954 + 87 126465760 rpl37ae Smar_0861 - 50S ribosomal protein L37Ae 848 31.86 -1 845975..846517 + 180 126465761 - Smar_0862 - Brix 849 30.62 -1 846510..846767 + 85 126465762 - Smar_0863 - hypothetical protein 850 34.43 0 846764..847129 + 121 126465763 - Smar_0864 - prefoldin, beta subunit 851 34.01 0 847378..848412 + 344 126465764 - Smar_0865 - phosphoesterase domain-containing protein 852 40.43 +1 848511..850721 + 736 126465765 - Smar_0866 - elongation factor EF-2 853 37.89 0 850832..851116 - 94 126465766 - Smar_0867 - hypothetical protein 854 34.36 0 851516..852199 + 227 126465767 - Smar_0868 - hypothetical protein 855 32.38 -1 852425..852634 + 69 126465768 - Smar_0869 - 50S ribosomal protein L38E 856 37.85 0 852642..853925 - 427 126465769 - Smar_0870 - beta-lactamase domain-containing protein 857 37.22 0 854080..854439 + 119 126465770 nac Smar_0871 - nascent polypeptide-associated complex protein 858 33.45 0 854466..857033 + 855 126465771 - Smar_0872 - DNA polymerase I 859 39.24 0 857109..857396 + 95 126465772 - Smar_0873 - 30S ribosomal protein S26e 860 28.79 -2 857596..857859 + 87 126465773 - Smar_0874 - hypothetical protein 861 33.95 0 857910..858233 + 107 126465774 - Smar_0875 - hypothetical protein 862 37.47 0 858317..858799 + 160 126465775 - Smar_0876 - putative RNA methylase 863 34.60 0 858808..859596 - 262 126465776 - Smar_0877 - tRNA (adenine-57, 58-N(1)-) methyltransferase 864 35.67 0 859736..860206 + 156 126465777 - Smar_0878 - hypothetical protein 865 32.77 0 860213..860389 - 58 126465778 - Smar_0879 - CopG/Arc/MetJ family transcriptional regulator 866 32.46 -1 860444..861127 - 227 126465779 - Smar_0880 - tRNA-binding domain-containing protein 867 33.61 0 861170..862621 - 483 126465780 - Smar_0881 - glycosyl transferase family protein 868 30.93 -1 862758..864128 + 456 126465781 - Smar_0882 - hypothetical protein 869 37.41 0 864320..865300 + 326 126465782 - Smar_0883 - hypothetical protein 870 35.39 0 865320..866387 + 355 126465783 - Smar_0884 - L-threonine synthase 871 35.59 0 866748..867812 - 354 126465784 - Smar_0885 - peptidase M50 872 36.39 0 867917..868636 + 239 126465785 - Smar_0886 - DNA polymerase beta subunit 873 34.45 0 868633..869703 - 356 126465786 - Smar_0887 - cell division protein pelota 874 36.49 0 869780..872185 + 801 126465787 - Smar_0888 - DNA polymerase II 875 36.94 0 872194..873468 - 424 126465788 - Smar_0889 - DNA primase 876 36.46 0 873845..874933 - 362 126465789 - Smar_0890 - tyrosyl-tRNA synthetase 877 38.72 0 875355..876041 - 228 126465790 - Smar_0891 - beta-lactamase domain-containing protein 878 37.64 0 876286..877191 + 301 126465791 - Smar_0892 - methionine aminopeptidase 879 37.61 0 877285..878382 + 365 126465792 - Smar_0893 - hypothetical protein 880 31.50 -1 878379..878651 + 90 126465793 - Smar_0894 - hypothetical protein 881 33.00 0 879048..879350 - 100 126465794 - Smar_0895 - hypothetical protein 882 34.08 0 879366..879632 - 88 126465795 - Smar_0896 - hypothetical protein 883 35.92 0 879722..880030 + 102 126465796 - Smar_0897 - hypothetical protein 884 30.65 -1 880068..880328 + 86 126465797 - Smar_0898 - hypothetical protein 885 35.60 0 880343..881752 + 469 126465798 - Smar_0899 - pyruvate kinase 886 30.35 -1 881835..883343 + 502 126465799 - Smar_0900 - hypothetical protein 887 38.32 0 883545..884246 - 233 126465800 - Smar_0901 - triosephosphate isomerase 888 41.86 +1 884310..885482 - 390 126465801 - Smar_0902 - D-fructose 1,6-bisphosphatase 889 37.76 0 885647..887452 - 601 126465802 - Smar_0903 - putative ATPase RIL 890 39.24 0 887627..887914 - 95 126465803 - Smar_0904 - DNA-directed RNA polymerase, subunit M 891 27.85 -2 888202..888693 - 163 126465804 - Smar_0905 - hypothetical protein 892 32.85 0 888758..888964 - 68 126465805 rps17E Smar_0906 - 30S ribosomal protein S17e 893 40.77 +1 889149..890789 + 546 126465806 - Smar_0907 - thermosome subunit 894 34.97 0 892298..892663 - 121 126465807 - Smar_0909 - hypothetical protein 895 36.22 0 892759..893208 + 149 126465808 - Smar_0910 - like-Sm ribonucleoprotein, core 896 34.05 0 893215..894753 + 512 126465809 - Smar_0911 - 7-cyano-7-deazaguanine tRNA-ribosyltransferase 897 37.72 0 894716..895468 - 250 126465810 - Smar_0912 - hypothetical protein 898 36.83 0 895473..895958 - 161 126465811 - Smar_0913 - PUA domain-containing protein 899 36.89 0 896050..897258 - 402 126465812 - Smar_0914 - proteasome-activating nucleotidase 900 38.24 0 897362..897871 + 169 126465813 - Smar_0915 - XRE family transcriptional regulator 901 32.34 -1 897897..899003 + 368 126465814 - Smar_0916 - small GTP-binding protein 902 38.15 0 898957..899517 + 186 126465815 - Smar_0917 - hypothetical protein 35.91 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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