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Staphylothermus marinus F1, complete genome - 1..1570485 1570 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1006 30.96 -1 1000974..1002911 + 645 126465919 - Smar_1022 - hypothetical protein 1007 36.57 0 1002962..1003393 + 143 126465920 rps19p Smar_1023 - 30S ribosomal protein S19P 1008 38.61 0 1003412..1003885 + 157 126465921 rpl22p Smar_1024 - 50S ribosomal protein L22P 1009 38.52 0 1003888..1004562 + 224 126465922 - Smar_1025 - SSU ribosomal protein S3P 1010 35.78 0 1004574..1004777 + 67 126465923 - Smar_1026 - 50S ribosomal protein L29P 1011 35.13 0 1004808..1005086 + 92 126465924 - Smar_1027 - ribonuclease P protein subunit Rpp29 1012 37.57 0 1005097..1005450 + 117 126465925 - Smar_1028 - SSU ribosomal protein S17P 1013 43.97 +2 1005450..1005872 + 140 126465926 rpl14p Smar_1029 - 50S ribosomal protein L14P 1014 37.91 0 1005884..1006342 + 152 126465927 rpl24p Smar_1030 - 50S ribosomal protein L24P 1015 36.23 0 1006342..1007100 + 252 126465928 - Smar_1031 - 30S ribosomal protein S4e 1016 37.39 0 1007100..1007666 + 188 126465929 rpl5p Smar_1032 - 50S ribosomal protein L5P 1017 35.76 0 1007690..1007854 + 54 126465930 rps14P Smar_1033 - 30S ribosomal protein S14P 1018 37.81 0 1007901..1008302 + 133 126465931 rps8p Smar_1034 - 30S ribosomal protein S8P 1019 31.54 -1 1008322..1008879 + 185 126465932 - Smar_1035 - 50S ribosomal protein L6P 1020 36.50 0 1008876..1009286 + 136 126465933 - Smar_1036 - 50S ribosomal protein L32E 1021 39.00 0 1009307..1009765 + 152 126465934 rpl19e Smar_1037 - 50S ribosomal protein L19e 1022 44.50 +2 1009774..1010382 + 202 126465935 rpl18p Smar_1038 - 50S ribosomal protein L18P 1023 41.55 +1 1010385..1011029 + 214 126465936 rps5p Smar_1039 - 30S ribosomal protein S5P 1024 35.79 0 1011049..1011537 + 162 126465937 rpl30p Smar_1040 - 50S ribosomal protein L30P 1025 39.87 +1 1011561..1012019 + 152 126465938 rpl15p Smar_1041 - 50S ribosomal protein L15P 1026 38.43 0 1012145..1013575 + 476 126465939 - Smar_1042 - preprotein translocase subunit SecY 1027 31.99 -1 1013581..1014027 + 148 126465940 - Smar_1043 - hypothetical protein 1028 42.29 +1 1014124..1014402 + 92 126465941 - Smar_1044 - 50S ribosomal protein L34E 1029 32.58 0 1014500..1015033 + 177 126465942 - Smar_1045 - cytidylate kinase 1030 36.43 0 1015091..1015381 + 96 126465943 - Smar_1046 - 50S ribosomal protein L14E 1031 39.30 0 1015523..1015807 + 94 126465944 - Smar_1047 - DKCLD domain-containing protein 1032 39.43 +1 1015826..1016596 + 256 126465945 - Smar_1048 - tRNA pseudouridine synthase B 1033 34.54 0 1016596..1017177 + 193 126465946 - Smar_1049 - methyltransferase small 1034 36.67 0 1017319..1018188 - 289 126465947 - Smar_1050 - phosphoesterase, PA-phosphatase related 1035 40.32 +1 1018390..1019721 - 443 126465948 rbcL Smar_1051 - ribulose bisophosphate carboxylase 1036 32.91 0 1019825..1020295 + 156 126465949 - Smar_1052 - archease family protein 1037 34.40 0 1020284..1020844 - 186 126465950 - Smar_1053 - peptidase, zinc-dependent 1038 38.03 0 1021132..1021833 + 233 126465951 - Smar_1054 - nucleotidyl transferase 1039 39.48 +1 1022279..1023385 + 368 126465952 - Smar_1055 - putative glutamate synthase subunit beta 1040 41.53 +1 1023406..1023942 + 178 126465953 - Smar_1056 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1041 33.94 0 1024016..1025491 + 491 126465954 - Smar_1057 - NADH/ubiquinone/plastoquinone (complex I) 1042 34.76 0 1025491..1027035 + 514 126465955 - Smar_1058 - NADH/ubiquinone/plastoquinone (complex I) 1043 36.60 0 1027032..1027337 + 101 126465956 - Smar_1059 - hypothetical protein 1044 33.33 0 1027321..1028226 + 301 126465957 - Smar_1060 - hydrogenase-4 component C 1045 38.31 0 1028256..1029902 + 548 126465958 - Smar_1061 - NADH dehydrogenase (ubiquinone), 30 kDa subunit 1046 35.23 0 1029910..1030437 + 175 126465959 - Smar_1062 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 1047 39.58 +1 1030427..1030906 + 159 126465960 - Smar_1063 - NADH ubiquinone oxidoreductase, 20 kDa subunit 1048 27.27 -2 1030899..1031162 + 87 126465961 - Smar_1064 - hypothetical protein 1049 32.98 0 1031172..1031456 + 94 126465962 - Smar_1065 - multiple resistance and pH regulation protein F 1050 39.53 +1 1031459..1031845 + 128 126465963 - Smar_1066 - monovalent cation/proton antiporter, MnhG/PhaG subunit 1051 35.27 0 1031842..1032099 + 85 126465964 - Smar_1067 - hypothetical protein 1052 36.98 0 1032103..1032897 + 264 126465965 - Smar_1068 - Na+/H+ antiporter MnhB subunit-related protein 1053 34.88 0 1032909..1033295 + 128 126465966 - Smar_1069 - NADH-ubiquinone oxidoreductase, chain 4L 1054 32.94 0 1033302..1033808 + 168 126465967 - Smar_1070 - cation antiporter 1055 37.02 0 1033830..1035482 + 550 126465968 - Smar_1071 - putative monovalent cation/H+ antiporter subunit D 1056 40.20 +1 1035506..1036510 - 334 126465969 - Smar_1072 - alcohol dehydrogenase 1057 34.28 0 1037039..1037356 + 105 126465970 - Smar_1073 - hypothetical protein 1058 40.04 +1 1037379..1037855 + 158 126465971 - Smar_1074 - hypothetical protein 1059 32.20 -1 1037922..1038626 + 234 126465972 - Smar_1075 - sugar fermentation stimulation protein A 1060 37.33 0 1038814..1040088 - 424 126465973 - Smar_1076 - major facilitator transporter 1061 33.33 0 1040191..1040721 - 176 126465974 dcd Smar_1077 - deoxycytidine triphosphate deaminase 1062 35.37 0 1040711..1041694 - 327 126465975 - Smar_1078 - thymidylate synthase, flavin-dependent 1063 33.33 0 1041687..1042490 - 267 126465976 - Smar_1079 - anaerobic ribonucleoside-triphosphate reductase activating protein 1064 38.75 0 1042552..1044453 - 633 126465977 - Smar_1080 - anaerobic ribonucleoside triphosphate reductase 1065 35.35 0 1044611..1045303 - 230 126465978 - Smar_1081 - ribosome biogenesis protein 1066 33.88 0 1045744..1046112 + 122 126465979 - Smar_1083 - hypothetical protein 1067 40.96 +1 1046097..1046594 + 165 126465980 - Smar_1084 - 30S ribosomal protein S19e 1068 37.61 0 1046612..1046938 + 108 126465981 - Smar_1085 - DNA-binding TFAR19-related protein 1069 37.82 0 1046956..1047111 + 51 126465982 - Smar_1086 - 50S ribosomal protein L39E 1070 34.95 0 1047153..1047461 + 102 126465983 - Smar_1087 - 50S ribosomal protein L31E 1071 35.09 0 1047549..1048232 + 227 126465984 - Smar_1088 - translation initiation factor IF-6 1072 35.61 0 1048235..1048498 + 87 126465985 - Smar_1089 - 50S ribosomal protein LX 1073 33.12 0 1048495..1048974 + 159 126465986 - Smar_1090 - prefoldin, alpha subunit 1074 34.01 0 1049025..1049912 + 295 126465987 - Smar_1091 - signal recognition particle-docking protein FtsY 1075 36.46 0 1050126..1050605 + 159 126465988 - Smar_1092 - 50S ribosomal protein L24A 1076 37.10 0 1050608..1051138 + 176 126465989 rpl11p Smar_1093 - 50S ribosomal protein L11P 1077 40.43 +1 1051146..1051793 + 215 126465990 rpl1P Smar_1094 - 50S ribosomal protein L1P 1078 37.95 0 1051801..1052817 + 338 126465991 rplP0 Smar_1095 - acidic ribosomal protein P0 1079 35.90 0 1053468..1056197 + 909 126465992 alaS Smar_1097 - alanyl-tRNA synthetase 1080 35.77 0 1056534..1057967 + 477 126465993 - Smar_1098 - cation transporter 1081 34.57 0 1057995..1058639 + 214 126465994 - Smar_1099 - TrkA domain-containing protein 1082 34.22 0 1058644..1059435 + 263 126465995 - Smar_1100 - hypothetical protein 1083 32.95 0 1059427..1060716 - 429 126465996 - Smar_1101 - RNA modification protein 1084 36.13 0 1060828..1061256 + 142 126465997 - Smar_1102 - translation initiation factor 2 subunit beta (aeIF-2b) 1085 29.97 -1 1061350..1061676 + 108 126465998 - Smar_1103 - hypothetical protein 1086 34.07 0 1061699..1062784 + 361 126465999 - Smar_1104 - NMD protein affecting ribosome stability and mRNA decay-like protein 1087 41.07 +1 1062777..1063112 + 111 126466000 - Smar_1105 - translation initiation factor 1A (aeIF-1A) 1088 33.70 0 1063109..1063918 + 269 126466001 - Smar_1106 - protein of unknown function RIO1 1089 36.65 0 1063891..1064493 + 200 126466002 - Smar_1107 - putative RNA-processing protein 1090 34.54 0 1064656..1065564 + 302 126466003 - Smar_1108 - hypothetical protein 1091 34.49 0 1066455..1066886 - 143 126466004 - Smar_1109 - glycine cleavage system protein H 1092 37.73 0 1066933..1068252 - 439 126466005 glyA Smar_1110 - serine hydroxymethyltransferase 1093 37.20 0 1068321..1069433 + 370 126466006 - Smar_1111 - ATP-NAD/AcoX kinase 1094 38.99 0 1069434..1070546 - 370 126466007 gcvT Smar_1112 - glycine cleavage system aminomethyltransferase T 1095 36.17 0 1070636..1072045 + 469 126466008 - Smar_1113 - glycine dehydrogenase subunit 1 1096 38.76 0 1072051..1073616 + 521 126466009 - Smar_1114 - glycine dehydrogenase subunit 2 1097 34.37 0 1073635..1074990 + 451 126466010 - Smar_1115 - dihydrolipoamide dehydrogenase 1098 35.84 0 1074995..1076473 - 492 126466011 - Smar_1116 - hypothetical protein 1099 36.87 0 1076590..1076985 + 131 126466012 - Smar_1117 - translation initiation factor IF-5A 1100 33.60 0 1076989..1077732 + 247 126466013 - Smar_1118 - spermidine synthase 1101 29.13 -1 1077729..1078085 - 118 126466014 - Smar_1119 - hypothetical protein 1102 30.56 -1 1078048..1078983 - 311 126466015 - Smar_1120 - amidohydrolase-like protein 1103 35.69 0 1078956..1082897 - 1313 126466016 - Smar_1121 - reverse gyrase 1104 38.62 0 1082989..1083744 - 251 126466017 - Smar_1122 - hypothetical protein 1105 40.28 +1 1083878..1086079 + 733 126466018 - Smar_1123 - AAA family ATPase, CDC48 subfamily protein 35.91 MEAN 3.41 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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