version 1.0
Staphylococcus epidermidis RP62A, complete genome - 1..2616530 2494 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 788 31.55 0 806687..807190 + 167 57866698 rimM SERP0805 - 16S rRNA processing protein RimM 789 35.09 0 807190..807927 + 245 57866699 trmD SERP0806 - tRNA (guanine-N1)-methyltransferase 790 37.89 +1 808032..808382 + 116 57866700 rplS SERP0807 - 50S ribosomal protein L19 791 28.64 0 811159..813759 - 866 57866701 - SERP0809 - hypothetical protein 792 21.82 -2 813903..814067 + 54 57866702 - SERP0810 - hypothetical protein 793 32.18 0 814088..814951 + 287 57866703 rbgA SERP0811 - ribosomal biogenesis GTPase 794 33.33 0 814956..815726 + 256 57866704 rnhB SERP0812 - ribonuclease HII 795 35.90 +1 815834..817000 + 388 57866713 sucC SERP0813 - succinyl-CoA synthetase subunit beta 796 38.50 +1 817022..817930 + 302 57866714 sucD SERP0814 - succinyl-CoA synthetase subunit alpha 797 33.10 0 818735..819607 + 290 57866715 - SERP0815 - DNA processing protein DprA, putative 798 34.83 0 819790..821859 + 689 57866716 topA SERP0816 - DNA topoisomerase I 799 35.40 0 821884..823191 + 435 57866717 - SERP0817 - tRNA (uracil-5-)-methyltransferase Gid 800 30.19 0 823416..824306 + 296 57866718 xerC SERP0818 - tyrosine recombinase XerC 801 38.67 +1 824310..824852 + 180 57866719 hslV SERP0819 - ATP-dependent protease peptidase subunit 802 34.05 0 824921..826324 + 467 57866720 hslU SERP0820 - ATP-dependent protease ATP-binding subunit 803 31.91 0 826348..827118 + 256 57866728 codY SERP0821 - transcriptional repressor CodY 804 25.00 -1 827327..827422 + 31 57866729 - SERP0822 - hypothetical protein 805 35.11 0 827481..828269 + 262 57866730 rpsB SERP0823 - 30S ribosomal protein S2 806 35.49 0 828421..829299 + 292 57866731 tsf SERP0824 - elongation factor Ts 807 36.51 +1 829440..830162 + 240 57866732 pyrH SERP0825 - uridylate kinase 808 33.87 0 830179..830733 + 184 57866733 frr SERP0826 - ribosome recycling factor 809 31.78 0 830954..831724 + 256 57866734 uppS SERP0827 - undecaprenyl diphosphate synthase 810 31.67 0 831728..832510 + 260 57866735 cdsA SERP0828 - phosphatidate cytidylyltransferase 811 32.87 0 832744..834030 + 428 57866744 - SERP0829 - membrane-associated zinc metalloprotease, putative 812 34.39 0 834049..835752 + 567 57866745 proS SERP0830 - prolyl-tRNA synthetase 813 34.01 0 836002..840312 + 1436 57866746 - SERP0831 - DNA polymerase III PolC 814 29.70 0 840491..840958 + 155 57866747 - SERP0832 - hypothetical protein 815 35.54 0 840979..842202 + 407 57866748 nusA SERP0833 - transcription elongation factor NusA 816 30.88 0 842220..842504 + 94 57866749 - SERP0834 - hypothetical protein 817 29.56 0 842504..842821 + 105 57866750 - SERP0835 - 30S ribosomal protein L7Ae, putative 818 34.03 0 842826..844988 + 720 57866759 infB SERP0836 - translation initiation factor IF-2 819 31.34 0 845291..845641 + 116 57866760 rbfA SERP0837 - ribosome-binding factor A 820 31.05 0 845779..846696 + 305 57866761 truB SERP0838 - tRNA pseudouridine synthase B 821 34.05 0 846712..847683 + 323 57866762 ribF SERP0839 - riboflavin biosynthesis protein RibF 822 35.19 0 847803..848072 + 89 57866763 rpsO SERP0840 - 30S ribosomal protein S15 823 37.32 +1 848204..850309 + 701 57866764 pnp SERP0841 - polynucleotide phosphorylase/polyadenylase 824 34.39 0 850644..852350 + 568 57866765 - SERP0842 - metallo-beta-lactamase family protein 825 32.66 0 852616..855009 + 797 57866766 - SERP0843 - FtsK/SpoIIIE family protein 826 31.79 0 855012..855725 + 237 57866775 - SERP0844 - transcriptional regulator, putative 827 29.40 0 855756..857027 + 423 57866776 - SERP0845 - hypothetical protein 828 31.78 0 857027..858316 + 429 57866777 - SERP0846 - M16 family peptidase 829 34.04 0 858313..859017 + 234 57866778 - SERP0847 - short chain dehydrogenase/reductase family protein 830 33.21 0 859170..859997 + 275 57866779 - SERP0848 - ACT domain-containing protein 831 31.81 0 860016..860408 + 130 57866780 - SERP0849 - Cro/CI family transcriptional regulator 832 31.62 0 860437..861018 + 193 57866781 pgsA SERP0850 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 833 30.98 0 861468..862616 + 382 57866789 - SERP0851 - competence/damage-inducible protein CinA, putative 834 36.67 +1 862787..863836 + 349 57866790 recA SERP0852 - recombinase A 835 34.94 0 864062..865621 + 519 57866791 - SERP0853 - phosphodiesterase 836 26.85 -1 865710..865925 - 71 57866792 - SERP0854 - hypothetical protein 837 34.34 0 866089..866883 + 264 57866793 - SERP0855 - hypothetical protein 838 35.89 +1 866996..868756 + 586 57866794 - SERP0856 - pyruvate ferredoxin oxidoreductase, alpha subunit 839 35.64 0 868757..869623 + 288 57866795 - SERP0857 - 2-oxoglutarate ferredoxin oxidoreductase subunit beta 840 35.28 0 870209..870826 + 205 57866796 - SERP0858 - hypothetical protein 841 30.58 0 870883..871173 + 96 57866804 - SERP0859 - hypothetical protein 842 33.07 0 871516..873060 + 514 57866805 miaB SERP0860 - tRNA-i(6)A37 modification enzyme MiaB 843 27.60 -1 873062..873427 + 121 57866806 - SERP0861 - hypothetical protein 844 31.72 0 873451..873945 + 164 57866807 - SERP0862 - hypothetical protein 845 32.27 0 874143..876764 + 873 57866808 hexA SERP0863 - DNA mismatch repair protein 846 32.09 0 876779..878716 + 645 57866809 hexB SERP0864 - DNA mismatch repair protein HexB 847 31.65 0 878730..879263 + 177 57866818 glpP SERP0865 - glycerol uptake operon antiterminator regulatory protein 848 36.36 +1 879638..880462 + 274 57866819 glpF SERP0866 - glycerol uptake facilitator protein 849 35.93 +1 880616..882115 + 499 57866820 glpK SERP0867 - glycerol kinase 850 34.71 0 882292..883965 + 557 57866821 glpD SERP0868 - aerobic glycerol-3-phosphate dehydrogenase 851 32.25 0 884189..885115 + 308 57866822 - SERP0869 - alpha/beta fold family hydrolase 852 31.63 0 885127..886125 + 332 57866823 miaA SERP0870 - tRNA delta(2)-isopentenylpyrophosphate transferase 853 32.92 0 886079..886318 + 79 57866824 - SERP0871 - host factor-I protein, putative 854 32.49 0 886540..887016 - 158 57866833 gpxA-1 SERP0872 - glutathione peroxidase 855 33.33 0 887117..888367 + 416 57866834 - SERP0873 - GTP-binding protein, putative 856 34.79 0 888383..889621 + 412 57866835 - SERP0874 - hypothetical protein 857 33.61 0 890102..890467 + 121 57866836 glnR SERP0875 - glutamine synthetase repressor 858 35.12 0 890486..891826 + 446 57866837 femC SERP0876 - glutamine synthetase FemC 859 27.92 -1 892406..892645 + 79 57866773 - SERP0878 - portal protein, truncation 860 30.88 0 892710..894056 + 448 57866774 - SERP0879 - hypothetical protein 861 21.88 -2 894062..894253 + 63 57866782 - SERP0880 - hypothetical protein 862 29.24 0 895252..895935 - 227 57866783 - SERP0882 - surface lipoprotein-related protein 863 34.50 0 896005..897030 - 341 57866784 - SERP0883 - hypothetical protein 864 30.81 0 897344..897541 + 65 57866785 - SERP0884 - hypothetical protein 865 31.09 0 897599..899071 + 490 57866786 cls-1 SERP0885 - cardiolipin synthetase 866 26.83 -1 899249..900124 + 291 57866787 - SERP0886 - ABC transporter, ATP-binding protein 867 29.51 0 900121..900852 + 243 57866788 - SERP0887 - ABC transporter, permease protein 868 26.58 -1 900852..901946 + 364 57866797 - SERP0888 - sensor histidine kinase, putative 869 32.01 0 901943..902545 + 200 57866798 - SERP0889 - LuxR family DNA-binding response regulator 870 30.16 0 902714..902902 - 62 57866799 - SERP0890 - hypothetical protein 871 32.22 0 903067..903603 + 178 57866800 - SERP0891 - thermonuclease precursor family protein 872 29.55 0 904340..905212 - 290 57866801 - SERP0893 - hypothetical protein 873 23.02 -2 905415..905540 - 41 57866802 - SERP0894 - hypothetical protein 874 26.83 -1 905539..906138 + 199 57866803 - SERP0895 - hypothetical protein 875 31.66 0 906216..907592 - 458 57866810 - SERP0896 - aspartate kinase 876 32.24 0 907781..909061 + 426 57866811 hom SERP0897 - homoserine dehydrogenase 877 33.71 0 909067..910131 + 354 57866812 thrC SERP0898 - threonine synthase 878 34.42 0 910133..911053 + 306 57866813 thrB SERP0899 - homoserine kinase 879 31.85 0 911116..911922 + 268 57866814 - SERP0900 - HAD superfamily hydrolase 880 34.92 0 912254..912568 - 104 57866815 - SERP0901 - hypothetical protein 881 32.30 0 912874..914322 - 482 57866816 - SERP0902 - amino acid permease family protein 882 37.16 +1 914553..916067 + 504 57866817 katA SERP0903 - catalase 883 30.00 0 916157..916306 + 49 57866825 rpmG SERP0904 - 50S ribosomal protein L33 884 31.85 0 916473..916742 + 89 57866826 rpsN SERP0905 - 30S ribosomal protein S14 885 33.44 0 916896..917873 + 325 57866827 guaC SERP0906 - guanosine 5'-monophosphate oxidoreductase 886 30.12 0 917887..918912 + 341 57866828 - SERP0907 - hypothetical protein 887 23.53 -2 918967..919068 + 33 57866829 - SERP0908 - hypothetical protein 32.10 MEAN 3.66 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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