IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
922	 26.50	-1	1014600..1014716	-	38	21282651	-	MW0922	-	hypothetical protein
923	 27.31	-1	1014795..1015010	-	71	21282652	-	MW0923	-	hypothetical protein
924	 31.06	0	1015244..1015726	+	160	21282653	-	MW0924	-	hypothetical protein
925	 34.82	0	1015777..1016715	-	312	21282654	-	MW0925	-	1,4-dihydroxy-2-naphthoate octaprenyltransferase
926	 32.01	0	1016897..1018258	+	453	21282655	-	MW0926	-	hypothetical protein
927	 33.87	0	1018245..1019918	+	557	21282656	menD	MW0927	-	menaquinone biosynthesis protein
928	 32.84	0	1019905..1020708	+	267	21282657	-	MW0928	-	hypothetical protein
929	 38.56	+1	1020701..1021522	+	273	21282658	menB	MW0929	-	naphthoate synthase
930	 31.21	0	1021760..1022089	-	109	21282659	sspC	MW0930	-	cysteine protease
931	 30.20	0	1022127..1023308	-	393	21282660	sspB	MW0931	-	cysteine protease precursor
932	 36.99	+1	1023390..1024373	-	327	21282661	sspA	MW0932	-	serine protease; V8 protease; glutamyl endopeptidase
933	 31.95	0	1024901..1026055	-	384	21282662	-	MW0933	-	hypothetical protein
934	 27.20	-1	1026251..1027261	-	336	21282663	-	MW0934	-	hypothetical protein
935	 31.67	0	1027414..1027833	+	139	21282664	-	MW0935	-	hypothetical protein
936	 34.98	0	1028040..1031810	-	1256	21282665	atl	MW0936	-	autolysin
937	 34.71	0	1032038..1032472	-	144	21282666	-	MW0937	-	hypothetical protein
938	 30.79	0	1032627..1033097	-	156	21282667	-	MW0938	-	hypothetical protein
939	 32.43	0	1033145..1034362	-	405	21282668	-	MW0939	-	hypothetical protein
940	 28.39	-1	1034813..1036006	+	397	21282669	fmt	MW0940	-	autolysis and methicillin resistant-related protein
941	 35.40	0	1036543..1036833	-	96	21282670	-	MW0941	-	hypothetical protein
942	 35.97	0	1036830..1037435	-	201	21282671	qoxC	MW0942	-	quinol oxidase polypeptide III QoxC
943	 36.85	+1	1037425..1039413	-	662	21282672	qoxB	MW0943	-	quinol oxidase polypeptide I QoxB
944	 34.42	0	1039413..1040513	-	366	21282673	-	MW0944	-	hypothetical protein
945	 32.39	0	1041085..1041402	-	105	21282674	-	MW0945	-	hypothetical protein
946	 34.38	0	1042185..1043045	-	286	21282675	folD	MW0946	-	FolD bifunctional protein
947	 38.51	+1	1043246..1043728	+	160	21282676	-	MW0947	-	hypothetical protein
948	 32.80	0	1043715..1044839	+	374	21282677	purK	MW0948	-	phosphoribosylaminoimidazole carboxylase ATPase subunit
949	 28.94	-1	1044843..1045547	+	234	21282678	purC	MW0949	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
950	 32.58	0	1045547..1045810	+	87	21282679	-	MW0950	-	hypothetical protein
951	 34.82	0	1045812..1046483	+	223	21282680	purQ	MW0951	-	phosphoribosylformylglycinamidine synthase I
952	 35.16	0	1046476..1048665	+	729	21282681	purL	MW0952	-	phosphoribosylformylglycinamidine synthase II
953	 35.89	0	1048644..1050128	+	494	21282682	purF	MW0953	-	amidophosphoribosyltransferase
954	 35.76	0	1050121..1051149	+	342	21282683	purM	MW0954	-	phosphoribosylaminoimidazole synthetase
955	 32.45	0	1051152..1051718	+	188	21282684	purN	MW0955	-	phosphoribosylglycinamide formyltransferase
956	 34.75	0	1051730..1053211	+	493	21282685	purH	MW0956	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
957	 35.66	0	1053233..1054480	+	415	21282686	purD	MW0957	-	phosphoribosylamine--glycine ligase
958	 30.98	0	1054745..1055551	-	268	21282687	-	MW0958	-	hypothetical protein
959	 33.33	0	1055544..1056944	-	466	21282688	-	MW0959	-	hypothetical protein
960	 37.15	+1	1056959..1057534	-	191	21282689	-	MW0960	-	hypothetical protein
961	 22.22	-2	1058055..1058189	-	44	21282690	-	MW0961	-	hypothetical protein
962	 29.17	-1	1058341..1059636	+	431	21282691	-	MW0962	-	hypothetical protein
963	 31.37	0	1060061..1061233	+	390	21282692	-	MW0963	-	hypothetical protein
964	 30.57	0	1061287..1061829	+	180	21282693	-	MW0964	-	hypothetical protein
965	 34.83	0	1061983..1062249	+	88	21282694	ptsH	MW0965	-	phosphocarrier protein HPr
966	 35.25	0	1062252..1063970	+	572	21282695	ptsI	MW0966	-	phosphoenolpyruvate-protein phosphatase
967	 28.63	-1	1064207..1064440	-	77	21282696	-	MW0967	-	hypothetical protein
968	 33.85	0	1064638..1065999	+	453	21282697	-	MW0968	-	hypothetical protein
969	 30.49	0	1065996..1067015	+	339	21282698	-	MW0969	-	hypothetical protein
970	 35.14	0	1067148..1067810	+	220	21282699	-	MW0970	-	hypothetical protein
971	 42.31	+2	1067828..1067983	+	51	21282700	-	MW0971	-	hypothetical protein
972	 33.86	0	1068159..1069856	-	565	21282701	-	MW0972	-	hypothetical protein
973	 31.51	0	1069856..1070074	-	72	21282702	-	MW0973	-	hypothetical protein
974	 35.14	0	1070556..1071107	-	183	21282703	def	MW0974	-	peptide deformylase
975	 29.03	-1	1071472..1072098	+	208	21282704	-	MW0975	-	hypothetical protein
976	 37.29	+1	1072269..1073381	+	370	21282705	-	MW0976	-	pyrubate dehydrogenase E1 component alpha subunit
977	 38.34	+1	1073385..1074362	+	325	21282706	phdB	MW0977	-	pyruvate dehydrogenase E1 component beta subunit
978	 37.90	+1	1074453..1075745	+	430	21282707	pdhC	MW0978	-	branched-chain alpha-keto acid dehydrogenase subunit E2
979	 36.96	+1	1075749..1077155	+	468	21282708	pdhD	MW0979	-	dihydrolipoamide dehydrogenase
980	 32.25	0	1077323..1077598	+	91	21282709	-	MW0980	-	hypothetical protein
981	 29.81	0	1077742..1078281	+	179	21282710	-	MW0981	-	hypothetical protein
982	 31.14	0	1078294..1079388	+	364	21282711	potA	MW0982	-	hypothetical protein
983	 27.19	-1	1079381..1080178	+	265	21282712	potB	MW0983	-	hypothetical protein
984	 30.37	0	1080184..1080993	+	269	21282713	potC	MW0984	-	hypothetical protein
985	 31.56	0	1080993..1082066	+	357	21282714	potD	MW0985	-	hypothetical protein
986	 31.67	0	1082140..1083159	+	339	21282715	-	MW0986	-	hypothetical protein
987	 29.29	-1	1083442..1083861	+	139	21282716	-	MW0987	-	hypothetical protein
988	 32.30	0	1083943..1085295	-	450	21282717	-	MW0988	-	hypothetical protein
989	 33.01	0	1085479..1086093	-	204	21282718	-	MW0989	-	hypothetical protein
990	 34.66	0	1086250..1087077	+	275	21282719	-	MW0990	-	hypothetical protein
991	 26.56	-1	1087231..1087422	-	63	21282720	-	MW0991	-	hypothetical protein
992	 35.23	0	1087524..1089371	+	615	21282721	-	MW0992	-	hypothetical protein
993	 36.90	+1	1089511..1089678	-	55	21282722	-	MW0993	-	hypothetical protein
994	 31.88	0	1089680..1090162	-	160	21282723	-	MW0994	-	hypothetical protein
995	 31.52	0	1090303..1090578	+	91	21282724	-	MW0995	-	hypothetical protein
996	 31.21	0	1090892..1092118	+	408	21282725	-	MW0996	-	hypothetical protein
997	 35.53	0	1092672..1096124	+	1150	21282726	pycA	MW0997	-	pyruvate carboxylase
998	 33.66	0	1096264..1097175	-	303	21282727	-	MW0998	-	hypothetical protein
999	 32.02	0	1097615..1098526	+	303	21282728	ctaB	MW0999	-	protoheme IX farnesyltransferase
1000	 32.68	0	1098551..1099012	+	153	21282729	-	MW1000	-	hypothetical protein
1001	 30.15	0	1099339..1100376	+	345	21282730	-	MW1001	-	hypothetical protein
1002	 35.17	0	1100392..1100826	+	144	21282731	-	MW1002	-	hypothetical protein
1003	 36.25	0	1100889..1101815	-	308	21282732	-	MW1003	-	hypothetical protein
1004	 27.06	-1	1102054..1102308	+	84	21282733	-	MW1004	-	hypothetical protein
1005	 29.74	0	1102311..1102700	-	129	21282734	-	MW1005	-	hypothetical protein
1006	 31.68	0	1102770..1103312	+	180	21282735	-	MW1006	-	hypothetical protein
1007	 30.85	0	1103314..1103796	+	160	21282736	-	MW1007	-	hypothetical protein
1008	 32.28	0	1103858..1104997	-	379	21282737	-	MW1008	-	hypothetical protein
1009	 33.87	0	1105124..1105681	+	185	21282738	-	MW1009	-	hypothetical protein
1010	 36.78	+1	1105761..1105934	+	57	21282739	rpmF	MW1010	-	50S ribosomal protein L32
1011	 32.56	0	1106088..1108025	-	645	21282740	isdB	MW1011	-	hypothetical protein
1012	 33.52	0	1108228..1109280	-	350	21282741	isdA	MW1012	-	cell surface protein
1013	 32.02	0	1109489..1110172	+	227	21282742	isdC	MW1013	-	hypothetical protein
1014	 28.60	-1	1110172..1111248	+	358	21282743	isdD	MW1014	-	hypothetical protein
1015	 30.83	0	1111245..1112123	+	292	21282744	isdE	MW1015	-	hypothetical protein
1016	 32.71	0	1112136..1113101	+	321	21282745	isdF	MW1016	-	hypothetical protein
1017	 27.07	-1	1113163..1113897	+	244	21282746	srtB	MW1017	-	NPQTN specific sortase B
1018	 30.86	0	1113916..1114239	+	107	21282747	isdG	MW1018	-	heme-degrading monooxygenase IsdG
1019	 30.56	0	1114276..1114383	+	35	21282748	-	MW1019	-	hypothetical protein
1020	 35.36	0	1114623..1115363	+	246	21282749	-	MW1020	-	hypothetical protein
1021	 34.56	0	1115744..1116802	+	352	21282750	pheS	MW1021	-	phenylalanyl-tRNA synthetase subunit alpha
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.