IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
844	 33.48	0	928831..930162	+	443	21282573	pgi	MW0844	-	glucose-6-phosphate isomerase
845	 30.73	0	930487..931062	+	191	21282574	-	MW0845	-	hypothetical protein
846	 31.05	0	931067..931591	+	174	21282575	spsA	MW0846	-	type-I signal peptidase
847	 30.21	0	931607..932182	+	191	21282576	spsB	MW0847	-	type-1 signal peptidase 1B
848	 32.27	0	932342..935818	+	1158	21282577	-	MW0848	-	hypothetical protein
849	 33.42	0	935819..939472	+	1217	21282578	-	MW0849	-	hypothetical protein
850	 32.89	0	939638..940540	+	300	21282579	-	MW0850	-	hypothetical protein
851	 33.08	0	940869..941258	+	129	21282580	-	MW0851	-	hypothetical protein
852	 35.46	0	941430..942746	-	438	21282581	cdr	MW0852	-	coenzyme A disulfide reductase
853	 31.52	0	942798..943622	-	274	21282582	-	MW0853	-	hypothetical protein
854	 35.92	0	943736..944044	+	102	21282583	-	MW0854	-	hypothetical protein
855	 35.48	0	944041..944133	-	30	21282584	-	MW0855	-	hypothetical protein
856	 30.63	0	944592..946406	+	604	21282585	-	MW0856	-	hypothetical protein
857	 33.75	0	946609..949218	+	869	21282586	clpB	MW0857	-	hypothetical protein
858	 27.24	-1	949277..950146	-	289	21282587	-	MW0858	-	hypothetical protein
859	 26.88	-1	950256..951401	+	381	21282588	-	MW0859	-	hypothetical protein
860	 25.55	-2	951385..952026	+	213	21282589	-	MW0860	-	hypothetical protein
861	 23.59	-2	952019..953137	+	372	21282590	-	MW0861	-	hypothetical protein
862	 31.59	0	953121..953636	+	171	21282591	-	MW0862	-	hypothetical protein
863	 32.87	0	953947..954381	+	144	21282592	-	MW0863	-	hypothetical protein
864	 34.41	0	954638..954823	-	61	21282593	-	MW0864	-	hypothetical protein
865	 35.46	0	955118..956059	+	313	21282594	fabH	MW0865	-	3-oxoacyl-(acyl carrier protein) synthase III
866	 38.88	+1	956071..957315	+	414	21282595	fab	MW0866	-	3-oxoacyl- synthase
867	 26.61	-1	957370..957741	-	123	21282596	-	MW0867	-	hypothetical protein
868	 32.79	0	957984..958910	+	308	21282597	oppB	MW0868	-	oligopeptide transport system permease protein
869	 33.71	0	958910..959980	+	356	21282598	-	MW0869	-	hypothetical protein
870	 35.46	0	959996..961078	+	360	21282599	oppD	MW0870	-	hypothetical protein
871	 33.01	0	961068..962009	+	313	21282600	oppF	MW0871	-	hypothetical protein
872	 32.85	0	962028..963683	+	551	21282601	-	MW0872	-	hypothetical protein
873	 32.11	0	963895..965610	+	571	21282602	-	MW0873	-	hypothetical protein
874	 29.99	0	965661..966647	+	328	21282603	-	MW0874	-	hypothetical protein
875	 30.58	0	966650..967630	+	326	21282604	appF	MW0875	-	hypothetical protein
876	 27.93	-1	967623..968585	+	320	21282605	oppB	MW0876	-	oligopeptide transport system permease protein OppB
877	 31.41	0	968597..969478	+	293	21282606	-	MW0877	-	hypothetical protein
878	 34.65	0	969520..970509	-	329	21282607	trpS	MW0878	-	tryptophanyl-tRNA synthetase
879	 32.58	0	970804..971199	+	131	21282608	spxA	MW0879	-	transcriptional regulator Spx
880	 31.67	0	971570..972289	+	239	21282609	-	MW0880	-	adaptor protein
881	 28.27	-1	972410..973396	+	328	21282610	-	MW0881	-	hypothetical protein
882	 31.95	0	973444..975252	+	602	21282611	-	MW0882	-	hypothetical protein
883	 30.36	0	975712..976518	-	268	21282612	-	MW0883	-	hypothetical protein
884	 34.97	0	976541..976906	-	121	21282613	-	MW0884	-	hypothetical protein
885	 29.80	0	977010..977603	-	197	21282614	-	MW0885	-	hypothetical protein
886	 28.74	-1	977789..978136	+	115	21282615	-	MW0886	-	hypothetical protein
887	 33.65	0	978153..978788	+	211	21282616	-	MW0887	-	GTP pyrophosphokinase
888	 35.06	0	978805..979614	+	269	21282617	ppnK	MW0888	-	inorganic polyphosphate/ATP-NAD kinase
889	 30.53	0	979611..980465	+	284	21282618	-	MW0889	-	hypothetical protein
890	 33.26	0	980486..981871	+	461	21282619	-	MW0890	-	hypothetical protein
891	 31.65	0	981881..983725	+	614	21282620	-	MW0891	-	hypothetical protein
892	 35.15	0	984003..984773	+	256	21282621	fabI	MW0892	-	enoyl-(acyl carrier protein) reductase
893	 31.31	0	984968..986053	-	361	21282622	-	MW0893	-	hypothetical protein
894	 35.69	0	986395..987963	+	522	21282623	-	MW0894	-	hypothetical protein
895	 31.88	0	988108..988866	+	252	21282624	-	MW0895	-	hypothetical protein
896	 34.31	0	989060..989569	+	169	21282625	-	MW0896	-	hypothetical protein
897	 32.33	0	989682..990872	-	396	21282626	-	MW0897	-	hypothetical protein
898	 32.91	0	990850..992025	-	391	21282627	-	MW0898	-	diacylglycerol glucosyltransferase
899	 36.97	+1	992458..993942	+	494	21282628	murE	MW0899	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase
900	 30.95	0	993932..994183	+	83	21282629	-	MW0900	-	hypothetical protein
901	 33.91	0	994183..995745	+	520	21282630	prfC	MW0901	-	peptide chain release factor 3
902	 36.69	+1	996047..996850	+	267	21282631	-	MW0902	-	hypothetical protein
903	 31.34	0	997084..999393	+	769	21282632	htrA	MW0903	-	serine protease HtrA
904	 31.86	0	999410..1000768	+	452	21282633	-	MW0904	-	hypothetical protein
905	 32.08	0	1000904..1002418	+	504	21282634	-	MW0905	-	hypothetical protein
906	 30.18	0	1002905..1003474	-	189	21282635	-	MW0906	-	hypothetical protein
907	 33.79	0	1003684..1003902	+	72	21282636	-	MW0907	-	hypothetical protein
908	 30.60	0	1003983..1004969	-	328	21282637	-	MW0908	-	hypothetical protein
909	 30.51	0	1005168..1005344	+	58	21282638	-	MW0909	-	hypothetical protein
910	 27.20	-1	1005359..1005961	+	200	21282639	-	MW0910	-	hypothetical protein
911	 25.93	-2	1006172..1006279	+	35	21282640	-	MW0911	-	hypothetical protein
912	 35.53	0	1006929..1007201	+	90	21282641	-	MW0912	-	hypothetical protein
913	 24.66	-2	1007245..1007613	+	122	21282642	-	MW0913	-	hypothetical protein
914	 26.99	-1	1007727..1009208	+	493	21282643	-	MW0914	-	hypothetical protein
915	 30.84	0	1009211..1009531	+	106	21282644	-	MW0915	-	hypothetical protein
916	 28.04	-1	1009528..1010169	+	213	21282645	-	MW0916	-	hypothetical protein
917	 26.83	-1	1010257..1010502	-	81	21282646	-	MW0917	-	hypothetical protein
918	 22.22	-2	1010888..1011175	+	95	21282647	-	MW0918	-	hypothetical protein
919	 26.92	-1	1011181..1012662	+	493	21282648	-	MW0919	-	hypothetical protein
920	 31.93	0	1012751..1013107	-	118	21282649	-	MW0920	-	hypothetical protein
921	 34.27	0	1013595..1014554	+	319	21282650	-	MW0921	-	hypothetical protein
922	 26.50	-1	1014600..1014716	-	38	21282651	-	MW0922	-	hypothetical protein
923	 27.31	-1	1014795..1015010	-	71	21282652	-	MW0923	-	hypothetical protein
924	 31.06	0	1015244..1015726	+	160	21282653	-	MW0924	-	hypothetical protein
925	 34.82	0	1015777..1016715	-	312	21282654	-	MW0925	-	1,4-dihydroxy-2-naphthoate octaprenyltransferase
926	 32.01	0	1016897..1018258	+	453	21282655	-	MW0926	-	hypothetical protein
927	 33.87	0	1018245..1019918	+	557	21282656	menD	MW0927	-	menaquinone biosynthesis protein
928	 32.84	0	1019905..1020708	+	267	21282657	-	MW0928	-	hypothetical protein
929	 38.56	+1	1020701..1021522	+	273	21282658	menB	MW0929	-	naphthoate synthase
930	 31.21	0	1021760..1022089	-	109	21282659	sspC	MW0930	-	cysteine protease
931	 30.20	0	1022127..1023308	-	393	21282660	sspB	MW0931	-	cysteine protease precursor
932	 36.99	+1	1023390..1024373	-	327	21282661	sspA	MW0932	-	serine protease; V8 protease; glutamyl endopeptidase
933	 31.95	0	1024901..1026055	-	384	21282662	-	MW0933	-	hypothetical protein
934	 27.20	-1	1026251..1027261	-	336	21282663	-	MW0934	-	hypothetical protein
935	 31.67	0	1027414..1027833	+	139	21282664	-	MW0935	-	hypothetical protein
936	 34.98	0	1028040..1031810	-	1256	21282665	atl	MW0936	-	autolysin
937	 34.71	0	1032038..1032472	-	144	21282666	-	MW0937	-	hypothetical protein
938	 30.79	0	1032627..1033097	-	156	21282667	-	MW0938	-	hypothetical protein
939	 32.43	0	1033145..1034362	-	405	21282668	-	MW0939	-	hypothetical protein
940	 28.39	-1	1034813..1036006	+	397	21282669	fmt	MW0940	-	autolysis and methicillin resistant-related protein
941	 35.40	0	1036543..1036833	-	96	21282670	-	MW0941	-	hypothetical protein
942	 35.97	0	1036830..1037435	-	201	21282671	qoxC	MW0942	-	quinol oxidase polypeptide III QoxC
943	 36.85	+1	1037425..1039413	-	662	21282672	qoxB	MW0943	-	quinol oxidase polypeptide I QoxB
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.