IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
739	 31.81	0	834416..834874	+	152	21282468	-	MW0739	-	hypothetical protein
740	 30.34	0	834941..835174	+	77	21282469	secG	MW0740	-	preprotein translocase subunit SecG
741	 33.33	0	835290..836030	+	246	21282470	-	MW0741	-	hypothetical protein
742	 34.22	0	836064..838436	+	790	21282471	rnr	MW0742	-	ribonuclease R
743	 36.13	0	838458..838922	+	154	21282472	smpB	MW0743	-	SsrA-binding protein
744	 21.30	-2	839478..839693	-	71	21282473	-	MW0744	-	hypothetical protein
745	 33.78	0	839705..840820	-	371	21282474	int	MW0745	-	hypothetical protein
746	 22.90	-2	840826..841563	-	245	21282475	-	MW0746	-	hypothetical protein
747	 30.14	0	841715..841933	+	72	21282476	-	MW0747	-	hypothetical protein
748	 26.53	-1	841945..842091	+	48	21282477	-	MW0748	-	hypothetical protein
749	 30.22	0	842084..842308	+	74	21282478	-	MW0749	-	hypothetical protein
750	 30.67	0	842309..842608	+	99	21282479	-	MW0750	-	hypothetical protein
751	 30.55	0	842700..845072	+	790	21282480	-	MW0751	-	putative primase
752	 31.59	0	845745..846089	+	114	21282481	-	MW0752	-	hypothetical protein
753	 26.57	-1	846314..846520	+	68	21282482	-	MW0753	-	hypothetical protein
754	 31.63	0	846507..847565	+	352	21282483	-	MW0754	-	hypothetical protein
755	 29.67	0	847747..848238	+	163	21282484	-	MW0755	-	hypothetical protein
756	 22.90	-2	848599..849576	+	325	21282485	-	MW0756	-	hypothetical protein
757	 19.79	-2	849592..850152	+	186	21282486	-	MW0757	-	hypothetical protein
758	 29.55	0	850452..851006	-	184	21282487	ear	MW0758	-	Ear
759	 29.59	0	851795..852595	+	266	21282488	sec4	MW0759	-	enterotoxin type C precursor
760	 28.22	-1	852762..853484	-	240	21282489	sel2	MW0760	-	extracellular enterotoxin L
761	 27.30	-1	854223..854951	-	242	21282490	-	MW0761	-	hypothetical protein
762	 27.78	-1	855549..856070	+	173	21282491	-	MW0762	-	hypothetical protein
763	 34.27	0	856209..856739	+	176	21282492	-	MW0763	-	hypothetical protein
764	 39.28	+1	857002..859842	+	946	21282493	clfA	MW0764	-	fibrinogen-binding protein
765	 28.30	-1	860063..860539	+	158	21282494	-	MW0765	-	truncated secreted von Willebrand factor-binding protein VWbp
766	 30.33	0	860591..861589	+	332	21282495	-	MW0766	-	truncated secreted von Willebrand factor-binding protein VWbp
767	 31.67	0	861940..862962	+	340	21282496	ssp	MW0767	-	extracellular ECM and plasma binding protein
768	 29.69	0	863297..863818	+	173	21282497	-	MW0768	-	hypothetical protein
769	 34.50	0	864159..864845	+	228	21282498	-	MW0769	-	staphylococcal nuclease
770	 39.80	+2	865202..865402	+	66	21282499	cspC	MW0770	-	cold-shock protein C
771	 31.05	0	865898..866116	-	72	21282500	-	MW0771	-	hypothetical protein
772	 27.72	-1	866178..866462	-	94	21282501	-	MW0772	-	hypothetical protein
773	 31.05	0	866550..867119	-	189	21282502	-	MW0773	-	hypothetical protein
774	 28.57	-1	867307..867495	-	62	21282503	-	MW0774	-	hypothetical protein
775	 24.90	-2	867524..867784	-	86	21282504	-	MW0775	-	hypothetical protein
776	 31.86	0	868124..868327	+	67	21282505	-	MW0776	-	hypothetical protein
777	 27.00	-1	868324..868560	-	78	21282506	-	MW0777	-	hypothetical protein
778	 34.71	0	868784..869365	+	193	21282507	-	MW0778	-	hypothetical protein
779	 30.91	0	869438..870055	-	205	21282508	-	MW0779	-	hypothetical protein
780	 29.49	0	870210..870704	-	164	21282509	-	MW0780	-	hypothetical protein
781	 35.70	0	871103..871525	-	140	21282510	-	MW0781	-	hypothetical protein
782	 32.50	0	871673..872389	+	238	21282511	-	MW0782	-	3-dehydroquinate dehydratase
783	 32.59	0	872472..873011	+	179	21282512	-	MW0783	-	hypothetical protein
784	 34.58	0	873161..873481	-	106	21282513	-	MW0784	-	hypothetical protein
785	 29.97	0	873625..873981	+	118	21282514	-	MW0785	-	hypothetical protein
786	 33.60	0	874139..874519	+	126	21282515	-	MW0786	-	glycine cleavage system protein H
787	 32.99	0	874698..875576	+	292	21282516	-	MW0787	-	hypothetical protein
788	 30.49	0	876317..876703	+	128	21282517	-	MW0788	-	hypothetical protein
789	 27.61	-1	876696..876992	+	98	21282518	-	MW0789	-	hypothetical protein
790	 34.80	0	877242..878267	+	341	21282519	-	MW0790	-	hypothetical protein
791	 34.91	0	878260..878955	+	231	21282520	-	MW0791	-	hypothetical protein
792	 29.93	0	878973..879794	+	273	21282521	-	MW0792	-	hypothetical protein
793	 29.74	0	880148..880342	+	64	21282522	-	MW0793	-	hypothetical protein
794	 33.10	0	880575..881426	-	283	21282523	-	MW0794	-	hypothetical protein
795	 33.86	0	881754..882515	+	253	21282524	-	MW0795	-	hypothetical protein
796	 34.17	0	882613..883920	+	435	21282525	-	MW0796	-	hypothetical protein
797	 37.28	+1	884035..885276	+	413	21282526	-	MW0797	-	hypothetical protein
798	 36.13	0	885266..885730	+	154	21282527	-	MW0798	-	hypothetical protein
799	 34.41	0	885881..887278	+	465	21282528	-	MW0799	-	hypothetical protein
800	 29.71	0	887465..887602	+	45	21282529	-	MW0800	-	hypothetical protein
801	 26.67	-1	887608..887922	-	104	21282530	-	MW0801	-	hypothetical protein
802	 32.47	0	888287..889327	+	346	21282531	-	MW0802	-	hypothetical protein
803	 37.64	+1	889341..890408	+	355	21282532	-	MW0803	-	hypothetical protein
804	 33.45	0	890584..891432	+	282	21282533	-	MW0804	-	hypothetical protein
805	 32.25	0	891445..892272	+	275	21282534	-	MW0805	-	hypothetical protein
806	 33.41	0	892299..893618	+	439	21282535	-	MW0806	-	hypothetical protein
807	 36.27	+1	893702..894619	+	305	21282536	lipA	MW0807	-	lipoyl synthase
808	 27.60	-1	894749..895132	+	127	21282537	-	MW0808	-	hypothetical protein
809	 31.84	0	895211..895477	-	88	21282538	-	MW0809	-	hypothetical protein
810	 29.89	0	895575..896009	+	144	21282539	-	MW0810	-	hypothetical protein
811	 35.00	0	896009..896788	+	259	21282540	-	MW0811	-	hypothetical protein
812	 34.17	0	896821..897780	+	319	21282541	-	MW0812	-	hypothetical protein
813	 26.14	-1	898192..898344	+	50	21282542	-	MW0813	-	hypothetical protein
814	 34.22	0	898360..899817	+	485	21282543	dltA	MW0814	-	D-alanine--D-alanyl carrier protein ligase
815	 29.96	0	899814..901028	+	404	21282544	dltB	MW0815	-	DltB membrane protein
816	 29.11	-1	901046..901282	+	78	21282545	dltC	MW0816	-	D-alanine--poly(phosphoribitol) ligase subunit 2
817	 32.06	0	901279..902454	+	391	21282546	dltD	MW0817	-	poly D-alanine transfer protein (glycerophosphate chain)
818	 39.51	+1	902717..902959	-	80	21282547	-	MW0818	-	hypothetical protein
819	 30.86	0	903060..903383	+	107	21282548	-	MW0819	-	hypothetical protein
820	 36.62	+1	903442..904506	-	354	21282549	-	MW0820	-	hypothetical protein
821	 35.02	0	904823..905059	+	78	21282550	-	MW0821	-	hypothetical protein
822	 37.22	+1	905072..905431	+	119	21282551	-	MW0822	-	hypothetical protein
823	 35.65	0	905885..907093	+	402	21282552	-	MW0823	-	hypothetical protein
824	 34.01	0	907224..908699	+	491	21282553	ampA	MW0824	-	cytosol aminopeptidase
825	 32.73	0	909110..910426	+	438	21282554	-	MW0825	-	hypothetical protein
826	 32.80	0	910445..910819	+	124	21282555	-	MW0826	-	hypothetical protein
827	 34.37	0	910875..912029	-	384	21282556	-	MW0827	-	hypothetical protein
828	 32.49	0	912278..912634	-	118	21282557	mnhG	MW0828	-	putative monovalent cation/H+ antiporter subunit G
829	 31.97	0	912612..912905	-	97	21282558	mnhF	MW0829	-	putative monovalent cation/H+ antiporter subunit F
830	 29.58	0	912905..913384	-	159	21282559	mnhE	MW0830	-	putative monovalent cation/H+ antiporter subunit E
831	 33.67	0	913386..914882	-	498	21282560	mnhD	MW0831	-	putative monovalent cation/H+ antiporter subunit D
832	 34.50	0	914875..915216	-	113	21282561	mnhC	MW0832	-	putative monovalent cation/H+ antiporter subunit C
833	 33.57	0	915216..915644	-	142	21282562	mnhB	MW0833	-	putative monovalent cation/H+ antiporter subunit B
834	 33.46	0	915637..918042	-	801	21282563	mnhA	MW0834	-	monovalent cation/H+ antiporter subunit A
835	 33.85	0	918173..918556	-	127	21282564	-	MW0835	-	hypothetical protein
836	 35.19	0	918620..919213	+	197	21282565	-	MW0836	-	hypothetical protein
837	 32.80	0	919628..920005	+	125	21282566	-	MW0837	-	hypothetical protein
838	 37.23	+1	920367..921494	+	375	21282567	-	MW0838	-	hypothetical protein
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.