IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
708	 30.63	0	794712..795782	-	356	21282437	-	MW0708	-	hypothetical protein
709	 31.63	0	796100..797155	+	351	21282438	llm	MW0709	-	lipophilic protein affecting lysis rate and methicillin resistance level protein
710	 34.11	0	797327..797968	-	213	21282439	-	MW0710	-	hypothetical protein
711	 34.26	0	798112..798978	+	288	21282440	-	MW0711	-	hypothetical protein
712	 31.84	0	799486..800424	+	312	21282441	-	MW0712	-	hypothetical protein
713	 30.96	0	800417..801091	+	224	21282442	-	MW0713	-	hypothetical protein
714	 33.16	0	801152..801724	+	190	21282443	-	MW0714	-	hypothetical protein
715	 34.99	0	802138..804669	+	843	21282444	secA	MW0715	-	preprotein translocase subunit SecA
716	 37.21	+1	805219..806094	+	291	21282445	prfB	MW0716	-	peptide chain release factor 2
717	 35.71	0	806503..807342	+	279	21282446	-	MW0717	-	hypothetical protein
718	 28.42	-1	807516..808166	+	216	21282447	-	MW0718	-	hypothetical protein
719	 30.38	0	808163..808399	+	78	21282448	-	MW0719	-	hypothetical protein
720	 35.09	0	808662..810653	+	663	21282449	uvrB	MW0720	-	excinuclease ABC subunit B
721	 35.41	0	810661..813507	+	948	21282450	uvrA	MW0721	-	exinuclease ABC subunit A
722	 35.58	0	814114..815046	+	310	21282451	hprK	MW0722	-	HPr kinase/phosphorylase
723	 32.50	0	815052..815891	+	279	21282452	lgt	MW0723	-	prolipoprotein diacylglyceryl transferase
724	 31.48	0	815899..816384	+	161	21282453	-	MW0724	-	hypothetical protein
725	 29.65	0	816392..817831	+	479	21282454	-	MW0725	-	hypothetical protein
726	 37.29	+1	817898..818833	+	311	21282455	trxB	MW0726	-	thioredoxine reductase
727	 31.47	0	819598..820509	+	303	21282456	-	MW0727	-	hypothetical protein
728	 33.43	0	820506..821501	+	331	21282457	-	MW0728	-	hypothetical protein
729	 32.70	0	821612..822556	+	314	21282458	-	MW0729	-	hypothetical protein
730	 34.35	0	823129..823716	+	195	21282459	clpP	MW0730	-	hypothetical protein
731	 33.78	0	823959..824861	-	300	21282460	-	MW0731	-	hypothetical protein
732	 35.40	0	825564..826193	+	209	21282461	-	MW0732	-	hypothetical protein
733	 37.48	+1	826835..827848	+	337	21282462	gapR	MW0733	-	glycolytic operon regulator
734	 37.98	+1	827901..828911	+	336	21282463	gap	MW0734	-	glyceraldehyde-3-phosphate dehydrogenase
735	 34.68	0	829050..830240	+	396	21282464	pgk	MW0735	-	phosphoglycerate kinase
736	 36.88	+1	830362..831123	+	253	21282465	tpi	MW0736	-	triosephosphate isomerase
737	 36.63	+1	831126..832643	+	505	21282466	pgm	MW0737	-	phosphoglyceromutase
738	 36.93	+1	832773..834077	+	434	21282467	eno	MW0738	-	enolase (2-phosphoglycerate dehydrogenase)
739	 31.81	0	834416..834874	+	152	21282468	-	MW0739	-	hypothetical protein
740	 30.34	0	834941..835174	+	77	21282469	secG	MW0740	-	preprotein translocase subunit SecG
741	 33.33	0	835290..836030	+	246	21282470	-	MW0741	-	hypothetical protein
742	 34.22	0	836064..838436	+	790	21282471	rnr	MW0742	-	ribonuclease R
743	 36.13	0	838458..838922	+	154	21282472	smpB	MW0743	-	SsrA-binding protein
744	 21.30	-2	839478..839693	-	71	21282473	-	MW0744	-	hypothetical protein
745	 33.78	0	839705..840820	-	371	21282474	int	MW0745	-	hypothetical protein
746	 22.90	-2	840826..841563	-	245	21282475	-	MW0746	-	hypothetical protein
747	 30.14	0	841715..841933	+	72	21282476	-	MW0747	-	hypothetical protein
748	 26.53	-1	841945..842091	+	48	21282477	-	MW0748	-	hypothetical protein
749	 30.22	0	842084..842308	+	74	21282478	-	MW0749	-	hypothetical protein
750	 30.67	0	842309..842608	+	99	21282479	-	MW0750	-	hypothetical protein
751	 30.55	0	842700..845072	+	790	21282480	-	MW0751	-	putative primase
752	 31.59	0	845745..846089	+	114	21282481	-	MW0752	-	hypothetical protein
753	 26.57	-1	846314..846520	+	68	21282482	-	MW0753	-	hypothetical protein
754	 31.63	0	846507..847565	+	352	21282483	-	MW0754	-	hypothetical protein
755	 29.67	0	847747..848238	+	163	21282484	-	MW0755	-	hypothetical protein
756	 22.90	-2	848599..849576	+	325	21282485	-	MW0756	-	hypothetical protein
757	 19.79	-2	849592..850152	+	186	21282486	-	MW0757	-	hypothetical protein
758	 29.55	0	850452..851006	-	184	21282487	ear	MW0758	-	Ear
759	 29.59	0	851795..852595	+	266	21282488	sec4	MW0759	-	enterotoxin type C precursor
760	 28.22	-1	852762..853484	-	240	21282489	sel2	MW0760	-	extracellular enterotoxin L
761	 27.30	-1	854223..854951	-	242	21282490	-	MW0761	-	hypothetical protein
762	 27.78	-1	855549..856070	+	173	21282491	-	MW0762	-	hypothetical protein
763	 34.27	0	856209..856739	+	176	21282492	-	MW0763	-	hypothetical protein
764	 39.28	+1	857002..859842	+	946	21282493	clfA	MW0764	-	fibrinogen-binding protein
765	 28.30	-1	860063..860539	+	158	21282494	-	MW0765	-	truncated secreted von Willebrand factor-binding protein VWbp
766	 30.33	0	860591..861589	+	332	21282495	-	MW0766	-	truncated secreted von Willebrand factor-binding protein VWbp
767	 31.67	0	861940..862962	+	340	21282496	ssp	MW0767	-	extracellular ECM and plasma binding protein
768	 29.69	0	863297..863818	+	173	21282497	-	MW0768	-	hypothetical protein
769	 34.50	0	864159..864845	+	228	21282498	-	MW0769	-	staphylococcal nuclease
770	 39.80	+2	865202..865402	+	66	21282499	cspC	MW0770	-	cold-shock protein C
771	 31.05	0	865898..866116	-	72	21282500	-	MW0771	-	hypothetical protein
772	 27.72	-1	866178..866462	-	94	21282501	-	MW0772	-	hypothetical protein
773	 31.05	0	866550..867119	-	189	21282502	-	MW0773	-	hypothetical protein
774	 28.57	-1	867307..867495	-	62	21282503	-	MW0774	-	hypothetical protein
775	 24.90	-2	867524..867784	-	86	21282504	-	MW0775	-	hypothetical protein
776	 31.86	0	868124..868327	+	67	21282505	-	MW0776	-	hypothetical protein
777	 27.00	-1	868324..868560	-	78	21282506	-	MW0777	-	hypothetical protein
778	 34.71	0	868784..869365	+	193	21282507	-	MW0778	-	hypothetical protein
779	 30.91	0	869438..870055	-	205	21282508	-	MW0779	-	hypothetical protein
780	 29.49	0	870210..870704	-	164	21282509	-	MW0780	-	hypothetical protein
781	 35.70	0	871103..871525	-	140	21282510	-	MW0781	-	hypothetical protein
782	 32.50	0	871673..872389	+	238	21282511	-	MW0782	-	3-dehydroquinate dehydratase
783	 32.59	0	872472..873011	+	179	21282512	-	MW0783	-	hypothetical protein
784	 34.58	0	873161..873481	-	106	21282513	-	MW0784	-	hypothetical protein
785	 29.97	0	873625..873981	+	118	21282514	-	MW0785	-	hypothetical protein
786	 33.60	0	874139..874519	+	126	21282515	-	MW0786	-	glycine cleavage system protein H
787	 32.99	0	874698..875576	+	292	21282516	-	MW0787	-	hypothetical protein
788	 30.49	0	876317..876703	+	128	21282517	-	MW0788	-	hypothetical protein
789	 27.61	-1	876696..876992	+	98	21282518	-	MW0789	-	hypothetical protein
790	 34.80	0	877242..878267	+	341	21282519	-	MW0790	-	hypothetical protein
791	 34.91	0	878260..878955	+	231	21282520	-	MW0791	-	hypothetical protein
792	 29.93	0	878973..879794	+	273	21282521	-	MW0792	-	hypothetical protein
793	 29.74	0	880148..880342	+	64	21282522	-	MW0793	-	hypothetical protein
794	 33.10	0	880575..881426	-	283	21282523	-	MW0794	-	hypothetical protein
795	 33.86	0	881754..882515	+	253	21282524	-	MW0795	-	hypothetical protein
796	 34.17	0	882613..883920	+	435	21282525	-	MW0796	-	hypothetical protein
797	 37.28	+1	884035..885276	+	413	21282526	-	MW0797	-	hypothetical protein
798	 36.13	0	885266..885730	+	154	21282527	-	MW0798	-	hypothetical protein
799	 34.41	0	885881..887278	+	465	21282528	-	MW0799	-	hypothetical protein
800	 29.71	0	887465..887602	+	45	21282529	-	MW0800	-	hypothetical protein
801	 26.67	-1	887608..887922	-	104	21282530	-	MW0801	-	hypothetical protein
802	 32.47	0	888287..889327	+	346	21282531	-	MW0802	-	hypothetical protein
803	 37.64	+1	889341..890408	+	355	21282532	-	MW0803	-	hypothetical protein
804	 33.45	0	890584..891432	+	282	21282533	-	MW0804	-	hypothetical protein
805	 32.25	0	891445..892272	+	275	21282534	-	MW0805	-	hypothetical protein
806	 33.41	0	892299..893618	+	439	21282535	-	MW0806	-	hypothetical protein
807	 36.27	+1	893702..894619	+	305	21282536	lipA	MW0807	-	lipoyl synthase
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.