IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
662	 37.98	+1	743648..745606	+	652	21282391	fruA	MW0662	-	fructose specific permease
663	 35.96	0	745914..747095	+	393	21282392	nagA	MW0663	-	N-acetylglucosamine-6-phosphate deacetylase
664	 32.37	0	747316..748665	+	449	21282393	-	MW0664	-	hypothetical protein
665	 31.55	0	748887..749726	+	279	21282394	-	MW0665	-	hypothetical protein
666	 31.30	0	749858..750841	+	327	21282395	-	MW0666	-	hypothetical protein
667	 30.49	0	750913..751968	-	351	21282396	saeS	MW0667	-	histidine protein kinase
668	 32.75	0	751968..752654	-	228	21282397	saeR	MW0668	-	response regulator
669	 29.51	0	752629..752811	-	60	21282398	-	MW0669	-	hypothetical protein
670	 31.29	0	753445..753885	-	146	21282399	-	MW0670	-	hypothetical protein
671	 25.64	-2	754165..754749	-	194	21282400	-	MW0671	-	hypothetical protein
672	 35.99	0	754848..755561	-	237	21282401	-	MW0672	-	hypothetical protein
673	 32.86	0	755565..755984	-	139	21282402	-	MW0673	-	hypothetical protein
674	 34.53	0	755986..756654	-	222	21282403	-	MW0674	-	hypothetical protein
675	 33.84	0	757005..757598	+	197	21282404	-	MW0675	-	hypothetical protein
676	 32.47	0	757582..758733	+	383	21282405	-	MW0676	-	hypothetical protein
677	 31.20	0	758733..759341	+	202	21282406	-	MW0677	-	hypothetical protein
678	 30.92	0	759407..759613	+	68	21282407	-	MW0678	-	hypothetical protein
679	 29.96	0	759701..760411	+	236	21282408	-	MW0679	-	hypothetical protein
680	 34.43	0	760395..761399	+	334	21282409	-	MW0680	-	hypothetical protein
681	 31.27	0	761873..763813	+	646	21282410	-	MW0681	-	hypothetical protein
682	 33.12	0	764090..765967	+	625	21282411	-	MW0682	-	hypothetical protein
683	 31.93	0	765979..767760	+	593	21282412	recQ	MW0683	-	DNA helicase
684	 33.64	0	767982..768959	+	325	21282413	-	MW0684	-	hypothetical protein
685	 31.55	0	768952..770466	+	504	21282414	-	MW0685	-	hypothetical protein
686	 33.52	0	770706..771764	+	352	21282415	-	MW0686	-	hypothetical protein
687	 32.23	0	772059..772601	+	180	21282416	-	MW0687	-	hypothetical protein
688	 31.81	0	773282..774199	-	305	21282417	-	MW0688	-	hypothetical protein
689	 34.20	0	774468..775973	-	501	21282418	-	MW0689	-	hypothetical protein
690	 31.54	0	776314..776814	-	166	21282419	-	MW0690	-	7-cyano-7-deazaguanine reductase
691	 33.22	0	776834..777700	-	288	21282420	-	MW0691	-	hypothetical protein
692	 34.09	0	778501..778899	+	132	21282421	nrdI	MW0692	-	ribonucleotide reductase stimulatory protein
693	 32.86	0	778862..780967	+	701	21282422	nrdE	MW0693	-	ribonucleotide-diphosphate reductase subunit alpha
694	 32.61	0	781085..782056	+	323	21282423	nrdF	MW0694	-	ribonucleotide-diphosphate reductase subunit beta
695	 32.30	0	782764..783735	+	323	21282424	-	MW0695	-	hypothetical protein
696	 29.47	0	783722..784678	+	318	21282425	-	MW0696	-	hypothetical protein
697	 30.31	0	784675..785436	+	253	21282426	-	MW0697	-	hypothetical protein
698	 29.54	0	785555..786583	+	342	21282427	-	MW0698	-	hypothetical protein
699	 32.38	0	786900..787214	-	104	21282428	-	MW0699	-	hypothetical protein
700	 35.50	0	787232..788155	-	307	21282429	-	MW0700	-	hypothetical protein
701	 28.32	-1	788282..788800	-	172	21282430	-	MW0701	-	hypothetical protein
702	 27.42	-1	788920..789798	+	292	21282431	-	MW0702	-	hypothetical protein
703	 32.40	0	789952..790272	+	106	21282432	-	MW0703	-	hypothetical protein
704	 34.67	0	790697..791821	+	374	21282433	-	MW0704	-	hypothetical protein
705	 35.29	0	792003..793229	-	408	21282434	pepT	MW0705	-	peptidase T
706	 33.54	0	793243..793737	-	164	21282435	-	MW0706	-	hypothetical protein
707	 35.56	0	793755..794516	-	253	21282436	-	MW0707	-	hypothetical protein
708	 30.63	0	794712..795782	-	356	21282437	-	MW0708	-	hypothetical protein
709	 31.63	0	796100..797155	+	351	21282438	llm	MW0709	-	lipophilic protein affecting lysis rate and methicillin resistance level protein
710	 34.11	0	797327..797968	-	213	21282439	-	MW0710	-	hypothetical protein
711	 34.26	0	798112..798978	+	288	21282440	-	MW0711	-	hypothetical protein
712	 31.84	0	799486..800424	+	312	21282441	-	MW0712	-	hypothetical protein
713	 30.96	0	800417..801091	+	224	21282442	-	MW0713	-	hypothetical protein
714	 33.16	0	801152..801724	+	190	21282443	-	MW0714	-	hypothetical protein
715	 34.99	0	802138..804669	+	843	21282444	secA	MW0715	-	preprotein translocase subunit SecA
716	 37.21	+1	805219..806094	+	291	21282445	prfB	MW0716	-	peptide chain release factor 2
717	 35.71	0	806503..807342	+	279	21282446	-	MW0717	-	hypothetical protein
718	 28.42	-1	807516..808166	+	216	21282447	-	MW0718	-	hypothetical protein
719	 30.38	0	808163..808399	+	78	21282448	-	MW0719	-	hypothetical protein
720	 35.09	0	808662..810653	+	663	21282449	uvrB	MW0720	-	excinuclease ABC subunit B
721	 35.41	0	810661..813507	+	948	21282450	uvrA	MW0721	-	exinuclease ABC subunit A
722	 35.58	0	814114..815046	+	310	21282451	hprK	MW0722	-	HPr kinase/phosphorylase
723	 32.50	0	815052..815891	+	279	21282452	lgt	MW0723	-	prolipoprotein diacylglyceryl transferase
724	 31.48	0	815899..816384	+	161	21282453	-	MW0724	-	hypothetical protein
725	 29.65	0	816392..817831	+	479	21282454	-	MW0725	-	hypothetical protein
726	 37.29	+1	817898..818833	+	311	21282455	trxB	MW0726	-	thioredoxine reductase
727	 31.47	0	819598..820509	+	303	21282456	-	MW0727	-	hypothetical protein
728	 33.43	0	820506..821501	+	331	21282457	-	MW0728	-	hypothetical protein
729	 32.70	0	821612..822556	+	314	21282458	-	MW0729	-	hypothetical protein
730	 34.35	0	823129..823716	+	195	21282459	clpP	MW0730	-	hypothetical protein
731	 33.78	0	823959..824861	-	300	21282460	-	MW0731	-	hypothetical protein
732	 35.40	0	825564..826193	+	209	21282461	-	MW0732	-	hypothetical protein
733	 37.48	+1	826835..827848	+	337	21282462	gapR	MW0733	-	glycolytic operon regulator
734	 37.98	+1	827901..828911	+	336	21282463	gap	MW0734	-	glyceraldehyde-3-phosphate dehydrogenase
735	 34.68	0	829050..830240	+	396	21282464	pgk	MW0735	-	phosphoglycerate kinase
736	 36.88	+1	830362..831123	+	253	21282465	tpi	MW0736	-	triosephosphate isomerase
737	 36.63	+1	831126..832643	+	505	21282466	pgm	MW0737	-	phosphoglyceromutase
738	 36.93	+1	832773..834077	+	434	21282467	eno	MW0738	-	enolase (2-phosphoglycerate dehydrogenase)
739	 31.81	0	834416..834874	+	152	21282468	-	MW0739	-	hypothetical protein
740	 30.34	0	834941..835174	+	77	21282469	secG	MW0740	-	preprotein translocase subunit SecG
741	 33.33	0	835290..836030	+	246	21282470	-	MW0741	-	hypothetical protein
742	 34.22	0	836064..838436	+	790	21282471	rnr	MW0742	-	ribonuclease R
743	 36.13	0	838458..838922	+	154	21282472	smpB	MW0743	-	SsrA-binding protein
744	 21.30	-2	839478..839693	-	71	21282473	-	MW0744	-	hypothetical protein
745	 33.78	0	839705..840820	-	371	21282474	int	MW0745	-	hypothetical protein
746	 22.90	-2	840826..841563	-	245	21282475	-	MW0746	-	hypothetical protein
747	 30.14	0	841715..841933	+	72	21282476	-	MW0747	-	hypothetical protein
748	 26.53	-1	841945..842091	+	48	21282477	-	MW0748	-	hypothetical protein
749	 30.22	0	842084..842308	+	74	21282478	-	MW0749	-	hypothetical protein
750	 30.67	0	842309..842608	+	99	21282479	-	MW0750	-	hypothetical protein
751	 30.55	0	842700..845072	+	790	21282480	-	MW0751	-	putative primase
752	 31.59	0	845745..846089	+	114	21282481	-	MW0752	-	hypothetical protein
753	 26.57	-1	846314..846520	+	68	21282482	-	MW0753	-	hypothetical protein
754	 31.63	0	846507..847565	+	352	21282483	-	MW0754	-	hypothetical protein
755	 29.67	0	847747..848238	+	163	21282484	-	MW0755	-	hypothetical protein
756	 22.90	-2	848599..849576	+	325	21282485	-	MW0756	-	hypothetical protein
757	 19.79	-2	849592..850152	+	186	21282486	-	MW0757	-	hypothetical protein
758	 29.55	0	850452..851006	-	184	21282487	ear	MW0758	-	Ear
759	 29.59	0	851795..852595	+	266	21282488	sec4	MW0759	-	enterotoxin type C precursor
760	 28.22	-1	852762..853484	-	240	21282489	sel2	MW0760	-	extracellular enterotoxin L
761	 27.30	-1	854223..854951	-	242	21282490	-	MW0761	-	hypothetical protein
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.