IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
486	 32.10	0	563109..563513	+	134	21282215	-	MW0486	-	hypothetical protein
487	 35.48	0	563521..564267	+	248	21282216	-	MW0487	-	hypothetical protein
488	 32.57	0	564267..564791	+	174	21282217	-	MW0488	-	hypothetical protein
489	 27.89	-1	564872..565441	+	189	21282218	-	MW0489	-	hypothetical protein
490	 28.96	-1	565755..565937	+	60	21282219	secE	MW0490	-	preprotein translocase subunit SecE
491	 35.34	0	565950..566498	+	182	21282220	nusG	MW0491	-	transcription antitermination protein
492	 38.77	+1	566679..567101	+	140	21282221	rplK	MW0492	-	50S ribosomal protein L11
493	 36.36	+1	567309..568001	+	230	21282222	rplA	MW0493	-	50S ribosomal protein L1
494	 37.33	+1	568273..568773	+	166	21282223	rplJ	MW0494	-	50S ribosomal protein L10
495	 35.77	0	568816..569184	+	122	21282224	rplL	MW0495	-	50S ribosomal protein L7/L12
496	 33.83	0	569359..569967	+	202	21282225	-	MW0496	-	hypothetical protein
497	 37.64	+1	570182..573733	+	1183	21282226	rpoB	MW0497	-	DNA-directed RNA polymerase subunit beta
498	 36.20	0	573870..577493	+	1207	21282227	rpoC	MW0498	-	DNA-directed RNA polymerase subunit beta'
499	 32.16	0	577630..577884	+	84	21282228	-	MW0499	-	putative ribosomal protein L7Ae-like
500	 37.68	+1	577982..578395	+	137	21282229	rpsL	MW0500	-	30S ribosomal protein S12
501	 38.43	+1	578461..578931	+	156	21282230	rpsG	MW0501	-	30S ribosomal protein S7
502	 39.15	+1	579054..581135	+	693	21282231	fus	MW0502	-	elongation factor G
503	 40.68	+2	581352..582536	+	394	21282232	tuf	MW0503	-	elongation factor Tu
504	 35.03	0	582818..583993	-	391	21282233	-	MW0504	-	hypothetical protein
505	 33.92	0	584164..585351	+	395	21282234	-	MW0505	-	2-amino-3-ketobutyrate coenzyme A ligase
506	 34.02	0	585618..586496	+	292	21282235	-	MW0506	-	chaperone protein HchA
507	 32.66	0	586655..588292	+	545	21282236	araB	MW0507	-	ribulokinase
508	 35.40	0	588506..589471	+	321	21282237	-	MW0508	-	hypothetical protein
509	 34.91	0	589806..590882	+	358	21282238	ilvE	MW0509	-	branched-chain amino acid aminotransferase
510	 34.94	0	591133..591816	+	227	21282239	-	MW0510	-	hypothetical protein
511	 32.28	0	591932..592594	-	220	21282240	-	MW0511	-	hypothetical protein
512	 26.54	-1	592587..593204	-	205	21282241	-	MW0512	-	hypothetical protein
513	 36.31	+1	593271..593741	+	156	21282242	-	MW0513	-	hypothetical protein
514	 33.79	0	593888..594757	+	289	21282243	-	MW0514	-	hypothetical protein
515	 30.86	0	594778..595344	+	188	21282244	-	MW0515	-	hypothetical protein
516	 35.25	0	595775..598642	+	955	21282245	sdrC	MW0516	-	Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein
517	 33.78	0	599009..603052	+	1347	21282246	sdrD	MW0517	-	Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein
518	 34.73	0	603446..606871	+	1141	21282247	sdrE	MW0518	-	Ser-Asp rich fibrinogen-binding bone sialoprotein-binding protein
519	 30.55	0	606990..608462	+	490	21282248	-	MW0519	-	hypothetical protein
520	 30.58	0	608586..610076	-	496	21282249	-	MW0520	-	hypothetical protein
521	 34.81	0	610358..611236	-	292	21282250	-	MW0521	-	putative GTP cyclohydrolase
522	 36.04	0	611249..611914	-	221	21282251	-	MW0522	-	hypothetical protein
523	 35.00	0	611928..612287	-	119	21282252	-	MW0523	-	hypothetical protein
524	 33.99	0	612566..613324	+	252	21282253	nagB	MW0524	-	glucosamine-6-phosphate isomerase
525	 34.91	0	613401..614033	+	210	21282254	-	MW0525	-	hypothetical protein
526	 36.79	+1	614035..614583	+	182	21282255	-	MW0526	-	hypothetical protein
527	 34.57	0	614696..615343	+	215	21282256	-	MW0527	-	hypothetical protein
528	 34.33	0	615845..617245	+	466	21282257	proP	MW0528	-	hypothetical protein
529	 26.67	-1	617580..617789	+	69	21282258	-	MW0529	-	hypothetical protein
530	 32.46	0	617789..619165	+	458	21282259	vraA	MW0530	-	hypothetical protein
531	 38.25	+1	619167..620306	+	379	21282260	vraB	MW0531	-	acetyl-CoA c-acetyltransferase
532	 31.97	0	620281..620646	+	121	21282261	vraC	MW0532	-	hypothetical protein
533	 29.63	0	620649..620918	+	89	21282262	-	MW0533	-	hypothetical protein
534	 29.76	0	621119..621286	-	55	21282263	-	MW0534	-	hypothetical protein
535	 38.27	+1	621793..622623	-	276	21282264	-	MW0535	-	phosphomethylpyrimidine kinase
536	 35.46	0	622807..623463	+	218	21282265	ung	MW0536	-	uracil-DNA glycosylase
537	 35.43	0	623464..623844	+	126	21282266	-	MW0537	-	hypothetical protein
538	 33.60	0	623977..624345	+	122	21282267	-	MW0538	-	hypothetical protein
539	 35.56	0	624466..625950	+	494	21282268	-	MW0539	-	hypothetical protein
540	 33.55	0	626091..626543	-	150	21282269	-	MW0540	-	hypothetical protein
541	 36.10	0	626556..627206	-	216	21282270	-	MW0541	-	hypothetical protein
542	 33.33	0	627869..628621	-	250	21282271	-	MW0542	-	putative heme peroxidase
543	 36.68	+1	628789..629775	+	328	21282272	eutD	MW0543	-	phosphotransacetylase
544	 33.59	0	629850..630614	+	254	21282273	-	MW0544	-	hypothetical protein
545	 38.11	+1	631201..632121	+	306	21282274	mvaK1	MW0545	-	mevalonate kinase
546	 36.99	+1	632126..633109	+	327	21282275	mvaD	MW0546	-	mevalonate diphosphate decarboxylase
547	 33.43	0	633122..634198	+	358	21282276	mvaK2	MW0547	-	phosphomevalonate kinase
548	 35.38	0	634375..634716	+	113	21282277	-	MW0548	-	hypothetical protein
549	 34.77	0	634768..636090	-	440	21282278	-	MW0549	-	hypothetical protein
550	 32.43	0	636077..636517	-	146	21282279	-	MW0550	-	hypothetical protein
551	 33.97	0	637142..638551	+	469	21282280	-	MW0551	-	hypothetical protein
552	 24.40	-2	638555..639181	+	208	21282281	-	MW0552	-	hypothetical protein
553	 24.01	-2	639317..639949	+	210	21282282	-	MW0553	-	hypothetical protein
554	 28.64	-1	640037..640654	+	205	21282283	-	MW0554	-	hypothetical protein
555	 26.67	-1	640729..641358	+	209	21282284	-	MW0555	-	hypothetical protein
556	 24.64	-2	641554..642174	+	206	21282285	-	MW0556	-	hypothetical protein
557	 25.39	-2	642305..642946	+	213	21282286	-	MW0557	-	hypothetical protein
558	 26.35	-1	642993..643622	+	209	21282287	-	MW0558	-	hypothetical protein
559	 26.98	-1	644075..644704	+	209	21282288	-	MW0559	-	hypothetical protein
560	 23.83	-2	644828..645469	+	213	21282289	-	MW0560	-	hypothetical protein
561	 26.42	-1	645578..646141	+	187	21282290	-	MW0561	-	hypothetical protein
562	 25.36	-2	646376..647002	+	208	21282291	-	MW0562	-	hypothetical protein
563	 34.61	0	647272..648210	+	312	21282292	-	MW0563	-	hypothetical protein
564	 35.38	0	648421..648957	+	178	21282293	-	MW0564	-	hypothetical protein
565	 31.66	0	649126..649602	+	158	21282294	-	MW0565	-	hypothetical protein
566	 33.26	0	649642..650937	+	431	21282295	-	MW0566	-	hypothetical protein
567	 32.94	0	650980..651486	+	168	21282296	-	MW0567	-	hypothetical protein
568	 36.40	+1	651985..652995	+	336	21282297	adh1	MW0568	-	alcohol dehydrogenase
569	 26.85	-1	653072..653179	+	35	21282298	-	MW0569	-	hypothetical protein
570	 32.13	0	653272..653688	+	138	21282299	-	MW0570	-	hypothetical protein
571	 33.03	0	653685..655346	+	553	21282300	argS	MW0571	-	arginyl-tRNA synthetase
572	 27.83	-1	655737..656372	+	211	21282301	-	MW0572	-	hypothetical protein
573	 31.87	0	656683..657570	+	295	21282302	-	MW0573	-	hypothetical protein
574	 31.44	0	657719..658669	+	316	21282303	-	MW0574	-	hypothetical protein
575	 30.56	0	658724..659443	+	239	21282304	-	MW0575	-	hypothetical protein
576	 31.96	0	659427..660227	+	266	21282305	-	MW0576	-	hypothetical protein
577	 30.97	0	660363..660869	+	168	21282306	-	MW0577	-	hypothetical protein
578	 26.36	-1	661031..661747	+	238	21282307	-	MW0578	-	hypothetical protein
579	 29.91	0	661916..662704	+	262	21282308	-	MW0579	-	hypothetical protein
580	 27.47	-1	662954..663328	-	124	21282309	sarA	MW0580	-	staphylococcal accessory regulator A
581	 30.76	0	664276..665169	-	297	21282310	-	MW0581	-	hypothetical protein
582	 29.78	0	665400..665624	-	74	21282311	-	MW0582	-	hypothetical protein
583	 31.86	0	665641..665844	-	67	21282312	-	MW0583	-	hypothetical protein
584	 30.12	0	666003..666563	+	186	21282313	-	MW0584	-	hypothetical protein
585	 32.00	0	666582..668984	+	800	21282314	-	MW0585	-	putative monovalent cation/H+ antiporter subunit A
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.