IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
328	 32.70	0	376168..376797	+	209	21282057	-	MW0328	-	hypothetical protein
329	 31.75	0	377187..378320	-	377	21282058	-	MW0329	-	hypothetical protein
330	 38.58	+1	378859..380040	+	393	21282059	-	MW0330	-	hypothetical protein
331	 37.18	+1	380123..380875	-	250	21282060	-	MW0331	-	hypothetical protein
332	 34.37	0	380918..383146	-	742	21282061	metE	MW0332	-	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
333	 36.26	+1	383143..384984	-	613	21282062	-	MW0333	-	bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
334	 37.98	+1	384953..386113	-	386	21282063	-	MW0334	-	hypothetical protein
335	 35.87	0	386110..387213	-	367	21282064	-	MW0335	-	hypothetical protein
336	 33.57	0	387886..388722	+	278	21282065	-	MW0336	-	hypothetical protein
337	 30.61	0	388879..389760	+	293	21282066	-	MW0337	-	hypothetical protein
338	 29.41	-1	389790..389993	+	67	21282067	-	MW0338	-	hypothetical protein
339	 35.25	0	390005..391102	+	365	21282068	-	MW0339	-	translation-associated GTPase
340	 31.77	0	391188..391379	-	63	21282069	-	MW0340	-	hypothetical protein
341	 38.38	+1	391623..391919	+	98	21282070	rpsF	MW0341	-	30S ribosomal protein S6
342	 38.10	+1	391940..392443	+	167	21282071	ssb	MW0342	-	single-strand DNA-binding protein of phage phi Sa 2mw
343	 37.04	+1	392495..392737	+	80	21282072	rpsR	MW0343	-	30S ribosomal protein S18
344	 28.21	-1	393003..393977	-	324	21282073	-	MW0344	-	hypothetical protein
345	 30.07	0	394900..395511	+	203	21282074	-	MW0345	-	hypothetical protein
346	 31.59	0	395880..396281	+	133	21282075	-	MW0346	-	hypothetical protein
347	 31.06	0	396429..397001	+	190	21282076	-	MW0347	-	hypothetical protein
348	 29.17	-1	397139..397402	-	87	21282077	-	MW0348	-	hypothetical protein
349	 36.51	+1	397696..397947	+	83	21282078	-	MW0349	-	hypothetical protein
350	 27.62	-1	397986..398195	-	69	21282079	-	MW0350	-	hypothetical protein
351	 32.13	0	398373..398954	+	193	21282080	-	MW0351	-	hypothetical protein
352	 30.99	0	399020..399403	-	127	21282081	-	MW0352	-	hypothetical protein
353	 30.30	0	399491..399589	+	32	21282082	-	MW0353	-	hypothetical protein
354	 30.62	0	399658..400284	-	208	21282083	-	MW0354	-	hypothetical protein
355	 29.86	0	400357..401967	-	536	21282084	-	MW0355	-	hypothetical protein
356	 37.86	+1	402082..403605	-	507	21282085	ahpF	MW0356	-	alkyl hydroperoxide reductase subunit F
357	 37.19	+1	403621..404190	-	189	21282086	ahpC	MW0357	-	alkyl hydroperoxide reductase subunit C
358	 37.83	+1	404682..405437	+	251	21282087	-	MW0358	-	hypothetical protein
359	 39.31	+1	405518..406906	-	462	21282088	-	MW0359	-	hypothetical protein
360	 31.31	0	406991..407089	+	32	21282089	-	MW0360	-	hypothetical protein
361	 37.51	+1	408080..409036	-	318	21282090	-	MW0361	-	hypothetical protein
362	 30.02	0	409154..409816	-	220	21282091	-	MW0362	-	hypothetical protein
363	 32.84	0	409959..410366	-	135	21282092	-	MW0363	-	hypothetical protein
364	 35.75	0	410879..411457	+	192	21282093	xprT	MW0364	-	xanthine phosphoribosyltransferase
365	 35.62	0	411457..412725	+	422	21282094	pbuX	MW0365	-	xanthine permease
366	 37.83	+1	412763..414229	+	488	21282095	guaB	MW0366	-	inositol-monophosphate dehydrogenase
367	 37.22	+1	414254..415795	+	513	21282096	guaA	MW0367	-	bifunctional GMP synthase/glutamine amidotransferase protein
368	 24.57	-2	416307..417413	+	368	21282097	-	MW0368	-	hypothetical protein
369	 36.72	+1	417866..418042	+	58	21282098	-	MW0369	-	hypothetical protein
370	 26.97	-1	418039..418431	-	130	21282099	-	MW0370	-	hypothetical protein
371	 35.21	0	418453..418932	-	159	21282100	-	MW0372	-	hypothetical protein
372	 29.41	-1	418835..418987	+	50	21282101	-	MW0371	-	hypothetical protein
373	 42.64	+2	419858..420190	+	110	21282102	-	MW0373	-	hypothetical protein
374	 26.98	-1	421295..423121	+	608	21282103	-	MW0374	-	hypothetical protein
375	 25.53	-2	423659..424081	-	140	21282104	-	MW0375	-	hypothetical protein
376	 26.14	-1	424935..425087	-	50	21282105	-	MW0376	-	hypothetical protein
377	 28.92	-1	425450..425857	+	135	21282106	-	MW0377	-	hypothetical protein
378	 32.09	0	425904..426386	+	160	21282107	-	MW0378	-	hypothetical protein
379	 28.55	-1	426586..427275	+	229	21282108	-	MW0379	-	hypothetical protein
380	 32.22	0	427534..427893	-	119	21282109	-	MW0380	-	hypothetical protein
381	 35.46	0	427912..428757	-	281	21282110	-	MW0381	-	hypothetical protein
382	 29.81	0	429229..429909	+	226	21282111	set16	MW0382	-	superantigen-like protein
383	 29.45	0	430195..430890	+	231	21282112	set17	MW0383	-	superantigen-like protein
384	 34.45	0	431181..432251	+	356	21282113	set18	MW0384	-	superantigen-like protein
385	 33.97	0	432616..433563	+	315	21282114	set19	MW0385	-	superantigen-like protein
386	 31.91	0	433927..434631	+	234	21282115	set20	MW0386	-	superantigen-like protein 5
387	 29.47	0	435077..435775	+	232	21282116	set21	MW0387	-	superantigen-like protein
388	 30.32	0	436197..436892	+	231	21282117	set22	MW0388	-	superantigen-like protein 7
389	 28.47	-1	437231..437929	+	232	21282118	set23	MW0389	-	superantigen-like protein
390	 28.90	-1	438308..439006	+	232	21282119	set24	MW0390	-	superantigen-like protein
391	 29.53	0	439365..440048	+	227	21282120	set25	MW0391	-	superantigen-like protein
392	 37.89	+1	440310..441866	+	518	21282121	hsdM	MW0392	-	type I site-specific deoxyribonuclease LldI chain hsdM
393	 28.65	-1	441859..443118	+	419	21282122	hsdS	MW0393	-	specificity determinant HsdS
394	 30.16	0	443524..444216	+	230	21282123	set26	MW0394	-	superantigen-like protein
395	 32.27	0	444238..445740	+	500	21282124	-	MW0395	-	hypothetical protein
396	 33.33	0	445847..446155	-	102	21282125	-	MW0396	-	hypothetical protein
397	 27.80	-1	446491..447303	+	270	21282126	lpl10	MW0397	-	hypothetical protein
398	 29.83	0	447351..448121	+	256	21282127	lpl11	MW0398	-	hypothetical protein
399	 30.68	0	448153..448944	+	263	21282128	lpl12	MW0399	-	hypothetical protein
400	 29.95	0	448996..449793	+	265	21282129	lpl13	MW0400	-	hypothetical protein
401	 29.27	-1	450050..450787	+	245	21282130	lpl14	MW0401	-	hypothetical protein
402	 30.02	0	450777..452102	+	441	21282131	-	MW0402	-	hypothetical protein
403	 26.85	-1	452099..452422	+	107	21282132	-	MW0403	-	hypothetical protein
404	 33.02	0	452441..452755	+	104	21282133	-	MW0404	-	hypothetical protein
405	 30.26	0	453039..453233	-	64	21282134	-	MW0405	-	hypothetical protein
406	 37.16	+1	453431..454633	+	400	21282135	-	MW0406	-	hypothetical protein
407	 37.24	+1	456218..457702	+	494	21282136	ndhF	MW0407	-	NADH dehydrogenase subunit 5
408	 38.69	+1	457715..460420	+	901	21282137	-	MW0408	-	hypothetical protein
409	 33.61	0	460582..460944	+	120	21282138	-	MW0409	-	hypothetical protein
410	 34.22	0	461627..462301	+	224	21282139	-	MW0410	-	hypothetical protein
411	 34.15	0	462338..463072	+	244	21282140	-	MW0411	-	hypothetical protein
412	 44.74	+2	463250..463363	+	37	21282141	-	MW0412	-	hypothetical protein
413	 34.82	0	463525..464865	+	446	21282142	-	MW0413	-	hypothetical protein
414	 38.85	+1	465082..465987	+	301	21282143	cysM	MW0414	-	hypothetical protein
415	 35.96	0	465980..467122	+	380	21282144	metB	MW0415	-	cystathionine gamma-synthase
416	 34.99	0	467419..468444	+	341	21282145	-	MW0416	-	hypothetical protein
417	 36.52	+1	468448..469107	+	219	21282146	-	MW0417	-	hypothetical protein
418	 33.33	0	469144..469986	+	280	21282147	-	MW0418	-	hypothetical protein
419	 36.52	+1	470318..471322	+	334	21282148	-	MW0419	-	hypothetical protein
420	 32.59	0	471507..471776	-	89	21282149	-	MW0420	-	hypothetical protein
421	 34.09	0	471925..472320	+	131	21282150	-	MW0421	-	hypothetical protein
422	 36.01	0	472310..472795	+	161	21282151	-	MW0422	-	hypothetical protein
423	 32.82	0	472964..473746	-	260	21282152	-	MW0423	-	hypothetical protein
424	 33.51	0	473743..474855	-	370	21282153	-	MW0424	-	hypothetical protein
425	 33.22	0	474976..475860	-	294	21282154	gltC	MW0425	-	transcription activator of glutamate synthase operon
426	 37.71	+1	476042..480541	+	1499	21282155	gltB	MW0426	-	glutamate synthase large subunit
427	 38.32	+1	480559..482022	+	487	21282156	gltD	MW0427	-	glutamate synthase subunit beta
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.