IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2362	 34.96	0	2511502..2512911	+	469	21284091	-	MW2362	-	hypothetical protein
2363	 32.42	0	2513049..2515127	+	692	21284092	-	MW2363	-	hypothetical protein
2364	 34.21	0	2515267..2517096	-	609	21284093	-	MW2364	-	hypothetical protein
2365	 31.80	0	2517328..2518824	+	498	21284094	-	MW2365	-	hypothetical protein
2366	 35.80	0	2518916..2519767	-	283	21284095	-	MW2366	-	hypothetical protein
2367	 35.68	0	2520089..2521024	-	311	21284096	-	MW2367	-	2-dehydropantoate 2-reductase
2368	 34.40	0	2521250..2522650	-	466	21284097	-	MW2368	-	hypothetical protein
2369	 35.63	0	2522944..2523639	-	231	21284098	opuCD	MW2369	-	glycine betaine/carnitine/choline ABC transporter opuCD
2370	 35.46	0	2523639..2524580	-	313	21284099	opuCC	MW2370	-	glycine betaine/carnitine/choline ABC transporter opuCC (osmoprotec)
2371	 35.69	0	2524597..2525232	-	211	21284100	opuCB	MW2371	-	glycine betaine/carnitine/choline ABC transporter opuCB
2372	 36.25	0	2525229..2526461	-	410	21284101	opuCA	MW2372	-	glycine betaine/carnitine/choline ABC transporter opuCA
2373	 32.00	0	2527125..2527724	-	199	21284102	-	MW2373	-	hypothetical protein
2374	 36.32	+1	2527904..2529541	+	545	21284103	-	MW2374	-	hypothetical protein
2375	 34.89	0	2529848..2531200	+	450	21284104	-	MW2375	-	hypothetical protein
2376	 35.19	0	2531262..2532449	-	395	21284105	-	MW2376	-	hypothetical protein
2377	 35.26	0	2532845..2533621	-	258	21284106	-	MW2377	-	hypothetical protein
2378	 34.54	0	2533614..2534276	-	220	21284107	-	MW2378	-	hypothetical protein
2379	 37.70	+1	2534524..2535600	-	358	21284108	-	MW2379	-	hypothetical protein
2380	 28.09	-1	2535956..2536222	-	88	21284109	-	MW2380	-	hypothetical protein
2381	 28.29	-1	2536222..2536479	-	85	21284110	-	MW2381	-	hypothetical protein
2382	 28.29	-1	2536838..2537293	+	151	21284111	-	MW2382	-	hypothetical protein
2383	 35.68	0	2537461..2539038	-	525	21284112	-	MW2383	-	hypothetical protein
2384	 30.27	0	2539234..2539983	+	249	21284113	-	MW2384	-	hypothetical protein
2385	 38.10	+1	2540132..2540257	-	41	21284114	-	MW2385	-	hypothetical protein
2386	 36.68	+1	2540345..2541538	-	397	21284115	-	MW2386	-	hypothetical protein
2387	 34.80	0	2541550..2542299	-	249	21284116	opp-1F	MW2387	-	oligopeptide transporter ATPase subunit
2388	 35.05	0	2542292..2543107	-	271	21284117	opp-1D	MW2388	-	oligopeptide transporter ATPase subunit
2389	 35.75	0	2543104..2543973	-	289	21284118	opp-1C	MW2389	-	oligopeptide transporter permease
2390	 33.76	0	2543970..2544905	-	311	21284119	opp-1B	MW2390	-	oligopeptide transporter permease
2391	 34.65	0	2544918..2546516	-	532	21284120	opp-1A	MW2391	-	oligopeptide transporter substrate binding protein
2392	 36.25	0	2546656..2547960	-	434	21284121	-	MW2392	-	hypothetical protein
2393	 33.82	0	2547953..2548771	-	272	21284122	-	MW2393	-	hypothetical protein
2394	 35.52	0	2548782..2549603	-	273	21284123	-	MW2394	-	hypothetical protein
2395	 25.07	-2	2550354..2550716	-	120	21284124	-	MW2395	-	hypothetical protein
2396	 40.29	+2	2550979..2551797	-	272	21284125	-	MW2396	-	short chain dehydrogenase
2397	 36.32	+1	2552032..2553570	+	512	21284126	-	MW2397	-	hypothetical protein
2398	 28.13	-1	2553682..2554104	-	140	21284127	-	MW2398	-	hypothetical protein
2399	 31.19	0	2554556..2554975	-	139	21284128	-	MW2399	-	hypothetical protein
2400	 29.52	0	2554993..2555412	-	139	21284129	-	MW2400	-	hypothetical protein
2401	 27.01	-1	2555439..2555849	-	136	21284130	-	MW2401	-	hypothetical protein
2402	 30.02	0	2556117..2556539	-	140	21284131	-	MW2402	-	hypothetical protein
2403	 37.07	+1	2556790..2557485	-	231	21284132	-	MW2403	-	hypothetical protein
2404	 32.98	0	2557774..2558055	+	93	21284133	-	MW2404	-	hypothetical protein
2405	 35.94	0	2558315..2558506	-	63	21284134	-	MW2405	-	hypothetical protein
2406	 29.90	0	2559046..2559861	-	271	21284135	-	MW2406	-	hypothetical protein
2407	 29.42	-1	2559975..2560766	-	263	21284136	-	MW2407	-	hypothetical protein
2408	 30.31	0	2560881..2561642	-	253	21284137	-	MW2408	-	hypothetical protein
2409	 27.91	-1	2561953..2564808	-	951	21284138	-	MW2409	-	hypothetical protein
2410	 31.55	0	2564810..2565202	-	130	21284139	-	MW2410	-	hypothetical protein
2411	 33.96	0	2565391..2567142	+	583	21284140	-	MW2411	-	hypothetical protein
2412	 31.46	0	2567426..2567692	+	88	21284141	-	MW2412	-	hypothetical protein
2413	 29.45	0	2567836..2568144	+	102	21284142	-	MW2413	-	hypothetical protein
2414	 22.22	-2	2568252..2568485	-	77	21284143	-	MW2414	-	hypothetical protein
2415	 30.82	0	2568466..2569659	-	397	21284144	-	MW2415	-	hypothetical protein
2416	 38.31	+1	2570042..2574157	-	1371	21284145	-	MW2416	-	hypothetical protein
2417	 22.78	-2	2574462..2574821	-	119	21284146	sarT	MW2417	-	hypothetical protein
2418	 24.87	-2	2575142..2575885	+	247	21284147	sarH2	MW2418	-	hypothetical protein
2419	 36.56	+1	2576097..2576963	-	288	21284148	gtaB	MW2419	-	UTP-glucose-1-phosphate uridyltransferase
2420	 35.95	0	2577143..2579974	-	943	21284149	fnbB	MW2420	-	hypothetical protein
2421	 37.07	+1	2580655..2583702	-	1015	21284150	fnb	MW2421	-	hypothetical protein
2422	 24.38	-2	2583837..2584037	-	66	21284151	-	MW2422	-	hypothetical protein
2423	 36.28	+1	2584171..2585529	-	452	21284152	gntP	MW2423	-	gluconate permease
2424	 37.64	+1	2585646..2587199	-	517	21284153	gntK	MW2424	-	gluconokinase
2425	 35.68	0	2587223..2587903	-	226	21284154	gntR	MW2425	-	gluconate operon transcriptional repressor
2426	 34.38	0	2588057..2588821	-	254	21284155	-	MW2426	-	hypothetical protein
2427	 32.61	0	2588986..2589678	-	230	21284156	-	MW2427	-	hypothetical protein
2428	 34.15	0	2589909..2590397	-	162	21284157	-	MW2428	-	hypothetical protein
2429	 32.73	0	2590464..2592287	-	607	21284158	-	MW2429	-	hypothetical protein
2430	 24.02	-2	2592799..2593002	-	67	21284159	-	MW2430	-	hypothetical protein
2431	 36.23	0	2593196..2594473	-	425	21284160	-	MW2431	-	hypothetical protein
2432	 32.68	0	2595020..2595631	+	203	21284161	-	MW2432	-	hypothetical protein
2433	 30.89	0	2596149..2596844	+	231	21284162	-	MW2433	-	hypothetical protein
2434	 26.46	-1	2596846..2597616	+	256	21284163	-	MW2434	-	hypothetical protein
2435	 33.44	0	2597990..2599954	+	654	21284164	fbp	MW2435	-	fructose-bisphosphatase
2436	 23.08	-2	2600100..2600177	+	25	21284165	-	MW2436	-	hypothetical protein
2437	 35.93	0	2600296..2601375	+	359	21284166	-	MW2437	-	hypothetical protein
2438	 37.04	+1	2601480..2602073	-	197	21284167	-	MW2438	-	hypothetical protein
2439	 35.83	0	2602104..2603063	-	319	21284168	-	MW2439	-	hypothetical protein
2440	 35.40	0	2603140..2603574	-	144	21284169	-	MW2440	-	hypothetical protein
2441	 33.33	0	2603800..2604084	+	94	21284170	-	MW2441	-	hypothetical protein
2442	 38.29	+1	2604258..2605064	+	268	21284171	-	MW2442	-	hypothetical protein
2443	 37.05	+1	2605185..2605856	-	223	21284172	-	MW2443	-	hypothetical protein
2444	 33.90	0	2606063..2607118	+	351	21284173	ddh	MW2444	-	D-lactate dehydrogenase
2445	 34.46	0	2607365..2608165	-	266	21284174	-	MW2445	-	hypothetical protein
2446	 24.84	-2	2608486..2609121	+	211	21284175	-	MW2446	-	hypothetical protein
2447	 27.80	-1	2609136..2609858	+	240	21284176	-	MW2447	-	hypothetical protein
2448	 32.85	0	2610020..2610640	-	206	21284177	srtA	MW2448	-	sortase
2449	 37.20	+1	2610834..2611325	+	163	21284178	-	MW2449	-	hypothetical protein
2450	 31.58	0	2611891..2612061	-	56	21284179	-	MW2450	-	hypothetical protein
2451	 41.11	+2	2612240..2613139	-	299	21284180	-	MW2451	-	hypothetical protein
2452	 32.75	0	2613153..2613833	-	226	21284181	-	MW2452	-	hypothetical protein
2453	 37.45	+1	2613836..2614879	-	347	21284182	-	MW2453	-	hypothetical protein
2454	 31.86	0	2615429..2615632	+	67	21284183	-	MW2454	-	hypothetical protein
2455	 34.84	0	2615824..2616750	+	308	21284184	-	MW2455	-	hypothetical protein
2456	 37.05	+1	2616831..2617799	-	322	21284185	-	MW2456	-	hypothetical protein
2457	 36.23	0	2617932..2618276	-	114	21284186	-	MW2457	-	hypothetical protein
2458	 37.23	+1	2618318..2618728	-	136	21284187	-	MW2458	-	hypothetical protein
2459	 36.48	+1	2619093..2621159	-	688	21284188	ptsG	MW2459	-	PTS system glucose-specific IIABC component
2460	 34.89	0	2621460..2623199	-	579	21284189	-	MW2460	-	pyruvate oxidase
2461	 34.06	0	2623246..2623935	-	229	21284190	-	MW2461	-	hypothetical protein
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.