IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2302	 31.68	0	2453026..2453448	+	140	21284031	-	MW2302	-	hypothetical protein
2303	 28.01	-1	2453713..2454069	+	118	21284032	-	MW2303	-	hypothetical protein
2304	 33.10	0	2454279..2455556	-	425	21284033	gltT	MW2304	-	proton/sodium-glutamate symport protein
2305	 27.05	-1	2455738..2456103	-	121	21284034	-	MW2305	-	hypothetical protein
2306	 28.19	-1	2456501..2456947	+	148	21284035	-	MW2306	-	hypothetical protein
2307	 29.79	0	2457169..2457591	+	140	21284036	-	MW2307	-	hypothetical protein
2308	 34.27	0	2457698..2458867	-	389	21284037	narK	MW2308	-	nitrite extrusion protein
2309	 20.83	-2	2458938..2459057	+	39	21284038	-	MW2309	-	hypothetical protein
2310	 29.33	-1	2459236..2459760	+	174	21284039	-	MW2310	-	hypothetical protein
2311	 32.79	0	2459786..2460151	+	121	21284040	-	MW2311	-	hypothetical protein
2312	 27.94	-1	2460130..2460870	+	246	21284041	-	MW2312	-	hypothetical protein
2313	 33.94	0	2461128..2461781	-	217	21284042	-	MW2313	-	hypothetical protein
2314	 33.72	0	2461804..2462838	-	344	21284043	-	MW2314	-	hypothetical protein
2315	 33.11	0	2462862..2463314	-	150	21284044	-	MW2315	-	hypothetical protein
2316	 32.45	0	2463334..2464011	-	225	21284045	narI	MW2316	-	nitrate reductase gamma chain
2317	 30.80	0	2464004..2464594	-	196	21284046	-	MW2317	-	hypothetical protein
2318	 38.01	+1	2464572..2466131	-	519	21284047	narH	MW2318	-	nitrate reductase beta chain narH
2319	 38.24	+1	2466121..2469810	-	1229	21284048	narG	MW2319	-	respiratory nitrate reductase alpha chain
2320	 37.32	+1	2470118..2471095	-	325	21284049	nasF	MW2320	-	uroporphyrin-III C-methyl transferase
2321	 35.56	0	2471086..2471400	-	104	21284050	nasE	MW2321	-	assimilatory nitrite reductase
2322	 36.49	+1	2471404..2473809	-	801	21284051	nasD	MW2322	-	nitrite reductase
2323	 35.93	0	2473875..2474606	-	243	21284052	-	MW2323	-	hypothetical protein
2324	 36.74	+1	2474835..2475362	-	175	21284053	-	MW2324	-	hypothetical protein
2325	 33.70	0	2475606..2476430	-	274	21284054	-	MW2325	-	hypothetical protein
2326	 24.59	-2	2476647..2476829	-	60	21284055	-	MW2326	-	hypothetical protein
2327	 34.19	0	2476913..2477380	-	155	21284056	-	MW2327	-	hypothetical protein
2328	 31.85	0	2477566..2479113	-	515	21284057	-	MW2328	-	hypothetical protein
2329	 30.71	0	2479407..2479673	-	88	21284058	-	MW2329	-	hypothetical protein
2330	 31.75	0	2479673..2479924	-	83	21284059	-	MW2330	-	hypothetical protein
2331	 29.67	0	2480197..2480796	-	199	21284060	-	MW2331	-	hypothetical protein
2332	 30.30	0	2480815..2481177	-	120	21284061	-	MW2332	-	hypothetical protein
2333	 33.17	0	2481433..2482683	+	416	21284062	fmhA	MW2333	-	fmhA protein
2334	 34.43	0	2482780..2483511	-	243	21284063	-	MW2334	-	hypothetical protein
2335	 34.34	0	2483508..2484002	-	164	21284064	-	MW2335	-	hypothetical protein
2336	 32.05	0	2484208..2484987	-	259	21284065	-	MW2336	-	hypothetical protein
2337	 33.96	0	2485108..2486547	-	479	21284066	-	MW2337	-	hypothetical protein
2338	 30.48	0	2486721..2486825	+	34	21284067	-	MW2338	-	hypothetical protein
2339	 33.48	0	2486979..2487665	-	228	21284068	-	MW2339	-	hypothetical protein
2340	 33.33	0	2487992..2488858	-	288	21284069	-	MW2340	-	hypothetical protein
2341	 32.42	0	2489556..2490869	+	437	21284070	sbi	MW2341	-	IgG-binding protein SBI
2342	 32.69	0	2491405..2492334	+	309	21284071	hlgA	MW2342	-	gamma-hemolysin chain II precursor
2343	 33.23	0	2492902..2493849	+	315	21284072	hlgC	MW2343	-	gamma-hemolysin component C
2344	 32.00	0	2493851..2494828	+	325	21284073	hlgB	MW2344	-	gamma-hemolysin component B
2345	 29.70	0	2494880..2495347	-	155	21284074	-	MW2345	-	hypothetical protein
2346	 32.76	0	2495358..2496050	-	230	21284075	-	MW2346	-	6-carboxyhexanoate--CoA ligase
2347	 30.47	0	2496061..2497176	-	371	21284076	-	MW2347	-	hypothetical protein
2348	 33.63	0	2497154..2498161	-	335	21284077	bioB	MW2348	-	biotin synthase
2349	 33.92	0	2498163..2499521	-	452	21284078	bioA	MW2349	-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase
2350	 31.88	0	2499499..2500185	-	228	21284079	bioD	MW2350	-	dethiobiotin synthetase
2351	 29.99	0	2500638..2502371	-	577	21284080	-	MW2351	-	hypothetical protein
2352	 31.41	0	2502396..2504159	-	587	21284081	-	MW2352	-	hypothetical protein
2353	 27.78	-1	2504709..2504816	-	35	21284082	-	MW2353	-	hypothetical protein
2354	 34.51	0	2504847..2505101	+	84	21284083	-	MW2354	-	hypothetical protein
2355	 29.20	-1	2505084..2505470	-	128	21284084	-	MW2355	-	hypothetical protein
2356	 38.76	+1	2505728..2506870	+	380	21284085	-	MW2356	-	hypothetical protein
2357	 31.36	0	2506930..2507589	+	219	21284086	-	MW2357	-	hypothetical protein
2358	 34.90	0	2507771..2508982	+	403	21284087	-	MW2358	-	hypothetical protein
2359	 35.44	0	2509105..2509578	-	157	21284088	-	MW2359	-	hypothetical protein
2360	 35.77	0	2509691..2510347	+	218	21284089	-	MW2360	-	hypothetical protein
2361	 34.20	0	2510410..2511216	-	268	21284090	-	MW2361	-	hypothetical protein
2362	 34.96	0	2511502..2512911	+	469	21284091	-	MW2362	-	hypothetical protein
2363	 32.42	0	2513049..2515127	+	692	21284092	-	MW2363	-	hypothetical protein
2364	 34.21	0	2515267..2517096	-	609	21284093	-	MW2364	-	hypothetical protein
2365	 31.80	0	2517328..2518824	+	498	21284094	-	MW2365	-	hypothetical protein
2366	 35.80	0	2518916..2519767	-	283	21284095	-	MW2366	-	hypothetical protein
2367	 35.68	0	2520089..2521024	-	311	21284096	-	MW2367	-	2-dehydropantoate 2-reductase
2368	 34.40	0	2521250..2522650	-	466	21284097	-	MW2368	-	hypothetical protein
2369	 35.63	0	2522944..2523639	-	231	21284098	opuCD	MW2369	-	glycine betaine/carnitine/choline ABC transporter opuCD
2370	 35.46	0	2523639..2524580	-	313	21284099	opuCC	MW2370	-	glycine betaine/carnitine/choline ABC transporter opuCC (osmoprotec)
2371	 35.69	0	2524597..2525232	-	211	21284100	opuCB	MW2371	-	glycine betaine/carnitine/choline ABC transporter opuCB
2372	 36.25	0	2525229..2526461	-	410	21284101	opuCA	MW2372	-	glycine betaine/carnitine/choline ABC transporter opuCA
2373	 32.00	0	2527125..2527724	-	199	21284102	-	MW2373	-	hypothetical protein
2374	 36.32	+1	2527904..2529541	+	545	21284103	-	MW2374	-	hypothetical protein
2375	 34.89	0	2529848..2531200	+	450	21284104	-	MW2375	-	hypothetical protein
2376	 35.19	0	2531262..2532449	-	395	21284105	-	MW2376	-	hypothetical protein
2377	 35.26	0	2532845..2533621	-	258	21284106	-	MW2377	-	hypothetical protein
2378	 34.54	0	2533614..2534276	-	220	21284107	-	MW2378	-	hypothetical protein
2379	 37.70	+1	2534524..2535600	-	358	21284108	-	MW2379	-	hypothetical protein
2380	 28.09	-1	2535956..2536222	-	88	21284109	-	MW2380	-	hypothetical protein
2381	 28.29	-1	2536222..2536479	-	85	21284110	-	MW2381	-	hypothetical protein
2382	 28.29	-1	2536838..2537293	+	151	21284111	-	MW2382	-	hypothetical protein
2383	 35.68	0	2537461..2539038	-	525	21284112	-	MW2383	-	hypothetical protein
2384	 30.27	0	2539234..2539983	+	249	21284113	-	MW2384	-	hypothetical protein
2385	 38.10	+1	2540132..2540257	-	41	21284114	-	MW2385	-	hypothetical protein
2386	 36.68	+1	2540345..2541538	-	397	21284115	-	MW2386	-	hypothetical protein
2387	 34.80	0	2541550..2542299	-	249	21284116	opp-1F	MW2387	-	oligopeptide transporter ATPase subunit
2388	 35.05	0	2542292..2543107	-	271	21284117	opp-1D	MW2388	-	oligopeptide transporter ATPase subunit
2389	 35.75	0	2543104..2543973	-	289	21284118	opp-1C	MW2389	-	oligopeptide transporter permease
2390	 33.76	0	2543970..2544905	-	311	21284119	opp-1B	MW2390	-	oligopeptide transporter permease
2391	 34.65	0	2544918..2546516	-	532	21284120	opp-1A	MW2391	-	oligopeptide transporter substrate binding protein
2392	 36.25	0	2546656..2547960	-	434	21284121	-	MW2392	-	hypothetical protein
2393	 33.82	0	2547953..2548771	-	272	21284122	-	MW2393	-	hypothetical protein
2394	 35.52	0	2548782..2549603	-	273	21284123	-	MW2394	-	hypothetical protein
2395	 25.07	-2	2550354..2550716	-	120	21284124	-	MW2395	-	hypothetical protein
2396	 40.29	+2	2550979..2551797	-	272	21284125	-	MW2396	-	short chain dehydrogenase
2397	 36.32	+1	2552032..2553570	+	512	21284126	-	MW2397	-	hypothetical protein
2398	 28.13	-1	2553682..2554104	-	140	21284127	-	MW2398	-	hypothetical protein
2399	 31.19	0	2554556..2554975	-	139	21284128	-	MW2399	-	hypothetical protein
2400	 29.52	0	2554993..2555412	-	139	21284129	-	MW2400	-	hypothetical protein
2401	 27.01	-1	2555439..2555849	-	136	21284130	-	MW2401	-	hypothetical protein
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.