IslandPathversion 1.0

IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 32.85 STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
187	 32.06	0	220684..221310	-	208	21281916	acpD	MW0187	-	azoreductase
188	 36.10	0	221519..222097	+	192	21281917	-	MW0188	-	hypothetical protein
189	 35.06	0	222480..223577	+	365	21281918	msmX	MW0189	-	multiple sugar-binding transport ATP-binding protein
190	 34.04	0	223590..224861	+	423	21281919	-	MW0190	-	hypothetical protein
191	 35.54	0	224864..226132	+	422	21281920	-	MW0191	-	hypothetical protein
192	 33.93	0	226134..226973	+	279	21281921	-	MW0192	-	hypothetical protein
193	 38.89	+1	227044..228123	+	359	21281922	-	MW0193	-	hypothetical protein
194	 39.39	+1	228148..229188	+	346	21281923	-	MW0194	-	hypothetical protein
195	 35.91	0	229243..230211	+	322	21281924	-	MW0195	-	hypothetical protein
196	 26.46	-1	230572..231066	-	164	21281925	-	MW0196	-	hypothetical protein
197	 36.09	0	231299..232678	+	459	21281926	uhpT	MW0197	-	sugar phosphate antiporter
198	 32.15	0	233037..233795	-	252	21281927	-	MW0198	-	hypothetical protein
199	 32.88	0	233788..235344	-	518	21281928	-	MW0199	-	hypothetical protein
200	 34.26	0	235341..236309	-	322	21281929	-	MW0200	-	hypothetical protein
201	 36.67	+1	236897..239146	+	749	21281930	pflB	MW0201	-	formate acetyltransferase
202	 36.38	+1	239169..239924	+	251	21281931	pflA	MW0202	-	formate acetyltransferase activating enzyme
203	 32.04	0	239914..240222	+	102	21281932	-	MW0203	-	hypothetical protein
204	 31.07	0	240260..242023	+	587	21281933	-	MW0204	-	hypothetical protein
205	 32.46	0	242187..242531	-	114	21281934	-	MW0205	-	hypothetical protein
206	 34.44	0	242721..244622	+	633	21281935	coa	MW0206	-	staphylocoagulase precursor
207	 43.04	+2	245225..246409	-	394	21281936	-	MW0207	-	hypothetical protein
208	 37.53	+1	246439..248700	-	753	21281937	-	MW0208	-	hypothetical protein
209	 39.44	+1	248887..250098	-	403	21281938	-	MW0209	-	hypothetical protein
210	 37.38	+1	250210..251715	-	501	21281939	-	MW0210	-	hypothetical protein
211	 36.92	+1	251741..253303	-	520	21281940	-	MW0211	-	hypothetical protein
212	 33.95	0	253759..254901	+	380	21281941	-	MW0212	-	hypothetical protein
213	 31.30	0	255215..256690	-	491	21281942	-	MW0213	-	hypothetical protein
214	 35.01	0	256888..257244	-	118	21281943	-	MW0214	-	hypothetical protein
215	 24.71	-2	257401..257574	-	57	21281944	-	MW0215	-	hypothetical protein
216	 34.99	0	257600..258745	-	381	21281945	-	MW0216	-	hypothetical protein
217	 37.21	+1	259318..260271	+	317	21281946	lctE	MW0217	-	L-lactate dehydrogenase
218	 39.28	+1	260591..262120	-	509	21281947	-	MW0218	-	hypothetical protein
219	 39.64	+1	262482..263417	+	311	21281948	-	MW0219	-	hypothetical protein
220	 32.86	0	263754..265850	+	698	21281949	-	MW0220	-	hypothetical protein
221	 35.26	0	265835..266302	+	155	21281950	-	MW0221	-	hypothetical protein
222	 31.18	0	266325..266603	+	92	21281951	-	MW0222	-	hypothetical protein
223	 36.83	+1	266830..268089	+	419	21281952	gatC	MW0223	-	PTS galactitol-specific enzyme IIC component
224	 36.65	+1	268107..269162	+	351	21281953	-	MW0224	-	sorbitol dehydrogenase
225	 29.93	0	269164..269310	+	48	21281954	-	MW0225	-	hypothetical protein
226	 37.84	+1	269334..270377	+	347	21281955	-	MW0226	-	hypothetical protein
227	 32.78	0	270905..271621	+	238	21281956	ispD	MW0227	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
228	 35.38	0	271614..272639	+	341	21281957	-	MW0228	-	hypothetical protein
229	 32.57	0	272661..274355	+	564	21281958	-	MW0229	-	hypothetical protein
230	 33.76	0	275381..276550	+	389	21281959	-	MW0230	-	hypothetical protein
231	 32.22	0	276826..277542	+	238	21281960	ispD	MW0231	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
232	 33.63	0	277535..278560	+	341	21281961	-	MW0232	-	hypothetical protein
233	 31.85	0	278582..280270	+	562	21281962	-	MW0233	-	hypothetical protein
234	 32.11	0	280303..282024	+	573	21281963	-	MW0234	-	hypothetical protein
235	 32.59	0	282168..282842	+	224	21281964	scdA	MW0235	-	cell wall biosynthesis protein ScdA
236	 35.61	0	283086..284840	+	584	21281965	lytS	MW0236	-	two-component sensor histidine kinase
237	 32.66	0	284843..285583	+	246	21281966	lytR	MW0237	-	two-component response regulator
238	 34.25	0	285702..286139	+	145	21281967	lrgA	MW0238	-	murein hydrolase regulator LrgA
239	 36.61	+1	286132..286833	+	233	21281968	lrgB	MW0239	-	antiholin-like protein LrgB
240	 33.19	0	286941..287645	-	234	21281969	-	MW0240	-	hypothetical protein
241	 35.48	0	287794..288585	+	263	21281970	-	MW0241	-	hypothetical protein
242	 36.88	+1	288601..290037	+	478	21281971	bglA	MW0242	-	6-phospho-beta-glucosidase
243	 33.99	0	290585..291346	-	253	21281972	-	MW0243	-	hypothetical protein
244	 37.49	+1	291597..292511	-	304	21281973	rbsK	MW0244	-	ribokinase
245	 32.10	0	292539..292943	-	134	21281974	rbsD	MW0245	-	D-ribose pyranase
246	 38.44	+1	292958..293839	-	293	21281975	-	MW0246	-	hypothetical protein
247	 37.24	+1	294071..295069	-	332	21281976	-	MW0247	-	hypothetical protein
248	 16.67	-2	295287..295400	+	37	21281977	-	MW0248	-	truncated NADH dehydrogenase subunit
249	 26.72	-1	295450..295842	+	130	21281978	-	MW0249	-	hypothetical protein
250	 37.55	+1	295970..297346	-	458	21281979	-	MW0250	-	hypothetical protein
251	 35.85	0	297580..298572	+	330	21281980	-	MW0251	-	hypothetical protein
252	 39.96	+2	298898..299848	+	316	21281981	lytM	MW0252	-	peptidoglycan hydrolase
253	 32.12	0	299900..300559	-	219	21281982	-	MW0253	-	hypothetical protein
254	 31.27	0	300573..301493	-	306	21281983	-	MW0254	-	hypothetical protein
255	 32.13	0	301490..302656	-	388	21281984	-	MW0255	-	hypothetical protein
256	 28.67	-1	302724..304247	-	507	21281985	-	MW0256	-	hypothetical protein
257	 37.47	+1	304578..305471	-	297	21281986	-	MW0257	-	hypothetical protein
258	 37.76	+1	305719..306012	+	97	21281987	-	MW0258	-	hypothetical protein
259	 30.79	0	306095..309124	+	1009	21281988	-	MW0259	-	hypothetical protein
260	 32.90	0	309124..309582	+	152	21281989	-	MW0260	-	hypothetical protein
261	 29.63	0	309554..309796	+	80	21281990	-	MW0261	-	hypothetical protein
262	 29.81	0	309809..311143	+	444	21281991	-	MW0262	-	hypothetical protein
263	 33.74	0	311165..315604	+	1479	21281992	-	MW0263	-	hypothetical protein
264	 30.53	0	315634..316026	+	130	21281993	-	MW0264	-	hypothetical protein
265	 38.41	+1	316042..316356	+	104	21281994	-	MW0265	-	hypothetical protein
266	 29.06	-1	316353..317030	+	225	21281995	-	MW0266	-	hypothetical protein
267	 36.79	+1	317030..317347	+	105	21281996	-	MW0267	-	hypothetical protein
268	 35.71	0	317348..319201	+	617	21281997	-	MW0268	-	hypothetical protein
269	 29.70	0	319212..319706	+	164	21281998	-	MW0269	-	hypothetical protein
270	 27.49	-1	319917..320600	+	227	21281999	-	MW0270	-	hypothetical protein
271	 28.27	-1	320747..321358	+	203	21282000	-	MW0271	-	hypothetical protein
272	 30.14	0	321557..322057	+	166	21282001	-	MW0272	-	hypothetical protein
273	 27.94	-1	322068..322568	+	166	21282002	-	MW0273	-	hypothetical protein
274	 29.34	-1	322579..323079	+	166	21282003	-	MW0274	-	hypothetical protein
275	 29.74	0	323090..323590	+	166	21282004	-	MW0275	-	hypothetical protein
276	 29.14	-1	323601..324101	+	166	21282005	-	MW0276	-	hypothetical protein
277	 31.14	0	324112..324612	+	166	21282006	-	MW0277	-	hypothetical protein
278	 29.14	-1	324623..325123	+	166	21282007	-	MW0278	-	hypothetical protein
279	 30.88	0	325134..325622	+	162	21282008	-	MW0279	-	hypothetical protein
280	 26.40	-1	326247..326621	+	124	21282009	-	MW0280	-	hypothetical protein
281	 31.33	0	326771..327169	+	132	21282010	-	MW0281	-	hypothetical protein
282	 33.33	0	327419..328243	-	274	21282011	-	MW0282	-	hypothetical protein
283	 35.63	0	328482..329789	-	435	21282012	-	MW0283	-	hypothetical protein
284	 32.77	0	330373..331263	+	296	21282013	-	MW0284	-	hypothetical protein
285	 32.86	0	331513..332562	+	349	21282014	-	MW0285	-	hypothetical protein
286	 33.78	0	332575..333252	+	225	21282015	-	MW0286	-	hypothetical protein
32.85	MEAN

3.41	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.