IslandPathversion 1.0

IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 32.85 STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2250	 37.08	+1	2395960..2397081	-	373	21283979	-	MW2250	-	hypothetical protein
2251	 36.24	0	2397357..2398595	-	412	21283980	hutI	MW2251	-	imidazolonepropionase
2252	 39.53	+1	2398595..2400256	-	553	21283981	hutU	MW2252	-	urocanate hydratase
2253	 31.30	0	2400416..2401300	+	294	21283982	-	MW2253	-	hypothetical protein
2254	 36.54	+1	2401793..2402728	-	311	21283983	-	MW2254	-	formimidoylglutamase
2255	 33.57	0	2403018..2404277	+	419	21283984	-	MW2255	-	hypothetical protein
2256	 33.48	0	2404343..2405029	-	228	21283985	-	MW2256	-	hypothetical protein
2257	 33.64	0	2405203..2405856	+	217	21283986	-	MW2257	-	hypothetical protein
2258	 31.57	0	2406092..2407111	-	339	21283987	-	MW2258	-	hypothetical protein
2259	 38.53	+1	2407141..2407467	-	108	21283988	-	MW2259	-	hypothetical protein
2260	 31.31	0	2407685..2408917	-	410	21283989	-	MW2260	-	hypothetical protein
2261	 34.44	0	2408910..2409809	-	299	21283990	-	MW2261	-	hypothetical protein
2262	 30.92	0	2410040..2410660	-	206	21283991	-	MW2263	-	hypothetical protein
2263	 26.83	-1	2410652..2410774	+	40	21283992	-	MW2262	-	hypothetical protein
2264	 26.52	-1	2410840..2410971	+	43	21283993	-	MW2264	-	hypothetical protein
2265	 37.93	+1	2411059..2411667	+	202	21283994	-	MW2265	-	hypothetical protein
2266	 32.51	0	2412004..2413212	+	402	21283995	-	MW2266	-	hypothetical protein
2267	 37.71	+1	2413260..2414309	-	349	21283996	fni	MW2267	-	isopentenyl pyrophosphate isomerase
2268	 29.54	0	2414340..2415287	-	315	21283997	-	MW2268	-	hypothetical protein
2269	 31.91	0	2415384..2415875	+	163	21283998	-	MW2269	-	hypothetical protein
2270	 31.67	0	2415872..2416291	+	139	21283999	-	MW2270	-	hypothetical protein
2271	 32.90	0	2416399..2417319	-	306	21284000	-	MW2271	-	hypothetical protein
2272	 30.83	0	2417527..2418165	+	212	21284001	-	MW2272	-	hypothetical protein
2273	 33.39	0	2418411..2420342	-	643	21284002	-	MW2273	-	hypothetical protein
2274	 33.18	0	2420355..2421002	-	215	21284003	-	MW2274	-	hypothetical protein
2275	 28.99	-1	2421123..2421674	+	183	21284004	-	MW2275	-	hypothetical protein
2276	 33.58	0	2421904..2423112	-	402	21284005	tcaB	MW2276	-	TcaB protein
2277	 31.45	0	2423381..2424763	-	460	21284006	tcaA	MW2277	-	TcaA protein
2278	 28.73	-1	2425003..2425458	-	151	21284007	tcaR	MW2278	-	TcaR transcription regulator
2279	 30.96	0	2425653..2426621	+	322	21284008	-	MW2279	-	hypothetical protein
2280	 35.29	0	2426852..2427517	-	221	21284009	-	MW2280	-	hypothetical protein
2281	 30.40	0	2427517..2428572	-	351	21284010	-	MW2281	-	hypothetical protein
2282	 35.56	0	2428708..2429382	+	224	21284011	-	MW2282	-	hypothetical protein
2283	 31.22	0	2429375..2430748	+	457	21284012	-	MW2283	-	hypothetical protein
2284	 28.38	-1	2430911..2431354	+	147	21284013	-	MW2284	-	hypothetical protein
2285	 30.92	0	2431351..2431806	+	151	21284014	-	MW2285	-	hypothetical protein
2286	 35.94	0	2431872..2433407	-	511	21284015	-	MW2286	-	malate:quinone oxidoreductase
2287	 32.27	0	2433731..2435329	-	532	21284016	-	MW2287	-	hypothetical protein
2288	 32.74	0	2435646..2437319	+	557	21284017	-	MW2288	-	hypothetical protein
2289	 30.24	0	2437473..2438087	-	204	21284018	-	MW2289	-	hypothetical protein
2290	 31.40	0	2438401..2438916	-	171	21284019	-	MW2290	-	hypothetical protein
2291	 36.62	+1	2439107..2440111	+	334	21284020	-	MW2291	-	hypothetical protein
2292	 28.29	-1	2440354..2441601	+	415	21284021	-	MW2292	-	hypothetical protein
2293	 36.57	+1	2441877..2442278	-	133	21284022	-	MW2293	-	hypothetical protein
2294	 35.17	0	2442314..2443348	-	344	21284023	-	MW2294	-	hypothetical protein
2295	 30.79	0	2443580..2444011	-	143	21284024	-	MW2295	-	hypothetical protein
2296	 31.85	0	2444218..2445495	-	425	21284025	-	MW2296	-	hypothetical protein
2297	 30.93	0	2445656..2446279	+	207	21284026	-	MW2297	-	hypothetical protein
2298	 29.84	0	2446325..2447269	+	314	21284027	-	MW2298	-	hypothetical protein
2299	 35.27	0	2447354..2448796	-	480	21284028	scrA	MW2299	-	PTS system sucrose-specific IIBC component
2300	 30.73	0	2448979..2449362	+	127	21284029	-	MW2300	-	hypothetical protein
2301	 28.54	-1	2450850..2452955	+	701	21284030	-	MW2301	-	hypothetical protein
2302	 31.68	0	2453026..2453448	+	140	21284031	-	MW2302	-	hypothetical protein
2303	 28.01	-1	2453713..2454069	+	118	21284032	-	MW2303	-	hypothetical protein
2304	 33.10	0	2454279..2455556	-	425	21284033	gltT	MW2304	-	proton/sodium-glutamate symport protein
2305	 27.05	-1	2455738..2456103	-	121	21284034	-	MW2305	-	hypothetical protein
2306	 28.19	-1	2456501..2456947	+	148	21284035	-	MW2306	-	hypothetical protein
2307	 29.79	0	2457169..2457591	+	140	21284036	-	MW2307	-	hypothetical protein
2308	 34.27	0	2457698..2458867	-	389	21284037	narK	MW2308	-	nitrite extrusion protein
2309	 20.83	-2	2458938..2459057	+	39	21284038	-	MW2309	-	hypothetical protein
2310	 29.33	-1	2459236..2459760	+	174	21284039	-	MW2310	-	hypothetical protein
2311	 32.79	0	2459786..2460151	+	121	21284040	-	MW2311	-	hypothetical protein
2312	 27.94	-1	2460130..2460870	+	246	21284041	-	MW2312	-	hypothetical protein
2313	 33.94	0	2461128..2461781	-	217	21284042	-	MW2313	-	hypothetical protein
2314	 33.72	0	2461804..2462838	-	344	21284043	-	MW2314	-	hypothetical protein
2315	 33.11	0	2462862..2463314	-	150	21284044	-	MW2315	-	hypothetical protein
2316	 32.45	0	2463334..2464011	-	225	21284045	narI	MW2316	-	nitrate reductase gamma chain
2317	 30.80	0	2464004..2464594	-	196	21284046	-	MW2317	-	hypothetical protein
2318	 38.01	+1	2464572..2466131	-	519	21284047	narH	MW2318	-	nitrate reductase beta chain narH
2319	 38.24	+1	2466121..2469810	-	1229	21284048	narG	MW2319	-	respiratory nitrate reductase alpha chain
2320	 37.32	+1	2470118..2471095	-	325	21284049	nasF	MW2320	-	uroporphyrin-III C-methyl transferase
2321	 35.56	0	2471086..2471400	-	104	21284050	nasE	MW2321	-	assimilatory nitrite reductase
2322	 36.49	+1	2471404..2473809	-	801	21284051	nasD	MW2322	-	nitrite reductase
2323	 35.93	0	2473875..2474606	-	243	21284052	-	MW2323	-	hypothetical protein
2324	 36.74	+1	2474835..2475362	-	175	21284053	-	MW2324	-	hypothetical protein
2325	 33.70	0	2475606..2476430	-	274	21284054	-	MW2325	-	hypothetical protein
2326	 24.59	-2	2476647..2476829	-	60	21284055	-	MW2326	-	hypothetical protein
2327	 34.19	0	2476913..2477380	-	155	21284056	-	MW2327	-	hypothetical protein
2328	 31.85	0	2477566..2479113	-	515	21284057	-	MW2328	-	hypothetical protein
2329	 30.71	0	2479407..2479673	-	88	21284058	-	MW2329	-	hypothetical protein
2330	 31.75	0	2479673..2479924	-	83	21284059	-	MW2330	-	hypothetical protein
2331	 29.67	0	2480197..2480796	-	199	21284060	-	MW2331	-	hypothetical protein
2332	 30.30	0	2480815..2481177	-	120	21284061	-	MW2332	-	hypothetical protein
2333	 33.17	0	2481433..2482683	+	416	21284062	fmhA	MW2333	-	fmhA protein
2334	 34.43	0	2482780..2483511	-	243	21284063	-	MW2334	-	hypothetical protein
2335	 34.34	0	2483508..2484002	-	164	21284064	-	MW2335	-	hypothetical protein
2336	 32.05	0	2484208..2484987	-	259	21284065	-	MW2336	-	hypothetical protein
2337	 33.96	0	2485108..2486547	-	479	21284066	-	MW2337	-	hypothetical protein
2338	 30.48	0	2486721..2486825	+	34	21284067	-	MW2338	-	hypothetical protein
2339	 33.48	0	2486979..2487665	-	228	21284068	-	MW2339	-	hypothetical protein
2340	 33.33	0	2487992..2488858	-	288	21284069	-	MW2340	-	hypothetical protein
2341	 32.42	0	2489556..2490869	+	437	21284070	sbi	MW2341	-	IgG-binding protein SBI
2342	 32.69	0	2491405..2492334	+	309	21284071	hlgA	MW2342	-	gamma-hemolysin chain II precursor
2343	 33.23	0	2492902..2493849	+	315	21284072	hlgC	MW2343	-	gamma-hemolysin component C
2344	 32.00	0	2493851..2494828	+	325	21284073	hlgB	MW2344	-	gamma-hemolysin component B
2345	 29.70	0	2494880..2495347	-	155	21284074	-	MW2345	-	hypothetical protein
2346	 32.76	0	2495358..2496050	-	230	21284075	-	MW2346	-	6-carboxyhexanoate--CoA ligase
2347	 30.47	0	2496061..2497176	-	371	21284076	-	MW2347	-	hypothetical protein
2348	 33.63	0	2497154..2498161	-	335	21284077	bioB	MW2348	-	biotin synthase
2349	 33.92	0	2498163..2499521	-	452	21284078	bioA	MW2349	-	adenosylmethionine-8-amino-7-oxononanoate aminotransferase
32.85	MEAN

3.41	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.