IslandPathversion 1.0

IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 32.85 STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2186	 33.43	0	2337834..2338856	-	340	21283915	moaA	MW2186	-	molybdenum cofactor biosynthesis protein A
2187	 32.17	0	2338876..2339475	-	199	21283916	mobA	MW2187	-	molybdopterin-guanine dinucleotide biosynthesis protein A
2188	 31.62	0	2339482..2339715	-	77	21283917	moaD	MW2188	-	molybdopterin synthase small subunit
2189	 36.02	0	2339721..2340167	-	148	21283918	moaE	MW2189	-	molybdopterin converting factor moa (subunit 2)
2190	 31.69	0	2340181..2340666	-	161	21283919	mobB	MW2190	-	molybdopterin-guanine dinucleotide biosynthesis mobB
2191	 37.70	+1	2340663..2341922	-	419	21283920	moeA	MW2191	-	molybdopterin biosynthesis protein moeA
2192	 37.98	+1	2341985..2342479	+	164	21283921	moaC	MW2192	-	molybdenum cofactor biosynthesis protein C
2193	 37.87	+1	2342481..2342987	-	168	21283922	moaB	MW2193	-	molybdopterin precursor biosynthesis moaB
2194	 34.73	0	2343018..2344022	-	334	21283923	moeB	MW2194	-	molybdopterin biosynthesis protein moeB
2195	 32.67	0	2344192..2344797	-	201	21283924	modC	MW2195	-	molybdenum transport ATP-binding protein ModC
2196	 34.97	0	2344798..2345469	-	223	21283925	modB	MW2196	-	molybdenum ABC transporter permease
2197	 29.37	-1	2345483..2346265	-	260	21283926	modA	MW2197	-	molybdate-binding protein
2198	 34.21	0	2346555..2347352	+	265	21283927	narQ	MW2198	-	formate dehydrogenase accessory protein
2199	 33.85	0	2347524..2348294	-	256	21283928	-	MW2199	-	hypothetical protein
2200	 34.23	0	2348371..2348925	-	184	21283929	-	MW2200	-	hypothetical protein
2201	 33.97	0	2349046..2349987	-	313	21283930	-	MW2201	-	hypothetical protein
2202	 32.01	0	2350385..2351293	-	302	21283931	-	MW2202	-	hypothetical protein
2203	 34.55	0	2351507..2352661	-	384	21283932	-	MW2203	-	hypothetical protein
2204	 26.88	-1	2352708..2352800	-	30	21283933	-	MW2204	-	hypothetical protein
2205	 32.78	0	2352878..2353783	-	301	21283934	-	MW2205	-	hypothetical protein
2206	 40.59	+2	2354043..2354345	+	100	21283935	ureA	MW2206	-	urease subunit gamma
2207	 37.23	+1	2354359..2354769	+	136	21283936	ureB	MW2207	-	urease subunit beta
2208	 37.88	+1	2354766..2356481	+	571	21283937	ureC	MW2208	-	urease subunit alpha
2209	 33.11	0	2356494..2356946	+	150	21283938	ureE	MW2209	-	urease accessory protein UreE
2210	 33.04	0	2356939..2357628	+	229	21283939	ureF	MW2210	-	urease accessory protein UreF
2211	 34.63	0	2357641..2358255	+	204	21283940	ureG	MW2211	-	urease accessory protein UreG
2212	 29.61	0	2358447..2359091	+	214	21283941	ureD	MW2212	-	urease accessory protein UreD
2213	 24.71	-2	2359280..2359627	-	115	21283942	sarR	MW2213	-	hypothetical protein
2214	 26.91	-1	2360055..2360381	-	108	21283943	-	MW2214	-	hypothetical protein
2215	 27.96	-1	2360445..2361188	-	247	21283944	-	MW2215	-	hypothetical protein
2216	 27.97	-1	2361215..2363170	-	651	21283945	-	MW2216	-	hypothetical protein
2217	 38.89	+1	2363780..2364589	+	269	21283946	-	MW2217	-	hypothetical protein
2218	 30.23	0	2364606..2364734	-	42	21283947	-	MW2218	-	hypothetical protein
2219	 35.12	0	2365022..2366422	-	466	21283948	-	MW2219	-	hypothetical protein
2220	 33.33	0	2366517..2367599	-	360	21283949	-	MW2220	-	hypothetical protein
2221	 28.61	-1	2367847..2368269	+	140	21283950	-	MW2221	-	hypothetical protein
2222	 38.12	+1	2368506..2369006	+	166	21283951	ssaA	MW2222	-	hypothetical protein
2223	 29.05	-1	2369102..2369311	+	69	21283952	-	MW2223	-	hypothetical protein
2224	 35.74	0	2369368..2370321	+	317	21283953	-	MW2224	-	glycerate dehydrogenase
2225	 32.98	0	2370402..2371526	-	374	21283954	-	MW2225	-	hypothetical protein
2226	 32.56	0	2372251..2373027	-	258	21283955	-	MW2226	-	hypothetical protein
2227	 27.78	-1	2373049..2373300	-	83	21283956	-	MW2227	-	hypothetical protein
2228	 31.22	0	2373510..2373983	-	157	21283957	-	MW2228	-	hypothetical protein
2229	 35.53	0	2373983..2376937	-	984	21283958	-	MW2229	-	hypothetical protein
2230	 34.92	0	2377539..2378486	-	315	21283959	-	MW2230	-	hypothetical protein
2231	 32.08	0	2378619..2379416	-	265	21283960	-	MW2231	-	hypothetical protein
2232	 30.88	0	2379801..2380493	+	230	21283961	-	MW2232	-	hypothetical protein
2233	 27.94	-1	2380849..2381163	+	104	21283962	-	MW2233	-	putative transposase
2234	 30.35	0	2381140..2381877	-	245	21283963	-	MW2234	-	hypothetical protein
2235	 25.45	-2	2381926..2382255	+	109	21283964	-	MW2235	-	hypothetical protein
2236	 29.32	-1	2382700..2383572	+	290	21283965	-	MW2236	-	hypothetical protein
2237	 34.13	0	2383959..2385338	-	459	21283966	-	MW2237	-	hypothetical protein
2238	 33.89	0	2385618..2385974	+	118	21283967	-	MW2238	-	hypothetical protein
2239	 29.03	-1	2385971..2386156	+	61	21283968	-	MW2239	-	hypothetical protein
2240	 32.29	0	2386252..2386443	-	63	21283969	-	MW2240	-	hypothetical protein
2241	 33.18	0	2386454..2387089	-	211	21283970	-	MW2241	-	hypothetical protein
2242	 34.10	0	2387164..2388081	-	305	21283971	-	MW2242	-	hypothetical protein
2243	 29.76	0	2388349..2388879	+	176	21283972	-	MW2243	-	hypothetical protein
2244	 35.70	0	2388945..2390549	-	534	21283973	glvC	MW2244	-	PTS system arbutin-like IIBC component
2245	 29.93	0	2390879..2391643	+	254	21283974	-	MW2245	-	hypothetical protein
2246	 33.93	0	2391701..2392207	-	168	21283975	-	MW2246	-	hypothetical protein
2247	 35.43	0	2392374..2393753	-	459	21283976	-	MW2247	-	hypothetical protein
2248	 28.25	-1	2393912..2394481	-	189	21283977	-	MW2248	-	hypothetical protein
2249	 39.00	+1	2394968..2395849	-	293	21283978	-	MW2249	-	hypothetical protein
2250	 37.08	+1	2395960..2397081	-	373	21283979	-	MW2250	-	hypothetical protein
2251	 36.24	0	2397357..2398595	-	412	21283980	hutI	MW2251	-	imidazolonepropionase
2252	 39.53	+1	2398595..2400256	-	553	21283981	hutU	MW2252	-	urocanate hydratase
2253	 31.30	0	2400416..2401300	+	294	21283982	-	MW2253	-	hypothetical protein
2254	 36.54	+1	2401793..2402728	-	311	21283983	-	MW2254	-	formimidoylglutamase
2255	 33.57	0	2403018..2404277	+	419	21283984	-	MW2255	-	hypothetical protein
2256	 33.48	0	2404343..2405029	-	228	21283985	-	MW2256	-	hypothetical protein
2257	 33.64	0	2405203..2405856	+	217	21283986	-	MW2257	-	hypothetical protein
2258	 31.57	0	2406092..2407111	-	339	21283987	-	MW2258	-	hypothetical protein
2259	 38.53	+1	2407141..2407467	-	108	21283988	-	MW2259	-	hypothetical protein
2260	 31.31	0	2407685..2408917	-	410	21283989	-	MW2260	-	hypothetical protein
2261	 34.44	0	2408910..2409809	-	299	21283990	-	MW2261	-	hypothetical protein
2262	 30.92	0	2410040..2410660	-	206	21283991	-	MW2263	-	hypothetical protein
2263	 26.83	-1	2410652..2410774	+	40	21283992	-	MW2262	-	hypothetical protein
2264	 26.52	-1	2410840..2410971	+	43	21283993	-	MW2264	-	hypothetical protein
2265	 37.93	+1	2411059..2411667	+	202	21283994	-	MW2265	-	hypothetical protein
2266	 32.51	0	2412004..2413212	+	402	21283995	-	MW2266	-	hypothetical protein
2267	 37.71	+1	2413260..2414309	-	349	21283996	fni	MW2267	-	isopentenyl pyrophosphate isomerase
2268	 29.54	0	2414340..2415287	-	315	21283997	-	MW2268	-	hypothetical protein
2269	 31.91	0	2415384..2415875	+	163	21283998	-	MW2269	-	hypothetical protein
2270	 31.67	0	2415872..2416291	+	139	21283999	-	MW2270	-	hypothetical protein
2271	 32.90	0	2416399..2417319	-	306	21284000	-	MW2271	-	hypothetical protein
2272	 30.83	0	2417527..2418165	+	212	21284001	-	MW2272	-	hypothetical protein
2273	 33.39	0	2418411..2420342	-	643	21284002	-	MW2273	-	hypothetical protein
2274	 33.18	0	2420355..2421002	-	215	21284003	-	MW2274	-	hypothetical protein
2275	 28.99	-1	2421123..2421674	+	183	21284004	-	MW2275	-	hypothetical protein
2276	 33.58	0	2421904..2423112	-	402	21284005	tcaB	MW2276	-	TcaB protein
2277	 31.45	0	2423381..2424763	-	460	21284006	tcaA	MW2277	-	TcaA protein
2278	 28.73	-1	2425003..2425458	-	151	21284007	tcaR	MW2278	-	TcaR transcription regulator
2279	 30.96	0	2425653..2426621	+	322	21284008	-	MW2279	-	hypothetical protein
2280	 35.29	0	2426852..2427517	-	221	21284009	-	MW2280	-	hypothetical protein
2281	 30.40	0	2427517..2428572	-	351	21284010	-	MW2281	-	hypothetical protein
2282	 35.56	0	2428708..2429382	+	224	21284011	-	MW2282	-	hypothetical protein
2283	 31.22	0	2429375..2430748	+	457	21284012	-	MW2283	-	hypothetical protein
2284	 28.38	-1	2430911..2431354	+	147	21284013	-	MW2284	-	hypothetical protein
2285	 30.92	0	2431351..2431806	+	151	21284014	-	MW2285	-	hypothetical protein
32.85	MEAN

3.41	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.