IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2077	 32.26	0	2227859..2227951	+	30	21283806	-	MW2077	-	hypothetical protein
2078	 33.57	0	2228081..2228938	-	285	21283807	-	MW2078	-	hypothetical protein
2079	 34.36	0	2229006..2229788	-	260	21283808	-	MW2079	-	hypothetical protein
2080	 35.11	0	2230020..2231825	-	601	21283809	glmS	MW2080	-	D-fructose-6-phosphate amidotransferase
2081	 19.23	-2	2232293..2232448	+	51	21283810	-	MW2081	-	hypothetical protein
2082	 35.74	0	2232506..2234044	+	512	21283811	mtlF	MW2082	-	PTS system mannitol specific IIBC component
2083	 33.38	0	2234079..2236211	+	710	21283812	-	MW2083	-	hypothetical protein
2084	 35.86	0	2236223..2236657	+	144	21283813	mtlA	MW2084	-	PTS system mannitol specific IIA component
2085	 33.33	0	2236657..2237763	+	368	21283814	mtlD	MW2085	-	mannitol-1-phosphate 5-dehydrogenase
2086	 36.34	+1	2238083..2240143	-	686	21283815	fmtB	MW2086	-	truncated FmtB protein
2087	 35.23	0	2240201..2245588	-	1795	21283816	-	MW2087	-	truncated FmtB
2088	 34.37	0	2245874..2247229	-	451	21283817	glmM	MW2088	-	phosphoglucosamine-mutase
2089	 30.12	0	2247256..2248188	-	310	21283818	-	MW2089	-	hypothetical protein
2090	 33.70	0	2248190..2248999	-	269	21283819	-	MW2090	-	hypothetical protein
2091	 31.57	0	2249188..2250096	-	302	21283820	arg	MW2091	-	arginase
2092	 36.53	+1	2256291..2257355	-	354	21283821	-	MW2092	-	hypothetical protein
2093	 33.33	0	2257503..2258945	-	480	21283822	-	MW2093	-	hypothetical protein
2094	 27.22	-1	2259268..2259741	-	157	21283823	-	MW2094	-	hypothetical protein
2095	 30.58	0	2259840..2261183	-	447	21283824	-	MW2095	-	hypothetical protein
2096	 31.58	0	2261360..2262043	-	227	21283825	-	MW2096	-	hypothetical protein
2097	 31.31	0	2262062..2263249	-	395	21283826	-	MW2097	-	hypothetical protein
2098	 34.30	0	2263293..2263808	-	171	21283827	-	MW2098	-	hypothetical protein
2099	 30.65	0	2263985..2264245	+	86	21283828	-	MW2099	-	hypothetical protein
2100	 35.81	0	2264377..2265747	-	456	21283829	-	MW2100	-	hypothetical protein
2101	 33.64	0	2265983..2266951	-	322	21283830	-	MW2101	-	hypothetical protein
2102	 34.21	0	2266948..2267979	-	343	21283831	-	MW2102	-	hypothetical protein
2103	 30.79	0	2267991..2268974	-	327	21283832	-	MW2103	-	hypothetical protein
2104	 30.81	0	2269366..2270436	-	356	21283833	-	MW2104	-	hypothetical protein
2105	 32.59	0	2270443..2272200	-	585	21283834	-	MW2105	-	hypothetical protein
2106	 31.99	0	2272187..2273380	-	397	21283835	-	MW2106	-	hypothetical protein
2107	 32.47	0	2273482..2275458	+	658	21283836	-	MW2107	-	hypothetical protein
2108	 31.76	0	2275618..2276127	-	169	21283837	asp23	MW2108	-	alkaline shock protein 23
2109	 30.42	0	2276190..2276429	-	79	21283838	-	MW2109	-	hypothetical protein
2110	 32.77	0	2276442..2276978	-	178	21283839	-	MW2110	-	hypothetical protein
2111	 35.70	0	2277153..2278715	-	520	21283840	-	MW2111	-	hypothetical protein
2112	 34.23	0	2279023..2280030	-	335	21283841	-	MW2112	-	hypothetical protein
2113	 38.22	+1	2280264..2281265	-	333	21283842	-	MW2113	-	hypothetical protein
2114	 33.56	0	2281548..2282417	-	289	21283843	-	MW2114	-	hypothetical protein
2115	 34.96	0	2282683..2284095	-	470	21283844	lacG	MW2115	-	6-phospho-beta-galactosidase
2116	 35.84	0	2284113..2285825	-	570	21283845	lacE	MW2116	-	PTS system lactose-specific IIBC component
2117	 35.90	0	2285831..2286142	-	103	21283846	lacF	MW2117	-	PTS system, lactose-specific IIA component
2118	 35.17	0	2286164..2287144	-	326	21283847	lacD	MW2118	-	tagatose 1,6-diphosphate aldolase
2119	 35.37	0	2287148..2288080	-	310	21283848	lacC	MW2119	-	tagatose-6-phosphate kinase
2120	 34.30	0	2288093..2288608	-	171	21283849	lacB	MW2120	-	galactose-6-phosphate isomerase subunit LacB
2121	 36.83	+1	2288624..2289052	-	142	21283850	lacA	MW2121	-	galactose-6-phosphate isomerase subunit LacA
2122	 34.13	0	2289420..2290175	-	251	21283851	lacR	MW2122	-	lactose phosphotransferase system repressor
2123	 35.79	0	2290426..2291157	+	243	21283852	-	MW2123	-	NAD-dependent deacetylase
2124	 30.00	0	2291206..2291355	+	49	21283853	-	MW2124	-	hypothetical protein
2125	 23.15	-2	2291448..2292056	-	202	21283854	-	MW2125	-	hypothetical protein
2126	 24.60	-2	2292318..2292443	-	41	21283855	-	MW2126	-	hypothetical protein
2127	 33.33	0	2292662..2293510	-	282	21283856	-	MW2127	-	hypothetical protein
2128	 30.22	0	2293580..2293996	-	138	21283857	-	MW2128	-	hypothetical protein
2129	 33.50	0	2294405..2296852	+	815	21283858	hysA	MW2129	-	hyaluronate lyase precursor
2130	 31.69	0	2297041..2297466	+	141	21283859	-	MW2130	-	hypothetical protein
2131	 34.18	0	2297853..2298557	-	234	21283860	-	MW2131	-	hypothetical protein
2132	 35.62	0	2298594..2300258	-	554	21283861	alsS	MW2132	-	acetolactate synthase
2133	 33.33	0	2300506..2300631	+	41	21283862	-	MW2133	-	hypothetical protein
2134	 24.59	-2	2300705..2300887	-	60	21283863	-	MW2134	-	hypothetical protein
2135	 42.53	+2	2300922..2301008	-	28	21283864	-	MW2135	-	hypothetical protein
2136	 40.60	+2	2301234..2301632	-	132	21283865	rpsI	MW2136	-	30S ribosomal protein S9
2137	 36.53	+1	2301646..2302083	-	145	21283866	rplM	MW2137	-	50S ribosomal protein L13
2138	 34.33	0	2302323..2303126	-	267	21283867	truA	MW2138	-	tRNA pseudouridine synthase A
2139	 31.60	0	2303131..2303937	-	268	21283868	-	MW2139	-	hypothetical protein
2140	 34.03	0	2303927..2304787	-	286	21283869	-	MW2140	-	cobalt transporter ATP-binding subunit
2141	 34.81	0	2304784..2305593	-	269	21283870	-	MW2141	-	cobalt transporter ATP-binding subunit
2142	 37.40	+1	2306131..2306499	-	122	21283871	rplQ	MW2142	-	50S ribosomal protein L17
2143	 33.76	0	2306516..2307460	-	314	21283872	rpoA	MW2143	-	DNA-directed RNA polymerase subunit alpha
2144	 40.00	+2	2307535..2307924	-	129	21283873	rpsK	MW2144	-	30S ribosomal protein S11
2145	 39.07	+1	2307948..2308313	-	121	21283874	rpsM	MW2145	-	30S ribosomal protein S13
2146	 28.95	-1	2308336..2308449	-	37	21283875	rpmJ	MW2146	-	50S ribosomal protein L36
2147	 33.33	0	2308481..2308699	-	72	21283876	infA	MW2147	-	translation initiation factor IF-1
2148	 35.65	0	2308892..2309539	-	215	21283877	adk	MW2148	-	adenylate kinase
2149	 34.57	0	2309556..2310848	-	430	21283878	secY	MW2149	-	preprotein translocase subunit SecY
2150	 38.78	+1	2310848..2311288	-	146	21283879	rplO	MW2150	-	50S ribosomal protein L15
2151	 35.56	0	2311305..2311484	-	59	21283880	rpmD	MW2151	-	50S ribosomal protein L30
2152	 40.72	+2	2311501..2312001	-	166	21283881	rpsE	MW2152	-	30S ribosomal protein S5
2153	 35.56	0	2312022..2312381	-	119	21283882	rplR	MW2153	-	50S ribosomal protein L18
2154	 35.20	0	2312412..2312948	-	178	21283883	rplF	MW2154	-	50S ribosomal protein L6
2155	 34.09	0	2312973..2313371	-	132	21283884	rpsH	MW2155	-	30S ribosomal protein S8
2156	 38.71	+1	2313403..2313588	-	61	21283885	rpsN	MW2156	-	30S ribosomal protein S14
2157	 34.26	0	2313611..2314150	-	179	21283886	rplE	MW2157	-	50S ribosomal protein L5
2158	 33.65	0	2314177..2314494	-	105	21283887	rplX	MW2158	-	50S ribosomal protein L24
2159	 40.92	+2	2314530..2314898	-	122	21283888	rplN	MW2159	-	50S ribosomal protein L14
2160	 30.30	0	2314930..2315193	-	87	21283889	rpsQ	MW2160	-	30S ribosomal protein S17
2161	 34.68	0	2315217..2315438	-	73	21283890	rpmC	MW2161	-	50S ribosomal protein L29
2162	 40.46	+2	2315416..2315850	-	144	21283891	rplP	MW2162	-	50S ribosomal protein L16
2163	 38.23	+1	2315853..2316506	-	217	21283892	rpsC	MW2163	-	30S ribosomal protein S3
2164	 37.29	+1	2316530..2316883	-	117	21283893	rplV	MW2164	-	50S ribosomal protein L22
2165	 37.63	+1	2316912..2317190	-	92	21283894	rpsS	MW2165	-	30S ribosomal protein S19
2166	 40.53	+2	2317257..2318090	-	277	21283895	rplB	MW2166	-	50S ribosomal protein L2
2167	 35.14	0	2318123..2318398	-	91	21283896	rplW	MW2167	-	50S ribosomal protein L23
2168	 38.94	+1	2318398..2319021	-	207	21283897	rplD	MW2168	-	50S ribosomal protein L4
2169	 38.01	+1	2319048..2319710	-	220	21283898	rplC	MW2169	-	50S ribosomal protein L3
2170	 37.54	+1	2319738..2320046	-	102	21283899	rpsJ	MW2170	-	30S ribosomal protein S10
2171	 29.23	-1	2320403..2320792	+	129	21283900	-	MW2171	-	hypothetical protein
2172	 35.58	0	2320983..2322317	-	444	21283901	-	MW2172	-	hypothetical protein
2173	 33.15	0	2322430..2324565	-	711	21283902	topB	MW2173	-	DNA topoisomerase III
2174	 31.64	0	2324752..2325639	+	295	21283903	-	MW2174	-	hypothetical protein
2175	 36.23	0	2325820..2326683	+	287	21283904	-	MW2175	-	hypothetical protein
2176	 32.34	0	2327102..2328010	-	302	21283905	-	MW2176	-	hypothetical protein
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.