IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
152	 32.45	0	173889..175139	+	416	21281881	-	MW0152	-	hypothetical protein
153	 35.23	0	175586..182761	+	2391	21281882	-	MW0153	-	hypothetical protein
154	 33.80	0	182774..183418	+	214	21281883	-	MW0154	-	hypothetical protein
155	 36.57	+1	183746..184240	-	164	21281884	-	MW0155	-	hypothetical protein
156	 34.64	0	184495..185259	-	254	21281885	-	MW0156	-	hypothetical protein
157	 38.08	+1	185275..186516	-	413	21281886	argJ	MW0157	-	bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
158	 35.47	0	186528..187559	-	343	21281887	argC	MW0158	-	N-acetyl-gamma-glutamyl-phosphate reductase
159	 37.81	+1	187598..188782	-	394	21281888	-	MW0159	-	ornithine aminotransferase
160	 32.96	0	189035..190390	-	451	21281889	-	MW0160	-	hypothetical protein
161	 35.94	0	190666..191163	-	165	21281890	-	MW0161	-	hypothetical protein
162	 36.44	+1	191290..192930	-	546	21281891	-	MW0162	-	hypothetical protein
163	 37.73	+1	193203..195248	-	681	21281892	glcA	MW0163	-	hypothetical protein
164	 35.42	0	195833..196888	+	351	21281893	-	MW0164	-	hypothetical protein
165	 38.22	+1	196885..197784	+	299	21281894	murQ	MW0165	-	N-acetylmuramic acid-6-phosphate etherase
166	 38.08	+1	197796..199250	+	484	21281895	-	MW0166	-	hypothetical protein
167	 34.36	0	199253..200128	+	291	21281896	-	MW0167	-	hypothetical protein
168	 28.72	-1	200322..200603	-	93	21281897	-	MW0168	-	hypothetical protein
169	 33.23	0	200816..203605	+	929	21281898	hsdR	MW0169	-	type I restriction enzyme restriction chain
170	 29.33	-1	203752..204351	-	199	21281899	-	MW0170	-	hypothetical protein
171	 31.75	0	204477..205232	+	251	21281900	-	MW0171	-	hypothetical protein
172	 31.42	0	205229..205909	+	226	21281901	-	MW0172	-	hypothetical protein
173	 29.74	0	205906..206100	+	64	21281902	-	MW0173	-	hypothetical protein
174	 30.90	0	206097..207083	+	328	21281903	-	MW0174	-	hypothetical protein
175	 41.44	+2	207290..207511	+	73	21281904	-	MW0175	-	hypothetical protein
176	 23.37	-2	207582..209267	+	561	21281905	-	MW0176	-	hypothetical protein
177	 25.23	-2	209326..209769	+	147	21281906	-	MW0177	-	hypothetical protein
178	 26.56	-1	209781..210503	+	240	21281907	-	MW0178	-	hypothetical protein
179	 22.60	-2	210490..210666	+	58	21281908	-	MW0179	-	hypothetical protein
180	 31.22	0	210713..210901	-	62	21281909	-	MW0180	-	hypothetical protein
181	 35.53	0	211376..212968	-	530	21281910	oppF	MW0181	-	oligopeptide transport ATP-binding protein
182	 32.88	0	213066..214403	+	445	21281911	oppB	MW0182	-	hypothetical protein
183	 34.45	0	214409..215572	+	387	21281912	-	MW0183	-	hypothetical protein
184	 33.39	0	215589..217364	+	591	21281913	rlp	MW0184	-	RGD-containing lipoprotein
185	 37.87	+1	217402..219408	+	668	21281914	-	MW0185	-	hypothetical protein
186	 29.72	0	219721..220494	-	257	21281915	-	MW0186	-	hypothetical protein
187	 32.06	0	220684..221310	-	208	21281916	acpD	MW0187	-	azoreductase
188	 36.10	0	221519..222097	+	192	21281917	-	MW0188	-	hypothetical protein
189	 35.06	0	222480..223577	+	365	21281918	msmX	MW0189	-	multiple sugar-binding transport ATP-binding protein
190	 34.04	0	223590..224861	+	423	21281919	-	MW0190	-	hypothetical protein
191	 35.54	0	224864..226132	+	422	21281920	-	MW0191	-	hypothetical protein
192	 33.93	0	226134..226973	+	279	21281921	-	MW0192	-	hypothetical protein
193	 38.89	+1	227044..228123	+	359	21281922	-	MW0193	-	hypothetical protein
194	 39.39	+1	228148..229188	+	346	21281923	-	MW0194	-	hypothetical protein
195	 35.91	0	229243..230211	+	322	21281924	-	MW0195	-	hypothetical protein
196	 26.46	-1	230572..231066	-	164	21281925	-	MW0196	-	hypothetical protein
197	 36.09	0	231299..232678	+	459	21281926	uhpT	MW0197	-	sugar phosphate antiporter
198	 32.15	0	233037..233795	-	252	21281927	-	MW0198	-	hypothetical protein
199	 32.88	0	233788..235344	-	518	21281928	-	MW0199	-	hypothetical protein
200	 34.26	0	235341..236309	-	322	21281929	-	MW0200	-	hypothetical protein
201	 36.67	+1	236897..239146	+	749	21281930	pflB	MW0201	-	formate acetyltransferase
202	 36.38	+1	239169..239924	+	251	21281931	pflA	MW0202	-	formate acetyltransferase activating enzyme
203	 32.04	0	239914..240222	+	102	21281932	-	MW0203	-	hypothetical protein
204	 31.07	0	240260..242023	+	587	21281933	-	MW0204	-	hypothetical protein
205	 32.46	0	242187..242531	-	114	21281934	-	MW0205	-	hypothetical protein
206	 34.44	0	242721..244622	+	633	21281935	coa	MW0206	-	staphylocoagulase precursor
207	 43.04	+2	245225..246409	-	394	21281936	-	MW0207	-	hypothetical protein
208	 37.53	+1	246439..248700	-	753	21281937	-	MW0208	-	hypothetical protein
209	 39.44	+1	248887..250098	-	403	21281938	-	MW0209	-	hypothetical protein
210	 37.38	+1	250210..251715	-	501	21281939	-	MW0210	-	hypothetical protein
211	 36.92	+1	251741..253303	-	520	21281940	-	MW0211	-	hypothetical protein
212	 33.95	0	253759..254901	+	380	21281941	-	MW0212	-	hypothetical protein
213	 31.30	0	255215..256690	-	491	21281942	-	MW0213	-	hypothetical protein
214	 35.01	0	256888..257244	-	118	21281943	-	MW0214	-	hypothetical protein
215	 24.71	-2	257401..257574	-	57	21281944	-	MW0215	-	hypothetical protein
216	 34.99	0	257600..258745	-	381	21281945	-	MW0216	-	hypothetical protein
217	 37.21	+1	259318..260271	+	317	21281946	lctE	MW0217	-	L-lactate dehydrogenase
218	 39.28	+1	260591..262120	-	509	21281947	-	MW0218	-	hypothetical protein
219	 39.64	+1	262482..263417	+	311	21281948	-	MW0219	-	hypothetical protein
220	 32.86	0	263754..265850	+	698	21281949	-	MW0220	-	hypothetical protein
221	 35.26	0	265835..266302	+	155	21281950	-	MW0221	-	hypothetical protein
222	 31.18	0	266325..266603	+	92	21281951	-	MW0222	-	hypothetical protein
223	 36.83	+1	266830..268089	+	419	21281952	gatC	MW0223	-	PTS galactitol-specific enzyme IIC component
224	 36.65	+1	268107..269162	+	351	21281953	-	MW0224	-	sorbitol dehydrogenase
225	 29.93	0	269164..269310	+	48	21281954	-	MW0225	-	hypothetical protein
226	 37.84	+1	269334..270377	+	347	21281955	-	MW0226	-	hypothetical protein
227	 32.78	0	270905..271621	+	238	21281956	ispD	MW0227	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
228	 35.38	0	271614..272639	+	341	21281957	-	MW0228	-	hypothetical protein
229	 32.57	0	272661..274355	+	564	21281958	-	MW0229	-	hypothetical protein
230	 33.76	0	275381..276550	+	389	21281959	-	MW0230	-	hypothetical protein
231	 32.22	0	276826..277542	+	238	21281960	ispD	MW0231	-	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
232	 33.63	0	277535..278560	+	341	21281961	-	MW0232	-	hypothetical protein
233	 31.85	0	278582..280270	+	562	21281962	-	MW0233	-	hypothetical protein
234	 32.11	0	280303..282024	+	573	21281963	-	MW0234	-	hypothetical protein
235	 32.59	0	282168..282842	+	224	21281964	scdA	MW0235	-	cell wall biosynthesis protein ScdA
236	 35.61	0	283086..284840	+	584	21281965	lytS	MW0236	-	two-component sensor histidine kinase
237	 32.66	0	284843..285583	+	246	21281966	lytR	MW0237	-	two-component response regulator
238	 34.25	0	285702..286139	+	145	21281967	lrgA	MW0238	-	murein hydrolase regulator LrgA
239	 36.61	+1	286132..286833	+	233	21281968	lrgB	MW0239	-	antiholin-like protein LrgB
240	 33.19	0	286941..287645	-	234	21281969	-	MW0240	-	hypothetical protein
241	 35.48	0	287794..288585	+	263	21281970	-	MW0241	-	hypothetical protein
242	 36.88	+1	288601..290037	+	478	21281971	bglA	MW0242	-	6-phospho-beta-glucosidase
243	 33.99	0	290585..291346	-	253	21281972	-	MW0243	-	hypothetical protein
244	 37.49	+1	291597..292511	-	304	21281973	rbsK	MW0244	-	ribokinase
245	 32.10	0	292539..292943	-	134	21281974	rbsD	MW0245	-	D-ribose pyranase
246	 38.44	+1	292958..293839	-	293	21281975	-	MW0246	-	hypothetical protein
247	 37.24	+1	294071..295069	-	332	21281976	-	MW0247	-	hypothetical protein
248	 16.67	-2	295287..295400	+	37	21281977	-	MW0248	-	truncated NADH dehydrogenase subunit
249	 26.72	-1	295450..295842	+	130	21281978	-	MW0249	-	hypothetical protein
250	 37.55	+1	295970..297346	-	458	21281979	-	MW0250	-	hypothetical protein
251	 35.85	0	297580..298572	+	330	21281980	-	MW0251	-	hypothetical protein
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.