IslandPath Analysis: Staphylococcus aureus subsp. aureus MW2



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 32.85   STD DEV: 3.41
Staphylococcus aureus subsp. aureus MW2, complete genome - 1..2820462
2632 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1302	 34.04	0	1420579..1421847	-	422	21283031	odhB	MW1302	-	dihydrolipoamide acetyltransferase
1303	 35.83	0	1421861..1424659	-	932	21283032	kgd	MW1303	-	alpha-ketoglutarate decarboxylase
1304	 29.20	-1	1424943..1426298	-	451	21283033	arlS	MW1304	-	putative protein histidine kinase ArlS
1305	 32.58	0	1426295..1426954	-	219	21283034	-	MW1305	-	truncated (putative response regulator ArlR
1306	 32.20	0	1427741..1428355	-	204	21283035	-	MW1306	-	hypothetical protein
1307	 29.97	0	1428372..1429442	-	356	21283036	murG	MW1307	-	N-acetylglucosaminyl transferase
1308	 33.73	0	1429454..1429963	-	169	21283037	-	MW1308	-	hypothetical protein
1309	 27.91	-1	1430664..1431050	+	128	21283038	tnp	MW1309	-	putative transposase
1310	 30.85	0	1431151..1432641	-	496	21283039	ctpA	MW1310	-	carboxy-terminal processing proteinase ctpA
1311	 33.78	0	1432833..1433054	-	73	21283040	-	MW1311	-	hypothetical protein
1312	 33.73	0	1433054..1433554	-	166	21283041	-	MW1312	-	PTS system glucose-specific enzyme II A component
1313	 31.93	0	1433566..1433994	-	142	21283042	-	MW1313	-	methionine sulfoxide reductase B
1314	 35.96	0	1433987..1434520	-	177	21283043	-	MW1314	-	methionine sulfoxide reductase A
1315	 31.55	0	1434606..1435445	-	279	21283044	-	MW1315	-	hypothetical protein
1316	 34.17	0	1435460..1435939	-	159	21283045	dfrA	MW1316	-	dihydrofolate reductase
1317	 33.54	0	1436139..1437095	-	318	21283046	thyA	MW1317	-	thymidylate synthase
1318	 36.99	+1	1437519..1437956	-	145	21283047	-	MW1318	-	hypothetical protein
1319	 34.84	0	1437972..1439096	-	374	21283048	-	MW1319	-	hypothetical protein
1320	 32.94	0	1439134..1439385	-	83	21283049	-	MW1320	-	hypothetical protein
1321	 30.50	0	1439836..1440540	+	234	21283050	-	MW1321	-	hypothetical protein
1322	 40.83	+2	1440587..1440706	+	39	21283051	-	MW1322	-	hypothetical protein
1323	 32.34	0	1441080..1441481	+	133	21283052	-	MW1323	-	hypothetical protein
1324	 36.00	0	1441540..1471254	-	9904	21283053	ebh	MW1324	-	hypothetical protein
1325	 32.90	0	1471652..1473043	-	463	21283054	-	MW1325	-	major facilitator transporter
1326	 34.62	0	1473200..1474522	-	440	21283055	-	MW1326	-	hypothetical protein
1327	 35.16	0	1474553..1475593	-	346	21283056	-	MW1327	-	threonine dehydratase
1328	 35.03	0	1475688..1476806	-	372	21283057	-	MW1328	-	alanine dehydrogenase
1329	 32.20	0	1477282..1478160	-	292	21283058	-	MW1329	-	hypothetical protein
1330	 30.37	0	1478180..1481620	-	1146	21283059	-	MW1330	-	hypothetical protein
1331	 32.66	0	1481924..1483264	+	446	21283060	-	MW1331	-	hypothetical protein
1332	 29.13	-1	1483893..1484225	-	110	21283061	-	MW1332	-	hypothetical protein
1333	 35.78	0	1484309..1485454	-	381	21283062	-	MW1333	-	hypothetical protein
1334	 35.04	0	1485888..1486004	-	38	21283063	-	MW1334	-	hypothetical protein
1335	 27.25	-1	1486105..1486449	-	114	21283064	-	MW1335	-	hypothetical protein
1336	 31.91	0	1486463..1487026	-	187	21283065	-	MW1336	-	hypothetical protein
1337	 29.06	-1	1487019..1487369	-	116	21283066	-	MW1337	-	hypothetical protein
1338	 21.67	-2	1487423..1487602	-	59	21283067	-	MW1338	-	hypothetical protein
1339	 32.06	0	1487908..1488534	+	208	21283068	recU	MW1339	-	Holliday junction-specific endonuclease
1340	 35.21	0	1488531..1490714	+	727	21283069	pbp2	MW1340	-	PBP2
1341	 27.49	-1	1491278..1491619	-	113	21283070	-	MW1341	-	hypothetical protein
1342	 34.39	0	1491624..1492283	-	219	21283071	nth	MW1342	-	endonuclease-like protein
1343	 30.71	0	1492273..1492959	-	228	21283072	-	MW1343	-	hypothetical protein
1344	 35.27	0	1493287..1494579	-	430	21283073	asnC	MW1344	-	asparaginyl-tRNA synthetase
1345	 30.07	0	1494901..1497594	-	897	21283074	dinG	MW1345	-	ATP-dependent DNA helicase dinG
1346	 30.56	0	1497618..1498589	-	323	21283075	-	MW1346	-	hypothetical protein
1347	 32.00	0	1498576..1499778	-	400	21283076	-	MW1347	-	tRNA CCA-pyrophosphorylase
1348	 33.07	0	1499783..1500925	-	380	21283077	-	MW1348	-	hypothetical protein
1349	 31.45	0	1501167..1501484	-	105	21283078	-	MW1349	-	hypothetical protein
1350	 36.91	+1	1501820..1502518	-	232	21283079	-	MW1350	-	hypothetical protein
1351	 29.59	0	1502572..1503159	-	195	21283080	-	MW1351	-	hypothetical protein
1352	 30.38	0	1503149..1503724	-	191	21283081	-	MW1352	-	hypothetical protein
1353	 31.08	0	1503738..1504982	-	414	21283082	-	MW1353	-	hypothetical protein
1354	 35.72	0	1504989..1506287	-	432	21283083	aroA	MW1354	-	3-phosphoshikimate 1-carboxyvinyltransferase
1355	 31.64	0	1506297..1507361	-	354	21283084	aroB	MW1355	-	3-dehydroquinate synthase
1356	 35.30	0	1507387..1508553	-	388	21283085	aroC	MW1356	-	chorismate synthase
1357	 20.90	-2	1508940..1509140	-	66	21283086	-	MW1357	-	hypothetical protein
1358	 33.78	0	1509350..1509799	-	149	21283087	ndk	MW1358	-	nucleoside diphosphate kinase
1359	 34.27	0	1509891..1510850	-	319	21283088	gerCC	MW1359	-	heptaprenyl diphosphate syntase component II
1360	 34.57	0	1510852..1511577	-	241	21283089	ubiE	MW1360	-	ubiquinone/menaquinone biosynthesis methyltransferase
1361	 27.57	-1	1511580..1512152	-	190	21283090	-	MW1361	-	hypothetical protein
1362	 36.63	+1	1512583..1512855	-	90	21283091	hu	MW1362	-	DNA-binding protein II
1363	 34.23	0	1513026..1514024	-	332	21283092	gpsA	MW1363	-	glycerol-3-phosphate dehydrogenase
1364	 35.24	0	1514041..1515351	-	436	21283093	engA	MW1364	-	GTP-binding protein EngA
1365	 33.84	0	1515573..1516748	-	391	21283094	rpsA	MW1365	-	30S ribosomal protein S1
1366	 34.70	0	1517446..1518105	-	219	21283095	cmk	MW1366	-	cytidylate kinase
1367	 34.78	0	1518182..1519150	+	322	21283096	ansA	MW1367	-	L-asparaginase
1368	 33.43	0	1519265..1520251	-	328	21283097	-	MW1368	-	hypothetical protein
1369	 36.69	+1	1520653..1522113	-	486	21283098	ebpS	MW1369	-	elastin binding protein
1370	 33.77	0	1522266..1523645	-	459	21283099	-	MW1370	-	ATP-dependent DNA helicase RecQ
1371	 28.20	-1	1523635..1524588	-	317	21283100	-	MW1371	-	hypothetical protein
1372	 38.55	+1	1524696..1524944	+	82	21283101	fer	MW1372	-	ferredoxin
1373	 31.50	0	1525050..1525595	-	181	21283102	-	MW1373	-	hypothetical protein
1374	 30.05	0	1526005..1526919	-	304	21283103	-	MW1374	-	hypothetical protein
1375	 31.26	0	1526976..1527893	-	305	21283104	-	MW1375	-	hypothetical protein
1376	 31.24	0	1527951..1528856	-	301	21283105	-	MW1376	-	hypothetical protein
1377	 34.41	0	1528947..1529132	-	61	21283106	-	MW1377	-	hypothetical protein
1378	 30.06	0	1529381..1530358	-	325	21283107	lukF	MW1378	-	Panton-Valentine leukocidin chain F precursor
1379	 31.10	0	1530360..1531298	-	312	21283108	lukS	MW1379	-	Panton-Valentine leukocidin chain S precursor
1380	 34.71	0	1531688..1533142	-	484	21283109	ytA	MW1380	-	truncated amidase
1381	 33.66	0	1533153..1533455	-	100	21283110	-	MW1381	-	holin
1382	 31.00	0	1533591..1533890	-	99	21283111	-	MW1382	-	hypothetical protein
1383	 28.48	-1	1533936..1534100	-	54	21283112	-	MW1383	-	hypothetical protein
1384	 31.54	0	1534093..1534482	-	129	21283113	-	MW1384	-	hypothetical protein
1385	 33.40	0	1534482..1535948	-	488	21283114	-	MW1385	-	hypothetical protein
1386	 35.48	0	1535948..1537858	-	636	21283115	-	MW1386	-	hypothetical protein
1387	 35.05	0	1537874..1538164	-	96	21283116	-	MW1387	-	hypothetical protein
1388	 30.43	0	1538164..1539747	-	527	21283117	-	MW1388	-	hypothetical protein
1389	 30.67	0	1539756..1540580	-	274	21283118	-	MW1389	-	hypothetical protein
1390	 36.27	+1	1540580..1546780	-	2066	21283119	-	MW1390	-	hypothetical protein
1391	 30.99	0	1547003..1547344	-	113	21283120	-	MW1391	-	hypothetical protein
1392	 36.84	+1	1547402..1547857	-	151	21283121	-	MW1392	-	major tail protein
1393	 36.60	+1	1547949..1548590	-	213	21283122	-	MW1393	-	major tail protein
1394	 28.54	-1	1548625..1549020	-	131	21283123	-	MW1394	-	hypothetical protein
1395	 33.58	0	1549021..1549422	-	133	21283124	-	MW1395	-	hypothetical protein
1396	 27.63	-1	1549419..1549751	-	110	21283125	-	MW1396	-	hypothetical protein
1397	 31.18	0	1549763..1550041	-	92	21283126	-	MW1397	-	hypothetical protein
1398	 32.82	0	1550110..1551273	-	387	21283127	-	MW1398	-	hypothetical protein
1399	 31.14	0	1551285..1552058	-	257	21283128	-	MW1399	-	protease
1400	 32.28	0	1552042..1553280	-	412	21283129	-	MW1400	-	portal protein
1401	 33.27	0	1553285..1554976	-	563	21283130	-	MW1401	-	terminase large subunit
32.85	MEAN

3.41	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.