IslandPath Analysis: Streptococcus agalactiae 2603V/R



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 35.44   STD DEV: 3.78
Streptococcus agalactiae 2603V/R, complete genome - 1..2160267
2124 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
2025	 43.51	+2	2057858..2058142	-	94	22538210	groES	SAG2075	-	co-chaperonin GroES
2026	 38.68	0	2058317..2059120	-	267	22538211	-	SAG2076	-	ABC transporter, ATP-binding protein
2027	 36.01	0	2059125..2060021	-	298	22538212	-	SAG2077	-	ABC transporter, permease protein
2028	 35.20	0	2060037..2060999	-	320	22538213	-	SAG2078	-	protein of unknown function/lipoprotein, putative
2029	 34.46	0	2061464..2062261	-	265	22538214	-	SAG2079	-	HAD superfamily hydrolase
2030	 34.49	0	2062447..2063307	+	286	22538215	-	SAG2080	-	glyoxalase family protein
2031	 32.38	0	2063350..2064081	+	243	22538216	-	SAG2081	-	hypothetical protein
2032	 37.06	0	2064438..2065055	-	205	22538217	nrdG	SAG2082	-	anaerobic ribonucleoside-triphosphate reductase activating protein
2033	 35.57	0	2065128..2065619	-	163	22538218	-	SAG2083	-	acetyltransferase
2034	 36.23	0	2065628..2066560	-	310	22538219	-	SAG2084	-	virulence factor MviM, putative
2035	 34.72	0	2066573..2066716	-	47	22538220	-	SAG2085	-	hypothetical protein
2036	 36.60	0	2066791..2068962	-	723	22538221	nrdD	SAG2086	-	anaerobic ribonucleoside triphosphate reductase
2037	 31.99	0	2069088..2070575	-	495	22538222	-	SAG2087	-	hypothetical protein
2038	 31.71	0	2070675..2070797	-	40	22538223	-	SAG2088	-	hypothetical protein
2039	 38.99	0	2070879..2071196	-	105	22538224	-	SAG2089	-	hypothetical protein
2040	 37.71	0	2071222..2071632	-	136	22538225	-	SAG2090	-	Holliday junction resolvase-like protein
2041	 33.71	0	2071641..2071907	-	88	22538226	-	SAG2091	-	hypothetical protein
2042	 32.33	0	2072109..2072507	-	132	22538227	spxA	SAG2092	-	transcriptional regulator Spx
2043	 39.65	+1	2072723..2073862	-	379	22538228	recA	SAG2093	-	recombinase A
2044	 34.78	0	2075285..2075836	-	183	22538229	tag	SAG2095	-	DNA-3-methyladenine glycosylase I
2045	 35.36	0	2075859..2076449	-	196	22538230	ruvA	SAG2096	-	Holliday junction DNA helicase motor protein
2046	 35.48	0	2076451..2077707	-	418	22538231	-	SAG2097	-	transporter, putative
2047	 35.71	0	2077715..2079694	-	659	22538232	mutL	SAG2098	-	DNA mismatch repair protein
2048	 23.53	-2	2079819..2079920	-	33	22538233	-	SAG2099	-	hypothetical protein
2049	 34.80	0	2079914..2080117	+	67	22538234	-	SAG2100	-	CSD family cold shock protein
2050	 37.76	0	2080174..2082750	-	858	22538235	hexA	SAG2101	-	DNA mismatch repair protein
2051	 35.39	0	2082807..2083244	-	145	22538236	-	SAG2102	-	arginine repressor ArgR, putative
2052	 38.12	0	2083466..2085157	+	563	22538237	argS	SAG2103	-	arginyl-tRNA synthetase
2053	 35.28	0	2085245..2085553	+	102	22538238	-	SAG2104	-	hypothetical protein
2054	 35.17	0	2085580..2086452	-	290	22538239	-	SAG2105	-	hypothetical protein
2055	 33.23	0	2086560..2087504	-	314	22538240	-	SAG2106	-	hypothetical protein
2056	 39.44	+1	2087494..2089245	-	583	22538241	aspS	SAG2107	-	aspartyl-tRNA synthetase
2057	 35.91	0	2089338..2090618	-	426	22538242	hisS	SAG2108	-	histidyl-tRNA synthetase
2058	 40.98	+1	2090838..2091020	+	60	22538243	rpmF	SAG2109	-	50S ribosomal protein L32
2059	 34.00	0	2091036..2091185	+	49	22538244	rpmG	SAG2110	-	50S ribosomal protein L33
2060	 36.21	0	2091333..2091854	-	173	22538245	-	SAG2111	-	hypothetical protein
2061	 40.67	+1	2091952..2093436	-	494	22538246	-	SAG2112	-	phage integrase family site specific recombinase
2062	 42.97	+1	2093446..2093694	-	82	22538247	-	SAG2113	-	hypothetical protein
2063	 41.50	+1	2093760..2094788	-	342	22538248	-	SAG2114	-	hypothetical protein
2064	 39.58	+1	2094791..2095222	-	143	22538249	-	SAG2115	-	hypothetical protein
2065	 38.16	0	2095498..2095953	-	151	22538250	-	SAG2116	-	hypothetical protein
2066	 40.28	+1	2095953..2096168	-	71	22538251	-	SAG2117	-	hypothetical protein
2067	 35.18	0	2096491..2097411	+	306	22538252	-	SAG2118	-	Cro/CI family transcriptional regulator
2068	 34.85	0	2097432..2098553	+	373	22538253	-	SAG2119	-	hypothetical protein
2069	 30.99	-1	2098781..2099590	+	269	22538254	-	SAG2120	-	hypothetical protein
2070	 30.51	-1	2100041..2100712	+	223	22538255	-	SAG2121	-	hypothetical protein
2071	 36.01	0	2100797..2101468	+	223	22538256	-	SAG2122	-	DNA-binding response regulator
2072	 32.89	0	2101452..2102816	+	454	22538257	-	SAG2123	-	sensor histidine kinase
2073	 36.16	0	2102926..2104479	-	517	22538258	-	SAG2124	-	hypothetical protein
2074	 37.22	0	2104573..2105499	-	308	22538259	arcC-1	SAG2125	-	carbamate kinase
2075	 37.64	0	2105511..2106509	-	332	22538260	argF-1	SAG2126	-	ornithine carbamoyltransferase
2076	 30.94	-1	2106612..2107907	+	431	22538261	-	SAG2127	-	sensor histidine kinase
2077	 29.74	-1	2107904..2108737	+	277	22538262	-	SAG2128	-	response regulator
2078	 38.59	0	2108959..2109681	+	240	22538263	-	SAG2129	-	amino acid ABC transporter, ATP-binding protein
2079	 34.92	0	2109684..2111198	+	504	22538264	-	SAG2130	-	amino acid ABC transporter, amino acid-binding protein/permease protein
2080	 34.16	0	2111277..2113820	-	847	22538265	-	SAG2131	-	hypothetical protein
2081	 34.54	0	2113801..2114544	-	247	22538266	-	SAG2132	-	hypothetical protein
2082	 29.69	-1	2114678..2115034	-	118	22538267	-	SAG2133	-	hypothetical protein
2083	 36.05	0	2115101..2117419	-	772	22538268	-	SAG2134	-	hypothetical protein
2084	 31.48	-1	2117558..2118097	+	179	22538269	-	SAG2135	-	TetR family transcriptional regulator
2085	 31.65	-1	2118183..2118479	-	98	22538270	-	SAG2136	-	hypothetical protein
2086	 40.52	+1	2118723..2119334	-	203	22538271	rpsD	SAG2137	-	30S ribosomal protein S4
2087	 34.38	0	2119664..2119951	-	95	22538272	-	SAG2138	-	hypothetical protein
2088	 37.46	0	2119963..2121318	-	451	22538273	dnaC-2	SAG2139	-	replicative DNA helicase
2089	 34.66	0	2121361..2121813	-	150	22538274	rplI	SAG2140	-	50S ribosomal protein L9
2090	 33.33	0	2121819..2123801	-	660	22538275	-	SAG2141	-	DHH family protein
2091	 38.22	0	2123868..2125709	-	613	22538276	gidA	SAG2142	-	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
2092	 34.31	0	2125938..2126549	-	203	22538277	-	SAG2143	-	hypothetical protein
2093	 37.25	0	2126581..2127702	-	373	22538278	trmU	SAG2144	-	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
2094	 34.38	0	2127948..2128616	+	222	22538279	sdhB	SAG2145	-	L-serine dehydratase, iron-sulfur-dependent, beta subunit
2095	 41.70	+1	2128631..2129503	+	290	22538280	sdhA	SAG2146	-	L-serine dehydratase, iron-sulfur-dependent, alpha subunit
2096	 40.28	+1	2129638..2130342	-	234	22538281	-	SAG2147	-	protein of unknown function/lipoprotein, putative
2097	 36.48	0	2130448..2130987	-	179	22538282	-	SAG2148	-	LysM domain-containing protein
2098	 34.59	0	2131203..2131997	-	264	22538283	-	SAG2149	-	cobalt transport family protein
2099	 35.82	0	2131990..2132832	-	280	22538284	-	SAG2150	-	cobalt transporter ATP-binding subunit
2100	 37.62	0	2132808..2133647	-	279	22538285	-	SAG2151	-	cobalt transporter ATP-binding subunit
2101	 34.25	0	2133647..2134189	-	180	22538286	pgsA	SAG2152	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
2102	 32.71	0	2134312..2135595	-	427	22538287	-	SAG2153	-	M16 family peptidase
2103	 30.44	-1	2135597..2136841	-	414	22538288	-	SAG2154	-	hypothetical protein
2104	 33.05	0	2137080..2137433	+	117	22538289	-	SAG2155	-	hypothetical protein
2105	 32.61	0	2137436..2138545	+	369	22538290	recF	SAG2156	-	recombination protein F
2106	 37.16	0	2138557..2139393	-	278	22538291	-	SAG2157	-	transporter, putative
2107	 29.71	-1	2139479..2140141	-	220	22538292	-	SAG2158	-	Cro/CI family transcriptional regulator
2108	 39.74	+1	2140216..2141697	-	493	22538293	guaB	SAG2159	-	inositol-5-monophosphate dehydrogenase
2109	 35.19	0	2141854..2142339	-	161	22538294	-	SAG2160	-	ArgR family transcriptional regulator
2110	 32.89	0	2142349..2143029	-	226	22538295	-	SAG2161	-	Crp/FNR family transcriptional regulator
2111	 33.05	0	2143237..2143941	+	234	22538296	-	SAG2162	-	hypothetical protein
2112	 37.15	0	2144208..2145440	+	410	22538297	arcA	SAG2163	-	arginine deiminase
2113	 35.52	0	2145467..2145877	+	136	22538298	-	SAG2164	-	acetyltransferase
2114	 38.46	0	2145893..2146906	+	337	22538299	argF-2	SAG2165	-	ornithine carbamoyltransferase
2115	 35.29	0	2146969..2148396	+	475	22538300	arcD	SAG2166	-	arginine/ornithine antiporter
2116	 37.41	0	2148417..2149373	+	318	22538301	arcC-2	SAG2167	-	carbamate kinase
2117	 35.28	0	2149483..2150508	-	341	22538302	trpS	SAG2168	-	tryptophanyl-tRNA synthetase II
2118	 32.18	0	2150616..2151308	-	230	22538303	-	SAG2169	-	hypothetical protein
2119	 34.94	0	2151552..2152424	+	290	22538304	-	SAG2170	-	hypothetical protein
2120	 36.17	0	2152490..2154109	+	539	22538305	-	SAG2171	-	ABC transporter, ATP-binding protein
2121	 30.16	-1	2154232..2156811	+	859	22538306	-	SAG2172	-	hypothetical protein
2122	 32.50	0	2157390..2157869	-	159	22538307	-	SAG2173	-	SPOUT methyltransferase superfamily protein
2123	 35.37	0	2158070..2159299	+	409	22538308	-	SAG2174	-	serine protease
2124	 34.24	0	2159397..2160170	+	257	22538309	-	SAG2175	-	ParB family partitioning protein
35.44	MEAN

3.78	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.