version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 641 74.32 0 915516..916391 + 291 162448910 - sce0640 - hypothetical protein 642 73.91 0 916388..917629 + 413 162448911 - sce0641 - hypothetical protein 643 70.26 0 917666..918166 - 166 162448912 ychJ sce0642 - hypothetical protein 644 66.45 -1 918411..918878 + 155 162448913 - sce0643 - hypothetical protein 645 67.47 0 919034..921142 + 702 162448914 fusA1 sce0644 - elongation factor G 646 70.39 0 921153..922469 + 438 162448915 - sce0645 - hypothetical protein 647 65.64 -1 922573..923058 - 161 162448916 - sce0646 - hypothetical protein 648 78.35 +1 923402..924445 + 347 162448917 - sce0647 - hypothetical protein 649 70.41 0 924610..925197 + 195 162448918 - sce0648 - ompA-family exported protein 650 71.26 0 925348..926088 + 246 162448919 tolQ1 sce0649 - putative transport transmembrane protein, tolQ 651 73.49 0 926110..926607 + 165 162448920 tolR1 sce0650 - putative transport transmembrane protein 652 73.17 0 926604..927464 + 286 162448921 - sce0651 - putative tonB-like protein 653 71.01 0 927455..928789 + 444 162448922 tolB sce0652 - tolB protein 654 71.55 0 929114..929686 + 190 162448923 - sce0653 - hypothetical protein 655 70.47 0 930102..930680 + 192 162448924 - sce0654 - hypothetical protein 656 69.92 0 930870..932561 - 563 162448925 - sce0655 - protein kinase 657 75.97 +1 932845..933672 - 275 162448926 thiD sce0656 - phosphomethylpyrimidine kinase 658 70.34 0 933933..935156 - 407 162448927 - sce0657 - hypothetical protein 659 66.26 -1 935239..935481 - 80 162448928 - sce0658 - hypothetical protein 660 73.16 0 935664..936449 + 261 162448929 natA sce0659 - sodium ABC transporter ATP-binding protein 661 73.50 0 936456..938651 + 731 162448930 - sce0660 - putative ABC transporter sodium permease 662 69.80 0 938734..940677 - 647 162448931 - sce0661 - Mannan endo-1,4-beta-mannosidase 663 74.12 0 940859..941878 - 339 162448932 - sce0662 - LacI family transcription regulator 664 68.02 0 942170..943354 - 394 162448933 serB sce0663 - hypothetical protein 665 68.70 0 943762..945921 - 719 162448934 uvrB sce0664 - excinuclease ABC subunit B 666 70.17 0 946788..947900 + 370 162448935 - sce0665 - hypothetical protein 667 70.93 0 948286..950232 - 648 162448936 - sce0666 - sigma-54 dependent transcriptional regulator 668 68.72 0 950505..952259 - 584 162448937 - sce0667 - putative secreted protein 669 73.55 0 952480..953322 - 280 162448938 - sce0668 - putative oxidoreductase 670 69.71 0 953460..954608 - 382 162448939 soxB sce0669 - sarcosine oxidase, beta subunit 671 74.76 0 954615..955442 - 275 162448940 cysQ sce0670 - inositol monophosphatase family protein CysQ 672 72.19 0 955448..956425 - 325 162448941 - sce0671 - oxidoreductase/voltage-gated potassium channel beta-1 subunit (K+ channel beta-1 subunit) (Kv-beta-1) 673 74.92 0 956751..957356 + 201 162448942 - sce0672 - hypothetical protein 674 66.21 -1 957450..958547 + 365 162448943 - sce0673 - pectinacetylesterase, putative 675 66.96 0 958796..959488 + 230 162448944 ppgK sce0674 - polyphosphate-glucose phosphotransferase 676 69.61 0 959757..961046 + 429 162448945 - sce0675 - cytochrome P450 CYP267A1 677 72.04 0 961287..962756 - 489 162448946 astD sce0676 - succinylglutamic semialdehyde dehydrogenase 678 72.09 0 963273..964838 + 521 162448947 - sce0677 - hypothetical protein 679 66.78 -1 964851..965726 - 291 162448948 - sce0678 - hypothetical protein 680 74.13 0 966002..966202 - 66 162448949 - sce0679 - none 681 77.83 +1 966344..967687 - 447 162448950 - sce0680 - hypothetical protein 682 75.27 +1 967684..968241 - 185 162448951 - sce0681 - ECF family RNA polymerase sigma factor 683 76.76 +1 968480..971065 + 861 162448952 - sce0682 - protein kinase 684 65.75 -1 971157..971813 - 218 162448953 - sce0683 - hypothetical protein 685 66.84 -1 971930..972496 - 188 162448954 - sce0684 - hypothetical protein 686 70.10 0 972863..973387 + 174 162448955 - sce0685 - hypothetical protein 687 76.47 +1 973410..974888 - 492 162448956 - sce0686 - sigma-54 dependent transcriptional regulator 688 74.61 0 974945..978859 - 1304 162448957 - sce0687 - protein kinase 689 73.05 0 979641..983165 - 1174 162448958 - sce0688 - endonuclease/exonuclease/phosphatase family protein 690 67.34 0 983613..985106 + 497 162448959 - sce0689 - hypothetical protein 691 71.45 0 985125..985961 + 278 162448960 - sce0690 - Fatty acid desaturase 692 68.97 0 985963..986397 + 144 162448961 - sce0691 - hypothetical protein 693 71.93 0 986477..986932 - 151 162448962 - sce0692 - hypothetical protein 694 71.96 0 987014..988297 - 427 162448963 bioA sce0693 - adenosylmethionine--8-amino-7-oxononanoate transaminase 695 69.61 0 988602..989450 + 282 162448964 - sce0694 - hydrolase, alpha/beta fold family protein 696 72.13 0 989533..990282 + 249 162448965 - sce0695 - ECF family RNA polymerase sigma factor 697 67.49 0 990289..990531 + 80 162448966 - sce0696 - hypothetical protein 698 65.78 -1 990766..991218 - 150 162448967 - sce0697 - hypothetical protein 699 62.18 -2 992108..992419 - 103 162448968 - sce0698 - hypothetical protein 700 66.57 -1 993061..996048 + 995 162448969 - sce0699 - hypothetical protein 701 76.96 +1 997413..999287 - 624 162448970 deaD1 sce0700 - ATP-independent RNA helicase 702 77.18 +1 999385..999831 - 148 162448971 - sce0701 - hypothetical protein 703 71.69 0 1000200..1001771 + 523 162448972 - sce0702 - dipeptidase 704 75.55 +1 1001825..1004098 + 757 162448973 - sce0703 - hypothetical protein 705 71.05 0 1004212..1004850 + 212 162448974 marC sce0704 - MarC family integral membrane protein 706 70.17 0 1004888..1005544 - 218 162448975 - sce0705 - anti-anti sigma factor protein 707 62.75 -2 1005534..1005941 - 135 162448976 - sce0706 - hypothetical protein 708 76.79 +1 1006180..1007088 - 302 162448977 - sce0707 - hypothetical protein 709 69.96 0 1007085..1007540 - 151 162448978 - sce0708 - phenazine biosynthesis protein 710 79.62 +2 1007695..1008636 + 313 162448979 - sce0709 - AraC family transcriptional regulator 711 69.78 0 1008770..1010470 + 566 162448980 - sce0710 - hypothetical protein 712 70.15 0 1010565..1011167 + 200 162448981 - sce0711 - hypothetical protein 713 67.44 0 1011379..1012419 + 346 162448982 - sce0712 - ArsR family transcriptional regulator 714 71.53 0 1012567..1016490 + 1307 162448983 - sce0713 - two-component hybrid sensor and regulator 715 67.48 0 1016597..1017331 + 244 162448984 - sce0714 - hypothetical protein 716 70.71 0 1017555..1018592 + 345 162448985 - sce0715 - oxidoreductase 717 72.58 0 1018730..1020031 + 433 162448986 - sce0716 - hypothetical protein 718 64.78 -1 1020086..1020562 - 158 162448987 - sce0717 - hypothetical protein 719 72.26 0 1020859..1021251 + 130 162448988 - sce0718 - hypothetical protein 720 52.63 -2 1021395..1021508 - 37 162448989 - sce0719 - hypothetical protein 721 67.94 0 1021647..1022828 - 393 162448990 - sce0720 - hypothetical protein 722 70.94 0 1023378..1023728 - 116 162448991 - sce0721 - hypothetical protein 723 75.31 +1 1023852..1024175 - 107 162448992 - sce0722 - hypothetical protein 724 73.26 0 1024469..1026379 + 636 162448993 - sce0723 - two-component hybrid sensor and regulator 725 72.76 0 1026484..1027041 - 185 162448994 - sce0724 - hypothetical protein 726 64.69 -1 1027441..1027947 + 168 162448995 - sce0725 - hypothetical protein 727 70.61 0 1028331..1028837 - 168 162448996 - sce0726 - hypothetical protein 728 56.03 -2 1028846..1028986 - 46 162448997 - sce0727 - hypothetical protein 729 63.10 -1 1029053..1029724 - 223 162448998 - sce0728 - hypothetical protein 730 66.36 -1 1030462..1031781 + 439 162448999 - sce0729 - reverse transcriptase/maturase family protein 731 67.71 0 1031887..1033032 + 381 162449000 - sce0730 - hypothetical protein 732 73.24 0 1033082..1033933 - 283 162449001 - sce0731 - hypothetical protein 733 77.49 +1 1033984..1034898 + 304 162449002 - sce0732 - AraC family transcriptional regulator 734 75.70 +1 1034968..1035432 - 154 162449003 - sce0733 - hypothetical protein 735 66.73 -1 1035422..1037128 - 568 162449004 - sce0734 - hypothetical protein 736 68.90 0 1037450..1039195 + 581 162449005 - sce0735 - hypothetical protein 737 66.96 0 1039192..1040556 + 454 162449006 - sce0736 - signal peptide 738 69.90 0 1040791..1041564 + 257 162449007 - sce0737 - anti-anti sigma factor protein 739 70.53 0 1041536..1042234 + 232 162449008 - sce0738 - cupin-like protein 740 68.13 0 1042470..1043360 - 296 162449009 - sce0739 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.