version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 512 79.18 +1 721927..724323 - 798 162448781 - sce0511 - hypothetical protein 513 74.63 0 724325..726736 - 803 162448782 - sce0512 - hypothetical protein 514 73.22 0 727173..729734 + 853 162448783 - sce0513 - disulfide bond formation protein D precursor 515 72.56 0 729918..730664 - 248 162448784 - sce0514 - hypothetical protein 516 73.27 0 731079..731744 + 221 162448785 - sce0515 - hypothetical protein 517 71.75 0 731757..733448 + 563 162448786 - sce0516 - two-component sensor histidine kinase 518 77.63 +1 733445..734548 + 367 162448787 - sce0517 - hypothetical protein 519 72.33 0 735368..736567 + 399 162448788 - sce0518 - lipase 520 70.38 0 736702..739611 + 969 162448789 - sce0519 - putative secreted protein 521 70.03 0 739849..742377 + 842 162448790 - sce0520 - hypothetical protein 522 72.19 0 742749..743870 + 373 162448791 - sce0521 - hypothetical protein 523 63.31 -1 744131..744487 + 118 162448792 nuoA1 sce0522 - NADH dehydrogenase (ubiquinone) 524 69.57 0 744475..745059 + 194 162448793 nuoB1 sce0523 - NADH dehydrogenase (ubiquinone) 525 69.57 0 745056..745709 + 217 162448794 nuoC1 sce0524 - NADH dehydrogenase (ubiquinone) 526 67.33 0 745713..746927 + 404 162448795 nuoD1 sce0525 - NADH dehydrogenase (ubiquinone) 527 72.34 0 747007..748698 + 563 162448796 nuoG sce0526 - NADH dehydrogenase (ubiquinone) 528 69.50 0 748695..750461 + 588 162448797 nuoH sce0527 - NADH dehydrogenase (ubiquinone) 529 69.78 0 750473..751147 + 224 162448798 nuoI sce0528 - NADH dehydrogenase I chain I 530 70.92 0 751347..752804 + 485 162448799 gatB sce0529 - glutamyl-tRNA(Gln) amidotransferase, B subunit 531 71.87 0 752946..753791 + 281 162448800 - sce0530 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 532 73.40 0 753843..757301 + 1152 162448801 - sce0531 - hypothetical protein 533 67.57 0 757853..759076 - 407 162448802 - sce0532 - putative peptidase 534 67.47 0 759441..760433 - 330 162448803 - sce0533 - putative secreted trypsin-like serine protease 535 65.80 -1 760445..762517 - 690 162448804 - sce0534 - hypothetical protein 536 64.72 -1 762723..763184 - 153 162448805 - sce0535 - hypothetical protein 537 69.68 0 763234..764130 - 298 162448806 - sce0536 - hypothetical protein 538 66.74 -1 764186..765637 - 483 162448807 - sce0537 - hypothetical protein 539 72.21 0 766404..769832 + 1142 162448808 - sce0538 - protein kinase 540 63.98 -1 769882..770589 + 235 162448809 - sce0539 - hypothetical protein 541 70.43 0 770586..771860 + 424 162448810 - sce0540 - hypothetical protein 542 71.13 0 771857..772954 + 365 162448811 - sce0541 - hypothetical protein 543 65.55 -1 773019..774812 - 597 162448812 - sce0542 - peptidase 544 71.58 0 774966..776735 + 589 162448813 - sce0543 - sigma-54 dependent transcriptional regulator 545 75.89 +1 777107..778201 - 364 162448814 - sce0544 - hypothetical protein 546 71.10 0 778198..779460 - 420 162448815 - sce0545 - helicase, putative 547 68.50 0 779473..779745 + 90 162448816 - sce0546 - hypothetical protein 548 69.62 0 779757..780773 + 338 162448817 - sce0547 - cation efflux system protein 549 69.08 0 780770..781348 + 192 162448818 yebN sce0548 - hypothetical protein 550 74.21 0 781428..782780 - 450 162448819 glgA1 sce0549 - glycogen synthase 551 71.64 0 783249..785801 - 850 162448820 - sce0550 - hypothetical protein 552 69.03 0 785995..791664 + 1889 162448821 - sce0551 - NHL repeat-containing protein 553 67.97 0 791857..793548 + 563 162448822 - sce0552 - putative secreted protein 554 71.87 0 793644..794642 - 332 162448823 - sce0553 - AraC family transcriptional regulator 555 67.60 0 794784..796175 - 463 162448824 - sce0554 - putative secreted protein 556 69.93 0 796172..797917 - 581 162448825 - sce0555 - signal peptide 557 69.07 0 798079..798786 - 235 162448826 - sce0556 - putative secreted protein 558 76.57 +1 798783..799529 - 248 162448827 - sce0557 - hypothetical protein 559 68.50 0 799529..800074 - 181 162448828 - sce0558 - ECF family RNA polymerase sigma factor 560 74.47 0 800089..801267 + 392 162448829 - sce0559 - hypothetical protein 561 70.45 0 802099..802839 - 246 162448830 ygcH sce0560 - hypothetical protein 562 67.40 0 803516..803923 + 135 162448831 - sce0561 - hypothetical protein 563 67.85 0 805619..806209 + 196 162448832 - sce0562 - hypothetical protein 564 73.17 0 806922..807290 + 122 162448833 - sce0563 - hypothetical protein 565 73.14 0 807371..808513 + 380 162448834 ddlA1 sce0564 - D-alanine-D-alanine ligase 566 78.63 +1 808676..809770 - 364 162448835 - sce0565 - hypothetical protein 567 75.43 +1 809921..810673 - 250 162448836 - sce0566 - hypothetical protein 568 75.00 0 810774..813125 + 783 162448837 - sce0567 - uvrD/Rep helicase family protein 569 73.68 0 814126..816108 + 660 162448838 - sce0568 - hemoglobin 570 68.74 0 816217..818097 + 626 162448839 - sce0569 - protein kinase 571 67.44 0 818198..818971 - 257 162448840 - sce0570 - hypothetical protein 572 72.92 0 819277..820683 - 468 162448841 - sce0571 - major facilitator superfamily permease 573 78.32 +1 821039..821965 - 308 162448842 gltX1 sce0572 - hypothetical protein 574 68.39 0 822033..823829 - 598 162448843 gltX2 sce0573 - hypothetical protein 575 70.20 0 823987..825912 - 641 162448844 cyaX sce0574 - putative adenylate cyclase 576 64.89 -1 826097..826882 + 261 162448845 - sce0575 - hypothetical protein 577 69.51 0 827104..827490 - 128 162448846 - sce0576 - low molecular weight heat shock protein 578 66.88 -1 827602..828066 - 154 162448847 - sce0577 - HSP20 family protein 579 70.79 0 828578..829159 + 193 162448848 - sce0578 - hypothetical protein 580 75.85 +1 829194..830108 - 304 162448849 - sce0579 - MerR family transcriptional regulator 581 72.98 0 830367..831902 + 511 162448850 crtI1 sce0580 - phytoene dehydrogenase 582 77.85 +1 831883..832839 + 318 162448851 crtB sce0581 - phytoene synthase 583 78.44 +1 832906..834375 + 489 162448852 - sce0582 - hypothetical protein 584 76.22 +1 834400..834891 - 163 162448853 crtZ sce0583 - Beta-carotene hydroxylase 585 75.93 +1 834888..835772 - 294 162448854 crtC sce0584 - hydroxyneurosporene dehydrogenase 586 74.97 0 835769..837322 - 517 162448855 crtD sce0585 - putative methoxyneurosporene dehydrogenase 587 75.44 +1 837445..838356 + 303 162448856 crtE sce0586 - farnesyltranstransferase 588 76.06 +1 838800..840566 + 588 162448857 - sce0587 - acyl-CoA dehydrogenase 589 72.08 0 840859..841947 + 362 162448858 - sce0588 - MaoC family protein 590 74.16 0 842203..844338 + 711 162448859 - sce0589 - two-component hybrid sensor and regulator 591 70.15 0 844508..845053 + 181 162448860 - sce0590 - hypothetical protein 592 67.56 0 845054..846511 - 485 162448861 - sce0591 - SAM-dependent methyltransferases 593 78.02 +1 846772..847863 - 363 162448862 - sce0592 - hypothetical protein 594 72.84 0 847867..849081 - 404 162448863 - sce0593 - cell wall surface anchor family protein 595 76.83 +1 849156..850001 - 281 162448864 rbsK sce0594 - ribokinase 596 72.40 0 850037..852007 - 656 162448865 - sce0595 - hypothetical protein 597 74.07 0 852265..853074 + 269 162448866 - sce0596 - Sir2 family transcriptional regulator 598 64.58 -1 853217..853456 + 79 162448867 - sce0597 - hypothetical protein 599 73.03 0 853484..854395 - 303 162448868 - sce0598 - 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase 600 71.72 0 854526..855395 + 289 162448869 bcpA sce0599 - carboxyvinyl-carboxyphosphonate phosphorylmutase 601 73.69 0 855406..856587 + 393 162448870 - sce0600 - putative hydroxylase 602 68.92 0 856710..857330 - 206 162448871 - sce0601 - glutathione S-transferase 603 69.23 0 857356..858057 - 233 162448872 gst2 sce0602 - hypothetical protein 604 71.65 0 858809..859390 + 193 162448873 rimJ2 sce0603 - acetyltransferase 605 73.98 0 859497..859988 - 163 162448874 - sce0604 - putative acteyltransferase 606 75.26 +1 860026..864378 - 1450 162448875 - sce0605 - hypothetical protein 607 74.97 0 864450..865340 + 296 162448876 - sce0606 - hypothetical protein 608 67.34 0 865397..865693 + 98 162448877 - sce0607 - hypothetical protein 609 76.17 +1 865838..870739 + 1633 162448878 - sce0608 - hypothetical protein 610 77.29 +1 870736..876738 + 2000 162448879 - sce0609 - hypothetical protein 611 68.02 0 876735..877178 + 147 162448880 - sce0610 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.