version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 432 76.84 +1 623237..627196 - 1319 162448701 - sce0431 - protein kinase 433 68.95 0 627663..628187 + 174 162448702 - sce0432 - hypothetical protein 434 72.39 0 628421..629695 + 424 162448703 - sce0433 - hypothetical protein 435 76.02 +1 629775..631313 + 512 162448704 - sce0434 - GntR family transcriptional regulator 436 66.67 -1 631622..632089 + 155 162448705 - sce0435 - hypothetical protein 437 77.47 +1 632350..633858 - 502 162448706 - sce0436 - AMP-dependent synthetase and ligase 438 68.89 0 633869..634138 - 89 162448707 - sce0437 - Acyl carrier protein-like 439 65.80 -1 634173..635558 - 461 162448708 - sce0438 - cystathionine beta-synthase 440 72.73 0 635942..637309 + 455 162448709 - sce0439 - transcriptional regulator 441 65.33 -1 637441..637740 - 99 162448710 - sce0440 - hypothetical protein 442 64.81 -1 638271..638432 + 53 162448711 - sce0441 - hypothetical protein 443 68.97 0 638832..640046 + 404 162448712 - sce0442 - Serine-pyruvate aminotransferase 444 74.58 0 640043..641875 - 610 162448713 eriC sce0443 - chloride channel 445 76.54 +1 641937..642503 - 188 162448714 - sce0444 - MarR family transcriptional regulator 446 67.93 0 642746..643693 + 315 162448715 glyQ sce0445 - glycyl-tRNA synthetase subunit alpha 447 74.61 0 643805..644383 - 192 162448716 pyrE sce0446 - putative orotate phosphoribosyltransferase 448 81.51 +2 644380..645093 - 237 162448717 - sce0447 - hypothetical protein 449 68.57 0 645097..645411 - 104 162448718 - sce0448 - hypothetical protein 450 73.89 0 645466..645894 - 142 162448719 - sce0449 - hypothetical protein 451 70.40 0 646537..647901 + 454 162448720 - sce0450 - putative oxidoreductase 452 71.45 0 648022..648753 - 243 162448721 - sce0451 - hypothetical protein 453 64.30 -1 648800..649348 - 182 162448722 - sce0452 - hypothetical protein 454 75.76 +1 649421..650047 - 208 162448723 - sce0453 - DNA repair protein 455 74.62 0 650044..650697 - 217 162448724 - sce0454 - hypothetical protein 456 69.18 0 650866..651144 + 92 162448725 - sce0455 - Cro/CI family transcriptional regulator 457 66.25 -1 651516..652466 - 316 162448726 - sce0456 - integrase/recombinase 458 60.63 -2 653002..653382 + 126 162448727 - sce0457 - hypothetical protein 459 59.06 -2 653495..653836 + 113 162448728 - sce0458 - hypothetical protein 460 61.75 -2 654432..655286 + 284 162448729 - sce0459 - hypothetical protein 461 72.78 0 655505..656617 + 370 162448730 - sce0460 - hypothetical protein 462 67.14 0 657630..658052 + 140 162448731 - sce0461 - hypothetical protein 463 62.70 -2 658042..658470 + 142 162448732 - sce0462 - hypothetical protein 464 71.05 0 658672..659538 - 288 162448733 - sce0463 - hypothetical protein 465 59.24 -2 660517..661014 + 165 162448734 - sce0464 - hypothetical protein 466 66.09 -1 661030..661893 + 287 162448735 - sce0465 - hypothetical protein 467 60.03 -2 661904..662551 - 215 162448736 - sce0466 - putative secreted protein 468 64.75 -1 662563..663240 - 225 162448737 - sce0467 - putative membrane associated protein 469 77.00 +1 663249..666374 - 1041 162448738 - sce0468 - hypothetical protein 470 73.02 0 666769..667917 + 382 162448739 - sce0469 - protein kinase 471 70.62 0 667985..668617 + 210 162448740 - sce0470 - hypothetical protein 472 70.15 0 668709..670547 - 612 162448741 - sce0471 - hypothetical protein 473 65.70 -1 670790..671305 + 171 162448742 - sce0472 - hypothetical protein 474 75.25 +1 671371..672861 - 496 162448743 - sce0473 - hypothetical protein 475 77.03 +1 673430..674317 - 295 162448744 - sce0474 - hypothetical protein 476 68.65 0 674649..675806 + 385 162448745 adh1 sce0475 - alcohol dehydrogenase 477 71.52 0 676154..676627 + 157 162448746 - sce0476 - hypothetical protein 478 74.07 0 676691..677716 + 341 162448747 - sce0477 - hypothetical protein 479 72.41 0 677728..679293 + 521 162448748 yfbK sce0478 - hypothetical protein 480 68.65 0 679557..680414 + 285 162448749 - sce0479 - hypothetical protein 481 72.19 0 680425..681330 + 301 162448750 - sce0480 - hypothetical protein 482 78.06 +1 681396..682826 - 476 162448751 - sce0481 - hypothetical protein 483 79.42 +2 682993..685611 + 872 162448752 - sce0482 - hypothetical protein 484 79.40 +2 685655..686455 + 266 162448753 - sce0483 - hypothetical protein 485 79.17 +1 686502..687581 - 359 162448754 - sce0484 - hypothetical protein 486 74.64 0 687866..689257 + 463 162448755 - sce0485 - hypothetical protein 487 77.13 +1 689276..690250 - 324 162448756 - sce0486 - hypothetical protein 488 70.59 0 690730..692436 + 568 162448757 - sce0487 - protein kinase 489 72.74 0 692536..694725 + 729 162448758 otsA sce0488 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) 490 69.71 0 694742..696583 - 613 162448759 - sce0489 - hypothetical protein 491 75.40 +1 696792..697409 + 205 162448760 - sce0490 - hypothetical protein 492 70.49 0 697601..698935 + 444 162448761 mgtE1 sce0491 - Mg2+ transporter 493 65.36 -1 699935..700240 + 101 162448762 - sce0492 - hypothetical protein 494 70.60 0 700364..701101 + 245 162448763 - sce0493 - phosphoglycerate mutase 495 67.00 0 701207..702100 + 297 162448764 purU sce0494 - formyltetrahydrofolate deformylase 496 73.37 0 702226..702777 - 183 162448765 - sce0495 - hypothetical protein 497 65.66 -1 703434..704126 - 230 162448766 - sce0496 - putative glutathione transferase 498 78.06 +1 704295..705224 - 309 162448767 - sce0497 - putative homocysteine S-methyltransferase family protein 499 66.34 -1 705584..706204 + 206 162448768 - sce0498 - hypothetical protein 500 70.59 0 706252..707856 + 534 162448769 - sce0499 - protease 501 77.04 +1 707880..708824 + 314 162448770 - sce0500 - hypothetical protein 502 75.56 +1 708948..710522 + 524 162448771 - sce0501 - hypothetical protein 503 77.40 +1 711069..712550 + 493 162448772 copB sce0502 - copper tolerance protein 504 71.69 0 712552..713886 + 444 162448773 copA sce0503 - multicopper oxidase 505 75.33 +1 714127..714738 + 203 162448774 - sce0504 - hypothetical protein 506 67.99 0 714783..715388 - 201 162448775 - sce0505 - hypothetical protein 507 74.74 0 715471..716808 - 445 162448776 - sce0506 - putative integral membrane protein 508 76.18 +1 716867..718978 - 703 162448777 - sce0507 - hypothetical protein 509 80.22 +2 719021..720127 - 368 162448778 - sce0508 - hypothetical protein 510 68.62 0 720060..721289 - 409 162448779 tyrS sce0509 - hypothetical protein 511 66.38 -1 721448..721792 - 114 162448780 ihfB sce0510 - integration host factor beta-subunit 512 79.18 +1 721927..724323 - 798 162448781 - sce0511 - hypothetical protein 513 74.63 0 724325..726736 - 803 162448782 - sce0512 - hypothetical protein 514 73.22 0 727173..729734 + 853 162448783 - sce0513 - disulfide bond formation protein D precursor 515 72.56 0 729918..730664 - 248 162448784 - sce0514 - hypothetical protein 516 73.27 0 731079..731744 + 221 162448785 - sce0515 - hypothetical protein 517 71.75 0 731757..733448 + 563 162448786 - sce0516 - two-component sensor histidine kinase 518 77.63 +1 733445..734548 + 367 162448787 - sce0517 - hypothetical protein 519 72.33 0 735368..736567 + 399 162448788 - sce0518 - lipase 520 70.38 0 736702..739611 + 969 162448789 - sce0519 - putative secreted protein 521 70.03 0 739849..742377 + 842 162448790 - sce0520 - hypothetical protein 522 72.19 0 742749..743870 + 373 162448791 - sce0521 - hypothetical protein 523 63.31 -1 744131..744487 + 118 162448792 nuoA1 sce0522 - NADH dehydrogenase (ubiquinone) 524 69.57 0 744475..745059 + 194 162448793 nuoB1 sce0523 - NADH dehydrogenase (ubiquinone) 525 69.57 0 745056..745709 + 217 162448794 nuoC1 sce0524 - NADH dehydrogenase (ubiquinone) 526 67.33 0 745713..746927 + 404 162448795 nuoD1 sce0525 - NADH dehydrogenase (ubiquinone) 527 72.34 0 747007..748698 + 563 162448796 nuoG sce0526 - NADH dehydrogenase (ubiquinone) 528 69.50 0 748695..750461 + 588 162448797 nuoH sce0527 - NADH dehydrogenase (ubiquinone) 529 69.78 0 750473..751147 + 224 162448798 nuoI sce0528 - NADH dehydrogenase I chain I 530 70.92 0 751347..752804 + 485 162448799 gatB sce0529 - glutamyl-tRNA(Gln) amidotransferase, B subunit 531 71.87 0 752946..753791 + 281 162448800 - sce0530 - 1-acyl-sn-glycerol-3-phosphate acyltransferase 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.