version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 404 64.33 -1 582802..582972 + 56 162448673 rpmG1 sce0403 - hypothetical protein 405 67.17 0 583393..583791 + 132 162448674 secE sce0404 - preprotein translocase, SecE subunit 406 62.15 -2 583822..584352 + 176 162448675 nusG sce0405 - transcription antitermination protein NusG 407 64.41 -1 584470..584913 + 147 162448676 rplK sce0406 - 50S ribosomal protein L11 408 67.37 0 585059..585769 + 236 162448677 rplA sce0407 - hypothetical protein 409 63.47 -1 585773..586303 + 176 162448678 rplJ sce0408 - 50S ribosomal protein L10 410 65.63 -1 586402..586788 + 128 162448679 rplL sce0409 - 50S ribosomal protein L7/L12 411 66.13 -1 587152..591288 + 1378 162448680 rpoB sce0410 - DNA-directed RNA polymerase 412 67.27 0 591430..595713 + 1427 162448681 rpoC sce0411 - DNA-directed RNA polymerase, beta' subunit 413 70.96 0 596110..598392 + 760 162448682 - sce0412 - response regulator 414 72.70 0 598414..599043 + 209 162448683 rimJ1 sce0413 - ribosomal-protein-alanine N-acetyltransferase 415 71.52 0 599251..600198 + 315 162448684 panB sce0414 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 416 79.06 +1 600311..602440 - 709 162448685 - sce0415 - hypothetical protein 417 76.35 +1 602437..603396 - 319 162448686 - sce0416 - hypothetical protein 418 73.01 0 603652..605511 + 619 162448687 - sce0417 - putative membrane bound zinc metallopeptidase 419 71.93 0 605515..606996 - 493 162448688 - sce0418 - hypothetical protein 420 72.50 0 607066..608334 - 422 162448689 - sce0419 - protein kinase 421 74.74 0 608331..609308 - 325 162448690 - sce0420 - hypothetical protein 422 74.62 0 609417..610472 + 351 162448691 - sce0421 - outer membrane protein 423 68.55 0 610515..611525 - 336 162448692 - sce0422 - hypothetical protein 424 76.11 +1 612591..614126 - 511 162448693 - sce0423 - hypothetical protein 425 72.09 0 614119..615777 - 552 162448694 - sce0424 - hypothetical protein 426 71.98 0 615998..617221 + 407 162448695 - sce0425 - hypothetical protein 427 70.55 0 617255..617692 + 145 162448696 - sce0426 - rhodanese-like domain-containing protein 428 73.98 0 617788..618498 + 236 162448697 - sce0427 - glycosyltransferase 429 72.15 0 618706..620928 + 740 162448698 - sce0428 - histidine kinase 430 69.92 0 620925..621293 + 122 162448699 - sce0429 - two-component response regulator 431 68.86 0 621281..622282 - 333 162448700 - sce0430 - hypothetical protein 432 76.84 +1 623237..627196 - 1319 162448701 - sce0431 - protein kinase 433 68.95 0 627663..628187 + 174 162448702 - sce0432 - hypothetical protein 434 72.39 0 628421..629695 + 424 162448703 - sce0433 - hypothetical protein 435 76.02 +1 629775..631313 + 512 162448704 - sce0434 - GntR family transcriptional regulator 436 66.67 -1 631622..632089 + 155 162448705 - sce0435 - hypothetical protein 437 77.47 +1 632350..633858 - 502 162448706 - sce0436 - AMP-dependent synthetase and ligase 438 68.89 0 633869..634138 - 89 162448707 - sce0437 - Acyl carrier protein-like 439 65.80 -1 634173..635558 - 461 162448708 - sce0438 - cystathionine beta-synthase 440 72.73 0 635942..637309 + 455 162448709 - sce0439 - transcriptional regulator 441 65.33 -1 637441..637740 - 99 162448710 - sce0440 - hypothetical protein 442 64.81 -1 638271..638432 + 53 162448711 - sce0441 - hypothetical protein 443 68.97 0 638832..640046 + 404 162448712 - sce0442 - Serine-pyruvate aminotransferase 444 74.58 0 640043..641875 - 610 162448713 eriC sce0443 - chloride channel 445 76.54 +1 641937..642503 - 188 162448714 - sce0444 - MarR family transcriptional regulator 446 67.93 0 642746..643693 + 315 162448715 glyQ sce0445 - glycyl-tRNA synthetase subunit alpha 447 74.61 0 643805..644383 - 192 162448716 pyrE sce0446 - putative orotate phosphoribosyltransferase 448 81.51 +2 644380..645093 - 237 162448717 - sce0447 - hypothetical protein 449 68.57 0 645097..645411 - 104 162448718 - sce0448 - hypothetical protein 450 73.89 0 645466..645894 - 142 162448719 - sce0449 - hypothetical protein 451 70.40 0 646537..647901 + 454 162448720 - sce0450 - putative oxidoreductase 452 71.45 0 648022..648753 - 243 162448721 - sce0451 - hypothetical protein 453 64.30 -1 648800..649348 - 182 162448722 - sce0452 - hypothetical protein 454 75.76 +1 649421..650047 - 208 162448723 - sce0453 - DNA repair protein 455 74.62 0 650044..650697 - 217 162448724 - sce0454 - hypothetical protein 456 69.18 0 650866..651144 + 92 162448725 - sce0455 - Cro/CI family transcriptional regulator 457 66.25 -1 651516..652466 - 316 162448726 - sce0456 - integrase/recombinase 458 60.63 -2 653002..653382 + 126 162448727 - sce0457 - hypothetical protein 459 59.06 -2 653495..653836 + 113 162448728 - sce0458 - hypothetical protein 460 61.75 -2 654432..655286 + 284 162448729 - sce0459 - hypothetical protein 461 72.78 0 655505..656617 + 370 162448730 - sce0460 - hypothetical protein 462 67.14 0 657630..658052 + 140 162448731 - sce0461 - hypothetical protein 463 62.70 -2 658042..658470 + 142 162448732 - sce0462 - hypothetical protein 464 71.05 0 658672..659538 - 288 162448733 - sce0463 - hypothetical protein 465 59.24 -2 660517..661014 + 165 162448734 - sce0464 - hypothetical protein 466 66.09 -1 661030..661893 + 287 162448735 - sce0465 - hypothetical protein 467 60.03 -2 661904..662551 - 215 162448736 - sce0466 - putative secreted protein 468 64.75 -1 662563..663240 - 225 162448737 - sce0467 - putative membrane associated protein 469 77.00 +1 663249..666374 - 1041 162448738 - sce0468 - hypothetical protein 470 73.02 0 666769..667917 + 382 162448739 - sce0469 - protein kinase 471 70.62 0 667985..668617 + 210 162448740 - sce0470 - hypothetical protein 472 70.15 0 668709..670547 - 612 162448741 - sce0471 - hypothetical protein 473 65.70 -1 670790..671305 + 171 162448742 - sce0472 - hypothetical protein 474 75.25 +1 671371..672861 - 496 162448743 - sce0473 - hypothetical protein 475 77.03 +1 673430..674317 - 295 162448744 - sce0474 - hypothetical protein 476 68.65 0 674649..675806 + 385 162448745 adh1 sce0475 - alcohol dehydrogenase 477 71.52 0 676154..676627 + 157 162448746 - sce0476 - hypothetical protein 478 74.07 0 676691..677716 + 341 162448747 - sce0477 - hypothetical protein 479 72.41 0 677728..679293 + 521 162448748 yfbK sce0478 - hypothetical protein 480 68.65 0 679557..680414 + 285 162448749 - sce0479 - hypothetical protein 481 72.19 0 680425..681330 + 301 162448750 - sce0480 - hypothetical protein 482 78.06 +1 681396..682826 - 476 162448751 - sce0481 - hypothetical protein 483 79.42 +2 682993..685611 + 872 162448752 - sce0482 - hypothetical protein 484 79.40 +2 685655..686455 + 266 162448753 - sce0483 - hypothetical protein 485 79.17 +1 686502..687581 - 359 162448754 - sce0484 - hypothetical protein 486 74.64 0 687866..689257 + 463 162448755 - sce0485 - hypothetical protein 487 77.13 +1 689276..690250 - 324 162448756 - sce0486 - hypothetical protein 488 70.59 0 690730..692436 + 568 162448757 - sce0487 - protein kinase 489 72.74 0 692536..694725 + 729 162448758 otsA sce0488 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) 490 69.71 0 694742..696583 - 613 162448759 - sce0489 - hypothetical protein 491 75.40 +1 696792..697409 + 205 162448760 - sce0490 - hypothetical protein 492 70.49 0 697601..698935 + 444 162448761 mgtE1 sce0491 - Mg2+ transporter 493 65.36 -1 699935..700240 + 101 162448762 - sce0492 - hypothetical protein 494 70.60 0 700364..701101 + 245 162448763 - sce0493 - phosphoglycerate mutase 495 67.00 0 701207..702100 + 297 162448764 purU sce0494 - formyltetrahydrofolate deformylase 496 73.37 0 702226..702777 - 183 162448765 - sce0495 - hypothetical protein 497 65.66 -1 703434..704126 - 230 162448766 - sce0496 - putative glutathione transferase 498 78.06 +1 704295..705224 - 309 162448767 - sce0497 - putative homocysteine S-methyltransferase family protein 499 66.34 -1 705584..706204 + 206 162448768 - sce0498 - hypothetical protein 500 70.59 0 706252..707856 + 534 162448769 - sce0499 - protease 501 77.04 +1 707880..708824 + 314 162448770 - sce0500 - hypothetical protein 502 75.56 +1 708948..710522 + 524 162448771 - sce0501 - hypothetical protein 503 77.40 +1 711069..712550 + 493 162448772 copB sce0502 - copper tolerance protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0