version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 371 72.32 0 539320..539850 - 176 162448640 ybbT sce0370 - putative ureidoglycolate hydrolase 372 65.71 -1 540072..540698 + 208 162448641 - sce0371 - hypothetical protein 373 73.16 0 540698..541498 + 266 162448642 - sce0372 - hypothetical protein 374 73.76 0 541717..542928 + 403 162448643 - sce0373 - putative beta-ketoadipyl CoA thiolase 375 67.19 0 543089..543658 + 189 162448644 - sce0374 - putative peptidyl-prolyl cis-trans isomerase 376 74.74 0 543720..544982 - 420 162448645 - sce0375 - hypothetical protein 377 77.55 +1 545001..546047 - 348 162448646 - sce0376 - hypothetical protein 378 74.43 0 546044..547885 - 613 162448647 - sce0377 - metallo-beta-lactamase family protein 379 75.35 +1 548077..549885 + 602 162448648 sppA1 sce0378 - protease IV 380 69.78 0 550362..553766 + 1134 162448649 nrdA1 sce0379 - putative ribonucleoside-diphosphate reductase 381 71.94 0 553983..554627 + 214 162448650 - sce0380 - hypothetical protein 382 75.92 +1 554823..555611 + 262 162448651 - sce0381 - hypothetical protein 383 70.59 0 555955..556260 - 101 162448652 - sce0382 - hypothetical protein 384 69.93 0 556239..556514 - 91 162448653 - sce0383 - putative antitoxin of toxin-antitoxin stability system 385 77.27 +1 556583..557572 - 329 162448654 thiL sce0384 - thiamine-phosphate kinase 386 70.84 0 557569..559173 - 534 162448655 - sce0385 - two-component sensor histidine kinase 387 67.90 0 559170..559898 - 242 162448656 - sce0386 - hypothetical protein 388 70.24 0 560017..561834 - 605 162448657 - sce0387 - hypothetical protein 389 67.79 0 561879..562772 - 297 162448658 - sce0388 - hypothetical protein 390 74.65 0 563015..564091 - 358 162448659 - sce0389 - putative homoserine kinase 391 71.80 0 564273..566141 + 622 162448660 hflX1 sce0390 - putative GTP-binding protein 392 70.35 0 566187..567137 - 316 162448661 - sce0391 - hypothetical protein 393 72.65 0 567148..568401 - 417 162448662 - sce0392 - hypothetical protein 394 72.09 0 568588..569196 - 202 162448663 - sce0393 - putative siroheme synthase 395 71.58 0 569303..570178 - 291 162448664 - sce0394 - hypothetical protein 396 71.30 0 570175..571794 - 539 162448665 - sce0395 - putative outer membrane protein 397 76.87 +1 571846..572766 - 306 162448666 - sce0396 - hypothetical protein 398 72.90 0 573016..573705 - 229 162448667 hisIE sce0397 - hypothetical protein 399 71.38 0 573709..575172 - 487 162448668 lgt1 sce0398 - prolipoprotein diacylglyceryl transferase 400 70.71 0 575424..576140 + 238 162448669 - sce0399 - hypothetical protein 401 75.37 +1 576146..577696 + 516 162448670 - sce0400 - hypothetical protein 402 71.69 0 578491..580302 - 603 162448671 - sce0401 - protein kinase 403 66.08 -1 581602..582792 + 396 162448672 tufA1 sce0402 - elongation factor Tu 404 64.33 -1 582802..582972 + 56 162448673 rpmG1 sce0403 - hypothetical protein 405 67.17 0 583393..583791 + 132 162448674 secE sce0404 - preprotein translocase, SecE subunit 406 62.15 -2 583822..584352 + 176 162448675 nusG sce0405 - transcription antitermination protein NusG 407 64.41 -1 584470..584913 + 147 162448676 rplK sce0406 - 50S ribosomal protein L11 408 67.37 0 585059..585769 + 236 162448677 rplA sce0407 - hypothetical protein 409 63.47 -1 585773..586303 + 176 162448678 rplJ sce0408 - 50S ribosomal protein L10 410 65.63 -1 586402..586788 + 128 162448679 rplL sce0409 - 50S ribosomal protein L7/L12 411 66.13 -1 587152..591288 + 1378 162448680 rpoB sce0410 - DNA-directed RNA polymerase 412 67.27 0 591430..595713 + 1427 162448681 rpoC sce0411 - DNA-directed RNA polymerase, beta' subunit 413 70.96 0 596110..598392 + 760 162448682 - sce0412 - response regulator 414 72.70 0 598414..599043 + 209 162448683 rimJ1 sce0413 - ribosomal-protein-alanine N-acetyltransferase 415 71.52 0 599251..600198 + 315 162448684 panB sce0414 - 3-methyl-2-oxobutanoate hydroxymethyltransferase 416 79.06 +1 600311..602440 - 709 162448685 - sce0415 - hypothetical protein 417 76.35 +1 602437..603396 - 319 162448686 - sce0416 - hypothetical protein 418 73.01 0 603652..605511 + 619 162448687 - sce0417 - putative membrane bound zinc metallopeptidase 419 71.93 0 605515..606996 - 493 162448688 - sce0418 - hypothetical protein 420 72.50 0 607066..608334 - 422 162448689 - sce0419 - protein kinase 421 74.74 0 608331..609308 - 325 162448690 - sce0420 - hypothetical protein 422 74.62 0 609417..610472 + 351 162448691 - sce0421 - outer membrane protein 423 68.55 0 610515..611525 - 336 162448692 - sce0422 - hypothetical protein 424 76.11 +1 612591..614126 - 511 162448693 - sce0423 - hypothetical protein 425 72.09 0 614119..615777 - 552 162448694 - sce0424 - hypothetical protein 426 71.98 0 615998..617221 + 407 162448695 - sce0425 - hypothetical protein 427 70.55 0 617255..617692 + 145 162448696 - sce0426 - rhodanese-like domain-containing protein 428 73.98 0 617788..618498 + 236 162448697 - sce0427 - glycosyltransferase 429 72.15 0 618706..620928 + 740 162448698 - sce0428 - histidine kinase 430 69.92 0 620925..621293 + 122 162448699 - sce0429 - two-component response regulator 431 68.86 0 621281..622282 - 333 162448700 - sce0430 - hypothetical protein 432 76.84 +1 623237..627196 - 1319 162448701 - sce0431 - protein kinase 433 68.95 0 627663..628187 + 174 162448702 - sce0432 - hypothetical protein 434 72.39 0 628421..629695 + 424 162448703 - sce0433 - hypothetical protein 435 76.02 +1 629775..631313 + 512 162448704 - sce0434 - GntR family transcriptional regulator 436 66.67 -1 631622..632089 + 155 162448705 - sce0435 - hypothetical protein 437 77.47 +1 632350..633858 - 502 162448706 - sce0436 - AMP-dependent synthetase and ligase 438 68.89 0 633869..634138 - 89 162448707 - sce0437 - Acyl carrier protein-like 439 65.80 -1 634173..635558 - 461 162448708 - sce0438 - cystathionine beta-synthase 440 72.73 0 635942..637309 + 455 162448709 - sce0439 - transcriptional regulator 441 65.33 -1 637441..637740 - 99 162448710 - sce0440 - hypothetical protein 442 64.81 -1 638271..638432 + 53 162448711 - sce0441 - hypothetical protein 443 68.97 0 638832..640046 + 404 162448712 - sce0442 - Serine-pyruvate aminotransferase 444 74.58 0 640043..641875 - 610 162448713 eriC sce0443 - chloride channel 445 76.54 +1 641937..642503 - 188 162448714 - sce0444 - MarR family transcriptional regulator 446 67.93 0 642746..643693 + 315 162448715 glyQ sce0445 - glycyl-tRNA synthetase subunit alpha 447 74.61 0 643805..644383 - 192 162448716 pyrE sce0446 - putative orotate phosphoribosyltransferase 448 81.51 +2 644380..645093 - 237 162448717 - sce0447 - hypothetical protein 449 68.57 0 645097..645411 - 104 162448718 - sce0448 - hypothetical protein 450 73.89 0 645466..645894 - 142 162448719 - sce0449 - hypothetical protein 451 70.40 0 646537..647901 + 454 162448720 - sce0450 - putative oxidoreductase 452 71.45 0 648022..648753 - 243 162448721 - sce0451 - hypothetical protein 453 64.30 -1 648800..649348 - 182 162448722 - sce0452 - hypothetical protein 454 75.76 +1 649421..650047 - 208 162448723 - sce0453 - DNA repair protein 455 74.62 0 650044..650697 - 217 162448724 - sce0454 - hypothetical protein 456 69.18 0 650866..651144 + 92 162448725 - sce0455 - Cro/CI family transcriptional regulator 457 66.25 -1 651516..652466 - 316 162448726 - sce0456 - integrase/recombinase 458 60.63 -2 653002..653382 + 126 162448727 - sce0457 - hypothetical protein 459 59.06 -2 653495..653836 + 113 162448728 - sce0458 - hypothetical protein 460 61.75 -2 654432..655286 + 284 162448729 - sce0459 - hypothetical protein 461 72.78 0 655505..656617 + 370 162448730 - sce0460 - hypothetical protein 462 67.14 0 657630..658052 + 140 162448731 - sce0461 - hypothetical protein 463 62.70 -2 658042..658470 + 142 162448732 - sce0462 - hypothetical protein 464 71.05 0 658672..659538 - 288 162448733 - sce0463 - hypothetical protein 465 59.24 -2 660517..661014 + 165 162448734 - sce0464 - hypothetical protein 466 66.09 -1 661030..661893 + 287 162448735 - sce0465 - hypothetical protein 467 60.03 -2 661904..662551 - 215 162448736 - sce0466 - putative secreted protein 468 64.75 -1 662563..663240 - 225 162448737 - sce0467 - putative membrane associated protein 469 77.00 +1 663249..666374 - 1041 162448738 - sce0468 - hypothetical protein 470 73.02 0 666769..667917 + 382 162448739 - sce0469 - protein kinase 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.