version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3948 75.98 +1 5485187..5487043 + 618 162452217 - sce3944 - protein kinase 3949 67.05 0 5487544..5487807 + 87 162452218 - sce3945 - hypothetical protein 3950 73.09 0 5487768..5488592 - 274 162452219 - sce3946 - hypothetical protein 3951 75.33 +1 5488745..5490175 - 476 162452220 - sce3947 - protein kinase 3952 72.92 0 5490510..5491964 - 484 162452221 - sce3948 - polysaccharide biosynthesis protein, putative 3953 74.95 0 5492430..5492972 - 180 162452222 - sce3949 - hypothetical protein 3954 70.72 0 5493252..5493572 + 106 162452223 - sce3950 - hypothetical protein 3955 63.22 -1 5493825..5494463 - 212 162452224 - sce3951 - hypothetical protein 3956 73.33 0 5494662..5495816 - 384 162452225 gbd sce3952 - alcohol dehydrogenase 3957 69.16 0 5495813..5497174 - 453 162452226 glnA1 sce3953 - hypothetical protein 3958 73.66 0 5497282..5497896 - 204 162452227 - sce3954 - hypothetical protein 3959 72.16 0 5497889..5499745 - 618 162452228 - sce3955 - protein kinase 3960 67.84 0 5499868..5500122 - 84 162452229 - sce3956 - hypothetical protein 3961 65.24 -1 5500798..5501289 + 163 162452230 - sce3957 - putative cAMP phosphodiesterase 3962 64.29 -1 5501407..5501616 - 69 162452231 - sce3958 - hypothetical protein 3963 70.37 0 5501712..5502089 - 125 162452232 - sce3959 - hypothetical protein 3964 65.62 -1 5502326..5502706 + 126 162452233 - sce3960 - hypothetical protein 3965 76.40 +1 5502916..5504169 + 417 162452234 - sce3961 - hypothetical protein 3966 71.43 0 5504528..5506123 + 531 162452235 - sce3962 - hypothetical protein 3967 68.97 0 5506200..5506937 + 245 162452236 - sce3963 - putative ABC transport system ATP-binding protein 3968 75.52 +1 5507100..5507924 - 274 162452237 - sce3964 - hypothetical protein 3969 71.83 0 5508386..5509024 + 212 162452238 - sce3965 - putative two-component system response regulator 3970 67.77 0 5509108..5509380 - 90 162452239 - sce3966 - hypothetical protein 3971 68.49 0 5509676..5511262 - 528 162452240 - sce3967 - extracellular protease 3972 68.16 0 5511601..5512935 - 444 162452241 - sce3968 - hypothetical protein 3973 69.52 0 5513428..5513742 + 104 162452242 - sce3969 - hypothetical protein 3974 76.82 +1 5514001..5518905 - 1634 162452243 lhr2 sce3970 - putative ATP-dependent helicase 3975 68.65 0 5526374..5527933 + 519 162452244 - sce3971 - putative secreted protein 3976 80.58 +2 5527978..5532600 + 1540 162452245 - sce3972 - hypothetical protein 3977 72.97 0 5532620..5533111 - 163 162452246 - sce3973 - putative secreted protein 3978 72.93 0 5533206..5533892 + 228 162452247 - sce3974 - hypothetical protein 3979 63.56 -1 5534576..5534929 + 117 162452248 - sce3975 - hypothetical protein 3980 77.38 +1 5535242..5536510 + 422 162452249 - sce3976 - hypothetical protein 3981 70.34 0 5536833..5537486 + 217 162452250 - sce3977 - hypothetical protein 3982 72.99 0 5537773..5538594 + 273 162452251 - sce3978 - hypothetical protein 3983 69.18 0 5538611..5540443 - 610 162452252 - sce3979 - hypothetical protein 3984 65.37 -1 5540727..5541113 + 128 162452253 - sce3980 - hypothetical protein 3985 72.89 0 5541294..5541695 + 133 162452254 - sce3981 - protein phosphatase 3986 68.85 0 5541747..5541929 + 60 162452255 - sce3982 - xenobiotic reductase A 3987 71.22 0 5541975..5543006 + 343 162452256 - sce3983 - hypothetical protein 3988 72.13 0 5543119..5544675 + 518 162452257 - sce3984 - Hsp70 heat shock protein 3989 69.72 0 5544626..5545936 - 436 162452258 - sce3985 - positive regulator of sigma-B activity 3990 77.10 +1 5546155..5547093 - 312 162452259 - sce3986 - hypothetical protein 3991 71.27 0 5547250..5549247 - 665 162452260 tkt1 sce3987 - hypothetical protein 3992 67.76 0 5550275..5551282 + 335 162452261 - sce3988 - hypothetical protein 3993 71.46 0 5551347..5557358 + 2003 162452262 - sce3989 - protein kinase 3994 75.31 +1 5557423..5558544 - 373 162452263 - sce3990 - putative isovaleryl-CoA dehydrogenase protein 3995 63.44 -1 5558705..5559292 - 195 162452265 - sce3991 - hypothetical protein 3996 69.86 0 5559226..5560572 + 448 162452264 - sce3992 - hypothetical protein 3997 69.02 0 5560711..5561898 + 395 162452266 gst9 sce3993 - hypothetical protein 3998 72.60 0 5561965..5562672 + 235 162452267 - sce3994 - hypothetical protein 3999 75.00 0 5562679..5563110 - 143 162452268 - sce3995 - hypothetical protein 4000 71.85 0 5563269..5564117 + 282 162452269 - sce3996 - Cro/CI family transcriptional regulator 4001 71.86 0 5564186..5565649 - 487 162452270 - sce3997 - protein kinase 4002 71.34 0 5567211..5568965 + 584 162452271 - sce3998 - hypothetical protein 4003 64.71 -1 5569121..5569273 + 50 162452272 - sce3999 - hypothetical protein 4004 76.62 +1 5569394..5570227 + 277 162452273 - sce4000 - putative hydrolase 4005 73.33 0 5570258..5571442 - 394 162452274 - sce4001 - hypothetical protein 4006 72.22 0 5571657..5572286 + 209 162452275 - sce4002 - hypothetical protein 4007 77.75 +1 5572352..5573569 - 405 162452276 - sce4003 - major facilitator superfamily permease 4008 70.54 0 5573760..5574560 + 266 162452277 - sce4004 - DeoR family transcriptional regulator 4009 66.91 0 5574648..5575883 - 411 162452278 - sce4005 - glycosy hydrolase family protein 4010 65.91 -1 5575962..5578193 - 743 162452280 - sce4006 - type 3a cellulose-binding domain protein 4011 74.61 0 5578006..5579415 + 469 162452279 - sce4007 - sigma-54 dependent transcriptional regulator 4012 64.31 -1 5579890..5581248 + 452 162452281 - sce4008 - hypothetical protein 4013 64.34 -1 5581332..5582147 - 271 162452282 - sce4009 - putative secreted protein 4014 73.38 0 5582403..5583818 + 471 162452283 - sce4010 - protein kinase 4015 73.56 0 5583824..5584897 + 357 162452284 - sce4011 - putative secreted protein 4016 70.87 0 5585168..5585905 - 245 162452285 cadD sce4012 - cadmium resistance transporter, putative 4017 76.61 +1 5585999..5588461 + 820 162452286 - sce4013 - cation-transporting ATPase 4018 70.05 0 5588726..5590678 + 650 162452287 - sce4014 - putative secreted protein 4019 68.32 0 5590797..5592494 - 565 162452288 - sce4015 - hypothetical protein 4020 73.61 0 5592542..5592829 - 95 162452289 - sce_pseudo_04 - pseudogene 4021 67.53 0 5593084..5594466 - 460 162452290 - sce4016 - signal peptide 4022 69.16 0 5594468..5596189 - 573 162452291 - sce4017 - hypothetical protein 4023 71.88 0 5596538..5596729 - 63 162452292 - sce4018 - hypothetical protein 4024 69.62 0 5596884..5597999 + 371 162452293 - sce4019 - hypothetical protein 4025 67.15 0 5598314..5599351 + 345 162452294 - sce4020 - hypothetical protein 4026 69.59 0 5599389..5600720 + 443 162452295 - sce4021 - hypothetical protein 4027 69.99 0 5600726..5601958 - 410 162452296 - sce4022 - anti-anti sigma factor protein 4028 69.39 0 5601997..5602842 - 281 162452297 - sce4023 - putative uricase 4029 75.35 +1 5603061..5604569 + 502 162452298 - sce4024 - putative cobalamin binding protein 4030 70.13 0 5604688..5606043 + 451 162452299 - sce4025 - two-component sensor histidine kinase 4031 69.77 0 5606040..5607230 + 396 162452300 - sce4026 - sensor histidine kinase/response regulator hybrid 4032 68.91 0 5607265..5609892 - 875 162452301 cga1 sce4027 - glucan 1,4-alpha-glucosidase 4033 68.69 0 5610371..5611507 - 378 162452302 rbsC2 sce4028 - ribose ABC transporter permease 4034 71.97 0 5611573..5613099 - 508 162452303 rbsA1 sce4029 - ribose ABC transporter ATP-binding protein 4035 67.55 0 5613179..5614201 - 340 162452304 rbsB1 sce4030 - ribose ABC transporter periplasmic-binding protein 4036 70.70 0 5614381..5619462 - 1693 162452305 - sce4031 - protein kinase 4037 70.50 0 5619798..5621024 - 408 162452306 - sce4032 - glycine-rich protein 4038 72.93 0 5621079..5622803 - 574 162452307 - sce4033 - PE-PGRS family protein 4039 66.44 -1 5623188..5624069 - 293 162452308 nrtD sce4034 - nitrate/nitrite ABC transporter ATP-binding protein 4040 69.31 0 5624066..5624896 - 276 162452309 nrtC1 sce4035 - nitrate/nitrite ABC transporter ATP-binding protein 4041 66.04 -1 5624902..5625699 - 265 162452310 nrtB sce4036 - nitrate/nitrite ABC transporter membrane protein 4042 67.27 0 5625769..5627088 - 439 162452311 nrtA sce4037 - nitrate/nitrite ABC transporter substrate-binding protein 4043 73.20 0 5627666..5628277 + 203 162452312 - sce4038 - hypothetical protein 4044 76.70 +1 5628455..5630647 + 730 162452313 - sce4039 - hypothetical protein 4045 77.78 +1 5630662..5631318 + 218 162452314 - sce4040 - putative secreted protein 4046 75.48 +1 5631325..5632266 + 313 162452315 - sce4041 - hypothetical protein 4047 64.51 -1 5632334..5633866 - 510 162452316 - sce4042 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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