version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3453 73.89 0 4814438..4816846 + 802 162451722 - sce3449 - Alpha-glucosidase family protein 3454 75.78 +1 4816874..4817773 - 299 162451723 - sce3450 - LysR family transcriptional regulator 3455 74.90 0 4817823..4818539 + 238 162451724 - sce3451 - short chain dehydrogenase 3456 65.60 -1 4818845..4819783 + 312 162451725 - sce3452 - hypothetical protein 3457 73.86 0 4820204..4821037 + 277 162451726 - sce3453 - SAM-dependent methyltransferase 3458 69.36 0 4821162..4822682 - 506 162451727 - sce3454 - hypothetical protein 3459 69.64 0 4822869..4824380 - 503 162451728 bglA1 sce3455 - Beta-glucosidase 3460 74.30 0 4824501..4825469 + 322 162451729 qor2 sce3456 - NADPH:quinone reductase 3461 63.93 -1 4825670..4826035 + 121 162451730 - sce3457 - hypothetical protein 3462 67.86 0 4826290..4827210 + 306 162451731 oppB2 sce3458 - oligopeptide transport permease protein 3463 70.09 0 4827213..4828265 + 350 162451732 oppC sce3459 - oligopeptide transport permease protein 3464 72.09 0 4828317..4829330 + 337 162451733 oppD sce3460 - oligopeptide ABC transporter ATP-binding protein 3465 71.09 0 4829327..4830343 + 338 162451734 oppF sce3461 - oligopeptide ABC transporter ATP-binding protein 3466 76.00 +1 4830469..4831839 + 456 162451735 - sce3462 - hypothetical protein 3467 73.58 0 4831836..4832312 + 158 162451736 bolA sce3463 - BolA-like protein 3468 70.85 0 4832327..4833139 + 270 162451737 - sce3464 - putative phosphoesterase 3469 73.72 0 4833299..4835482 + 727 162451738 - sce3465 - putative secreted protein 3470 69.21 0 4835511..4838264 + 917 162451739 - sce3466 - hypothetical protein 3471 66.67 -1 4838326..4838742 - 138 162451740 - sce3467 - hypothetical protein 3472 72.36 0 4839420..4840280 + 286 162451741 - sce3468 - putative secreted protein 3473 78.47 +1 4840282..4844541 + 1419 162451742 - sce3469 - protein kinase 3474 69.52 0 4844958..4845869 + 303 162451743 lip sce3470 - triacylglycerol lipase 3475 79.20 +1 4845888..4846964 + 358 162451744 lipH sce3471 - putative lipase activator protein 3476 74.00 0 4846948..4847670 - 240 162451745 - sce3472 - putative integral membrane protein 3477 70.71 0 4848202..4848696 - 164 162451746 - sce3473 - hypothetical protein 3478 71.26 0 4848790..4850031 - 413 162451747 - sce3474 - hypothetical protein 3479 74.69 0 4850109..4851167 - 352 162451748 - sce3475 - hypothetical protein 3480 69.23 0 4851724..4852425 + 233 162451749 - sce3476 - hypothetical protein 3481 68.93 0 4852832..4854292 + 486 162451750 - sce3477 - hypothetical protein 3482 70.93 0 4854401..4855384 - 327 162451751 - sce3478 - fatty acid desaturase 3483 70.02 0 4855461..4856087 - 208 162451752 - sce3479 - TetR family transcriptional regulator 3484 62.76 -2 4856346..4856729 - 127 162451753 - sce3480 - hypothetical protein 3485 72.91 0 4856746..4857450 - 234 162451754 - sce3481 - hypothetical protein 3486 71.31 0 4857640..4858263 - 207 162451755 - sce3482 - ECF family RNA polymerase sigma factor 3487 65.75 -1 4858547..4860403 + 618 162451756 - sce3483 - integrin-like repeat-containing cell wall-associated hydrolase 3488 61.27 -2 4860548..4860973 + 141 162451757 - sce3484 - hypothetical protein 3489 68.72 0 4861600..4864137 - 845 162451758 - sce3485 - hypothetical protein 3490 74.51 0 4864393..4865961 - 522 162451759 chdh sce3486 - choline dehydrogenase 3491 67.54 0 4866126..4866470 + 114 162451760 - sce3487 - hypothetical protein 3492 68.71 0 4866474..4868918 + 814 162451761 nirB1 sce3488 - nitrite reductase 3493 72.33 0 4868930..4869247 + 105 162451762 - sce3489 - nitrite reductase small subunit, 3494 74.64 0 4869400..4871292 + 630 162451763 - sce3490 - protein kinase 3495 63.76 -1 4871602..4872702 + 366 162451764 - sce3491 - putative fatty acid desaturase 3496 65.49 -1 4872702..4873553 + 283 162451765 - sce3492 - epoxide hydrolase 3497 67.94 0 4873844..4878322 + 1492 162451766 - sce3493 - protein kinase 3498 64.32 -1 4878307..4878945 - 212 162451767 - sce3494 - ECF family RNA polymerase sigma factor 3499 69.84 0 4878949..4879452 + 167 162451768 - sce3495 - hypothetical protein 3500 73.56 0 4879831..4880439 + 202 162451769 - sce3496 - hypothetical protein 3501 71.00 0 4880639..4886734 + 2031 162451770 - sce3497 - protein kinase 3502 74.17 0 4887361..4887933 - 190 162451771 - sce3498 - hypothetical protein 3503 74.91 0 4888135..4889262 - 375 162451772 - sce3499 - hypothetical protein 3504 74.16 0 4889259..4889885 - 208 162451773 - sce3500 - hypothetical protein 3505 70.34 0 4889919..4890680 - 253 162451774 - sce3501 - hypothetical protein 3506 67.32 0 4890963..4891883 + 306 162451775 - sce3502 - truncated anti-anti sigma factor protein 3507 68.33 0 4891895..4892134 + 79 162451776 - sce3503 - truncated anti-anti sigma factor protein 3508 71.03 0 4892256..4893929 + 557 162451777 - sce3504 - anti-anti sigma factor protein 3509 74.32 0 4893986..4895239 - 417 162451778 - sce3505 - hypothetical protein 3510 75.50 +1 4895508..4897172 + 554 162451779 - sce3506 - hypothetical protein 3511 71.22 0 4897124..4900639 - 1171 162451780 - sce3507 - two-component hybrid sensor and regulator 3512 72.31 0 4900646..4901743 - 365 162451781 ydgG sce3508 - putative transport protein 3513 67.61 0 4901895..4902425 - 176 162451782 - sce3509 - general stress protein 3514 70.71 0 4902450..4902548 - 32 162451783 - sce3510 - hypothetical protein 3515 75.42 +1 4902624..4903640 - 338 162451784 - sce3511 - hypothetical protein 3516 72.10 0 4903637..4904704 - 355 162451785 yniI sce3512 - hypothetical protein 3517 72.91 0 4904823..4906199 - 458 162451786 - sce3513 - putative hydrolase 3518 75.49 +1 4908257..4909276 - 339 162451787 - sce3514 - putative secreted protein 3519 71.35 0 4909803..4910315 + 170 162451788 - sce3515 - hypothetical protein 3520 68.97 0 4910724..4917440 + 2238 162451789 - sce3516 - Rhs family protein 3521 57.81 -2 4917560..4918033 + 157 162451790 - sce3517 - hypothetical protein 3522 71.90 0 4918098..4921211 + 1037 162451791 - sce3518 - hypothetical protein 3523 65.68 -1 4921476..4922084 + 202 162451792 - sce3519 - putative secreted protein 3524 65.26 -1 4922137..4922562 - 141 162451793 - sce3520 - hypothetical protein 3525 73.50 0 4922746..4923345 - 199 162451794 - sce3521 - hypothetical protein 3526 72.17 0 4923358..4923993 - 211 162451795 - sce3522 - hypothetical protein 3527 71.65 0 4924177..4926465 - 762 162451796 - sce3523 - hypothetical protein 3528 70.90 0 4926839..4927972 - 377 162451797 - sce3524 - hypothetical protein 3529 70.90 0 4928632..4929624 + 330 162451798 cysK2 sce3525 - cysteine synthase A 3530 69.79 0 4929632..4930624 + 330 162451799 srpH1 sce3526 - hypothetical protein 3531 71.82 0 4930640..4930930 - 96 162451800 - sce3527 - hypothetical protein 3532 62.24 -2 4930955..4931248 - 97 162451801 mgtE sce3528 - putative cation transport protein 3533 71.61 0 4931345..4933345 + 666 162451802 - sce3529 - putative beta-lactamase hcpE precursor 3534 73.98 0 4933470..4936739 - 1089 162451803 uvrD sce3530 - ATP-dependent DNA helicase 3535 72.68 0 4937013..4938176 - 387 162451804 - sce3531 - hypothetical protein 3536 72.44 0 4938708..4940144 + 478 162451805 deaD2 sce3532 - hypothetical protein 3537 67.97 0 4940365..4941435 + 356 162451806 - sce3533 - M24/M37 family peptidase 3538 67.41 0 4941706..4942107 + 133 162451807 - sce3534 - hypothetical protein 3539 72.64 0 4942204..4942521 + 105 162451808 - sce3535 - hypothetical protein 3540 56.25 -2 4942788..4943219 - 143 162451809 - sce3536 - hypothetical protein 3541 69.05 0 4943351..4944607 - 418 162451810 gltP sce3537 - proton glutamate symport protein 3542 76.18 +1 4944783..4946432 + 549 162451811 - sce3538 - protein kinase 3543 71.14 0 4946510..4947001 + 163 162451812 - sce3539 - hypothetical protein 3544 71.85 0 4947034..4947939 - 301 162451813 - sce3540 - hypothetical protein 3545 73.73 0 4948017..4948766 - 249 162451814 map2 sce3541 - hypothetical protein 3546 77.04 +1 4948870..4949187 + 105 162451815 - sce3542 - LysR family transcriptional regulator 3547 78.50 +1 4949217..4951058 + 613 162451816 draG sce3543 - hypothetical protein 3548 70.94 0 4951158..4953473 - 771 162451817 - sce3544 - hypothetical protein 3549 66.07 -1 4954102..4955775 - 557 162451818 - sce3545 - Rhs family carbohydrate-binding protein 3550 72.89 0 4955886..4956881 - 331 162451819 gnd1 sce3546 - 6-phosphogluconate dehydrogenase-like protein 3551 71.66 0 4956989..4958029 - 346 162451820 - sce3547 - anti-anti-sigma factor protein 3552 68.92 0 4958323..4958544 + 73 162451821 - sce3548 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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