version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3406 69.66 0 4751267..4752370 - 367 162451675 - sce3403 - transposase 3407 70.96 0 4752367..4752879 - 170 162451676 - sce3404 - hypothetical protein 3408 68.71 0 4753056..4755545 - 829 162451677 ytbE sce3405 - prostaglandin-E 3409 63.29 -1 4756189..4756692 + 167 162451678 - sce3406 - hypothetical protein 3410 63.14 -1 4756676..4756987 + 103 162451679 - sce3407 - hypothetical protein 3411 71.24 0 4756977..4757129 + 50 162451680 - sce3408 - hypothetical protein 3412 64.68 -1 4757157..4757660 + 167 162451681 - sce3409 - hypothetical protein 3413 69.14 0 4757377..4757538 + 53 162451682 - sce3410 - hypothetical protein 3414 73.89 0 4757864..4759219 - 451 162451683 - sce3411 - sigma-54 dependent transcriptional regulator 3415 70.71 0 4759298..4760287 + 329 162451684 - sce3412 - hypothetical protein 3416 76.15 +1 4760284..4760958 + 224 162451685 - sce3413 - hypothetical protein 3417 68.04 0 4760989..4762077 - 362 162451686 - sce3414 - putative secreted lyase 3418 74.27 0 4762538..4766968 + 1476 162451687 topB sce3415 - DNA topoisomerase III 3419 64.65 -1 4767330..4768967 - 545 162451688 - sce3416 - hypothetical protein 3420 73.87 0 4769103..4769921 - 272 162451689 - sce3417 - putative short chain dehydrogenase 3421 67.48 0 4770402..4772486 + 694 162451690 - sce3418 - hypothetical protein 3422 71.09 0 4772483..4774381 + 632 162451691 - sce3419 - outer membrane protein 3423 73.89 0 4774568..4775218 - 216 162451692 - sce3420 - hypothetical protein 3424 75.72 +1 4775471..4775989 + 172 162451693 - sce3421 - foldase protein prsA 4 precursor 3425 78.67 +1 4776139..4776621 + 160 162451694 - sce3422 - mitogen-activated protein kinase 6 3426 74.36 0 4776664..4778457 - 597 162451695 - sce3423 - sensory box histidine kinase PhoR 3427 65.70 -1 4778581..4779198 + 205 162451696 pitX2 sce3424 - putative Pit accessory protein 3428 70.04 0 4779195..4780202 + 335 162451697 pit2 sce3425 - inorganic phosphate transporter 3429 70.58 0 4780385..4781584 - 399 162451698 - sce3426 - phosphofructokinase-domain-containing protein 3430 74.62 0 4781764..4784505 - 913 162451699 ppc sce3427 - hypothetical protein 3431 74.25 0 4784714..4786243 + 509 162451700 - sce3428 - protein kinase 3432 74.95 0 4786311..4786769 - 152 162451701 dut sce3429 - dUTP diphosphatase 3433 72.44 0 4786788..4788173 - 461 162451702 - sce3430 - hypothetical protein 3434 76.50 +1 4788281..4789144 + 287 162451703 - sce3431 - hypothetical protein 3435 69.33 0 4789319..4790068 - 249 162451704 plsC3 sce3432 - 1-acylglycerol-3-phosphate O-acyltransferase 3436 70.37 0 4790245..4790676 - 143 162451705 - sce3433 - hypothetical protein 3437 76.28 +1 4790686..4791528 - 280 162451706 - sce3434 - hypothetical protein 3438 68.81 0 4791578..4792417 - 279 162451707 - sce3435 - hypothetical protein 3439 71.87 0 4792591..4792917 - 108 162451708 - sce3436 - hypothetical protein 3440 75.65 +1 4793285..4794286 + 333 162451709 - sce3437 - putative secreted protein 3441 76.79 +1 4794267..4795343 + 358 162451710 - sce3438 - hypothetical protein 3442 67.09 0 4795440..4795916 + 158 162451711 - sce3439 - hypothetical protein 3443 72.25 0 4796406..4798895 - 829 162451712 - sce3440 - hypothetical protein 3444 72.41 0 4799763..4800929 - 388 162451713 - sce3441 - hypothetical protein 3445 72.25 0 4801031..4801567 - 178 162451714 - sce3442 - hypothetical protein 3446 75.41 +1 4801760..4802731 + 323 162451715 - sce3443 - hypothetical protein 3447 79.34 +2 4802906..4808452 - 1848 162451718 - sce_pseudo_03 - pseudogene 3448 73.74 0 4802936..4804009 + 357 162451716 - sce3444 - hypothetical protein 3449 79.27 +2 4804036..4804662 - 208 162451717 - sce3445 - hypothetical protein 3450 70.61 0 4808524..4810983 + 819 162451719 oppA1 sce3446 - periplasmic oligopeptide-binding protein precursor 3451 70.01 0 4811102..4812118 + 338 162451720 galE1 sce3447 - hypothetical protein 3452 72.42 0 4812129..4814441 + 770 162451721 oppA2 sce3448 - periplasmic oligopeptide-binding protein precursor 3453 73.89 0 4814438..4816846 + 802 162451722 - sce3449 - Alpha-glucosidase family protein 3454 75.78 +1 4816874..4817773 - 299 162451723 - sce3450 - LysR family transcriptional regulator 3455 74.90 0 4817823..4818539 + 238 162451724 - sce3451 - short chain dehydrogenase 3456 65.60 -1 4818845..4819783 + 312 162451725 - sce3452 - hypothetical protein 3457 73.86 0 4820204..4821037 + 277 162451726 - sce3453 - SAM-dependent methyltransferase 3458 69.36 0 4821162..4822682 - 506 162451727 - sce3454 - hypothetical protein 3459 69.64 0 4822869..4824380 - 503 162451728 bglA1 sce3455 - Beta-glucosidase 3460 74.30 0 4824501..4825469 + 322 162451729 qor2 sce3456 - NADPH:quinone reductase 3461 63.93 -1 4825670..4826035 + 121 162451730 - sce3457 - hypothetical protein 3462 67.86 0 4826290..4827210 + 306 162451731 oppB2 sce3458 - oligopeptide transport permease protein 3463 70.09 0 4827213..4828265 + 350 162451732 oppC sce3459 - oligopeptide transport permease protein 3464 72.09 0 4828317..4829330 + 337 162451733 oppD sce3460 - oligopeptide ABC transporter ATP-binding protein 3465 71.09 0 4829327..4830343 + 338 162451734 oppF sce3461 - oligopeptide ABC transporter ATP-binding protein 3466 76.00 +1 4830469..4831839 + 456 162451735 - sce3462 - hypothetical protein 3467 73.58 0 4831836..4832312 + 158 162451736 bolA sce3463 - BolA-like protein 3468 70.85 0 4832327..4833139 + 270 162451737 - sce3464 - putative phosphoesterase 3469 73.72 0 4833299..4835482 + 727 162451738 - sce3465 - putative secreted protein 3470 69.21 0 4835511..4838264 + 917 162451739 - sce3466 - hypothetical protein 3471 66.67 -1 4838326..4838742 - 138 162451740 - sce3467 - hypothetical protein 3472 72.36 0 4839420..4840280 + 286 162451741 - sce3468 - putative secreted protein 3473 78.47 +1 4840282..4844541 + 1419 162451742 - sce3469 - protein kinase 3474 69.52 0 4844958..4845869 + 303 162451743 lip sce3470 - triacylglycerol lipase 3475 79.20 +1 4845888..4846964 + 358 162451744 lipH sce3471 - putative lipase activator protein 3476 74.00 0 4846948..4847670 - 240 162451745 - sce3472 - putative integral membrane protein 3477 70.71 0 4848202..4848696 - 164 162451746 - sce3473 - hypothetical protein 3478 71.26 0 4848790..4850031 - 413 162451747 - sce3474 - hypothetical protein 3479 74.69 0 4850109..4851167 - 352 162451748 - sce3475 - hypothetical protein 3480 69.23 0 4851724..4852425 + 233 162451749 - sce3476 - hypothetical protein 3481 68.93 0 4852832..4854292 + 486 162451750 - sce3477 - hypothetical protein 3482 70.93 0 4854401..4855384 - 327 162451751 - sce3478 - fatty acid desaturase 3483 70.02 0 4855461..4856087 - 208 162451752 - sce3479 - TetR family transcriptional regulator 3484 62.76 -2 4856346..4856729 - 127 162451753 - sce3480 - hypothetical protein 3485 72.91 0 4856746..4857450 - 234 162451754 - sce3481 - hypothetical protein 3486 71.31 0 4857640..4858263 - 207 162451755 - sce3482 - ECF family RNA polymerase sigma factor 3487 65.75 -1 4858547..4860403 + 618 162451756 - sce3483 - integrin-like repeat-containing cell wall-associated hydrolase 3488 61.27 -2 4860548..4860973 + 141 162451757 - sce3484 - hypothetical protein 3489 68.72 0 4861600..4864137 - 845 162451758 - sce3485 - hypothetical protein 3490 74.51 0 4864393..4865961 - 522 162451759 chdh sce3486 - choline dehydrogenase 3491 67.54 0 4866126..4866470 + 114 162451760 - sce3487 - hypothetical protein 3492 68.71 0 4866474..4868918 + 814 162451761 nirB1 sce3488 - nitrite reductase 3493 72.33 0 4868930..4869247 + 105 162451762 - sce3489 - nitrite reductase small subunit, 3494 74.64 0 4869400..4871292 + 630 162451763 - sce3490 - protein kinase 3495 63.76 -1 4871602..4872702 + 366 162451764 - sce3491 - putative fatty acid desaturase 3496 65.49 -1 4872702..4873553 + 283 162451765 - sce3492 - epoxide hydrolase 3497 67.94 0 4873844..4878322 + 1492 162451766 - sce3493 - protein kinase 3498 64.32 -1 4878307..4878945 - 212 162451767 - sce3494 - ECF family RNA polymerase sigma factor 3499 69.84 0 4878949..4879452 + 167 162451768 - sce3495 - hypothetical protein 3500 73.56 0 4879831..4880439 + 202 162451769 - sce3496 - hypothetical protein 3501 71.00 0 4880639..4886734 + 2031 162451770 - sce3497 - protein kinase 3502 74.17 0 4887361..4887933 - 190 162451771 - sce3498 - hypothetical protein 3503 74.91 0 4888135..4889262 - 375 162451772 - sce3499 - hypothetical protein 3504 74.16 0 4889259..4889885 - 208 162451773 - sce3500 - hypothetical protein 3505 70.34 0 4889919..4890680 - 253 162451774 - sce3501 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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