version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3290 79.65 +2 4603916..4605286 - 456 162451559 - sce3287 - sensor histidine kinase 3291 74.45 0 4605283..4606053 - 256 162451560 - sce3288 - two-component response regulator 3292 75.79 +1 4605983..4606585 - 200 162451561 - sce3289 - hypothetical protein 3293 72.19 0 4606788..4607276 + 162 162451562 - sce3290 - hypothetical protein 3294 72.25 0 4607319..4610237 - 972 162451563 - sce3291 - biotin/lipoyl attachment domain-containing protein 3295 70.13 0 4610240..4611973 - 577 162451564 - sce3292 - acyl-CoA carboxylase 3296 70.08 0 4612170..4613516 - 448 162451565 - sce3293 - 4-hydroxybutyrate coenzyme A transferase 3297 67.88 0 4613617..4614027 - 136 162451566 - sce3294 - CBS domain-containing protein 3298 69.95 0 4614219..4615010 - 263 162451567 - sce3295 - hypothetical protein 3299 72.15 0 4615427..4616101 + 224 162451568 - sce3296 - hypothetical protein 3300 75.33 +1 4616333..4617694 + 453 162451569 - sce3297 - iduronate-2-sulfatase 3301 74.34 0 4617915..4619570 - 551 162451570 - sce3298 - PE-PGRS family protein 3302 69.79 0 4620390..4621382 + 330 162451571 - sce3299 - latent transforming growth factor beta binding protein 3303 74.98 0 4621455..4622597 + 380 162451572 - sce3300 - hypothetical protein 3304 64.69 -1 4622642..4623553 - 303 162451573 - sce3301 - hypothetical protein 3305 68.57 0 4623957..4624901 + 314 162451574 - sce3302 - hypothetical protein 3306 70.03 0 4624938..4626098 - 386 162451575 - sce3303 - hypothetical protein 3307 67.37 0 4626587..4629004 - 805 162451576 - sce3304 - putative xylosidase/arabinosidase 3308 65.89 -1 4629134..4630165 - 343 162451577 - sce3305 - inner membrane ABC transporter permease protein YjfF 3309 68.27 0 4630180..4631238 - 352 162451578 - sce3306 - ribose/xylose/arabinose/galactoside ABC-type transporter permease 3310 69.75 0 4631235..4632758 - 507 162451579 - sce3307 - put. ATP-binding component of a transport system 3311 64.61 -1 4632805..4633776 - 323 162451580 - sce3308 - putative periplasmic protein precursor 3312 65.75 -1 4633860..4634510 - 216 162451581 araD sce3309 - L-ribulose-5-phosphate 4-epimerase 3313 69.32 0 4634569..4636074 - 501 162451582 araA sce3310 - L-arabinose isomerase 3314 71.39 0 4636086..4637780 - 564 162451583 araB sce3311 - ribulokinase 3315 70.61 0 4637898..4638125 + 75 162451584 - sce3312 - hypothetical protein 3316 71.43 0 4638189..4638755 - 188 162451585 - sce3313 - putative secreted protein 3317 68.49 0 4638752..4640176 - 474 162451586 - sce3314 - putative secreted protein 3318 68.82 0 4640519..4641955 - 478 162451587 - sce3315 - hypothetical protein 3319 70.41 0 4641952..4643553 - 533 162451588 - sce3316 - hypothetical protein 3320 71.25 0 4644230..4645537 + 435 162451589 lacI2 sce3317 - HTH-type transcriptional repressor purR 3321 65.02 -1 4645977..4647068 + 363 162451590 - sce3318 - putative endoglucanase 3322 68.02 0 4647305..4648558 - 417 162451591 - sce3319 - putative secreted protein 3323 70.79 0 4648943..4650517 - 524 162451592 - sce3320 - hypothetical protein 3324 70.02 0 4650639..4653410 + 923 162451593 - sce3321 - hypothetical protein 3325 69.99 0 4653651..4654673 + 340 162451594 - sce3322 - put. D-ribose-binding periplasmic protein 3326 76.59 +1 4654681..4656201 + 506 162451595 - sce3323 - sugar ABC transporter ATP-binding protein 3327 74.10 0 4656198..4657139 + 313 162451596 - sce3324 - transport system permease protein 3328 70.63 0 4657186..4657992 - 268 162451597 - sce3325 - hypothetical protein 3329 66.45 -1 4658153..4658605 - 150 162451598 - sce3326 - putative secreted protein 3330 68.81 0 4658865..4660031 + 388 162451599 - sce3327 - extracellular nuclease 3331 76.45 +1 4660096..4661076 + 326 162451600 - sce3328 - hypothetical protein 3332 68.03 0 4661048..4661632 - 194 162451601 - sce3329 - hypothetical protein 3333 68.45 0 4661702..4662712 - 336 162451602 pit1 sce3330 - low-affinity inorganic phosphate permease 3334 63.58 -1 4662723..4663370 - 215 162451603 pitX1 sce3331 - putative Pit accessory protein 3335 77.52 +1 4663616..4664656 - 346 162451604 - sce3332 - AraC family transcriptional regulator 3336 69.97 0 4664881..4665849 + 322 162451605 yqkF sce3333 - aldo/keto reductase family oxidoreductase 3337 70.20 0 4666023..4666787 + 254 162451606 - sce3334 - hypothetical protein 3338 72.90 0 4666966..4667559 - 197 162451607 - sce3335 - hypothetical protein 3339 70.82 0 4667569..4669326 - 585 162451608 - sce3336 - putative isoquinoline 1-oxidoreductase 3340 66.23 -1 4669701..4670162 - 153 162451609 - sce3337 - [2Fe-2S]-binding protein 3341 75.44 +1 4670401..4672065 + 554 162451610 xdh sce3338 - hypothetical protein 3342 66.93 0 4672066..4672839 - 257 162451611 - sce3339 - hypothetical protein 3343 65.78 -1 4672922..4673374 - 150 162451612 - sce3340 - hypothetical protein 3344 71.93 0 4673779..4674348 + 189 162451613 - sce3341 - putative secreted protein 3345 71.49 0 4674382..4675626 - 414 162451614 - sce3342 - hypothetical protein 3346 71.24 0 4675623..4676474 - 283 162451615 - sce3343 - hypothetical protein 3347 68.54 0 4676634..4677539 + 301 162451616 - sce3344 - hypothetical protein 3348 73.14 0 4677536..4678894 + 452 162451617 - sce3345 - hypothetical protein 3349 65.27 -1 4678897..4679469 + 190 162451618 - sce3346 - hypothetical protein 3350 73.27 0 4679597..4683520 + 1307 162451619 - sce3347 - protein kinase 3351 67.85 0 4683637..4684482 - 281 162451620 - sce3348 - hypothetical protein 3352 68.87 0 4684812..4685219 + 135 162451621 - sce3349 - hypothetical protein 3353 71.75 0 4685528..4687042 - 504 162451622 crtI3 sce3350 - putative phytoene dehydrogenase 3354 76.02 +1 4688186..4690249 + 687 162451623 - sce3351 - putative beta-ketoacyl synthase 3355 69.52 0 4690242..4690556 + 104 162451624 - sce3352 - hypothetical protein 3356 72.52 0 4690540..4691598 + 352 162451625 - sce3353 - putative aminomethyltransferase 3357 73.82 0 4691595..4692335 + 246 162451626 fabG7 sce3354 - 3-oxoacyl-[acyl-carrier protein] reductase 3358 76.67 +1 4692332..4693261 + 309 162451627 fabD2 sce3355 - [Acyl-carrier-protein] S-malonyltransferase 3359 70.94 0 4693258..4693866 + 202 162451628 - sce3356 - putative (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase 3360 74.78 0 4693923..4695290 + 455 162451629 - sce3357 - hypothetical protein 3361 72.87 0 4695375..4696019 - 214 162451630 - sce3358 - hypothetical protein 3362 74.13 0 4696327..4697157 + 276 162451631 minC sce3359 - septum site-determining protein MinC 3363 67.99 0 4697179..4698921 - 580 162451632 - sce3360 - ABC-type dipeptide transport system, periplasmic component 3364 74.12 0 4699208..4700173 - 321 162451633 - sce3361 - hypothetical protein 3365 67.94 0 4700283..4700990 + 235 162451634 - sce3362 - hypothetical protein 3366 74.25 0 4701073..4702773 - 566 162451635 - sce3363 - putative secreted protein 3367 69.41 0 4702921..4703358 - 145 162451636 - sce3364 - hypothetical protein 3368 62.81 -1 4703435..4704574 - 379 162451637 - sce3365 - putative sugar ABC transporter 3369 69.08 0 4705344..4706171 + 275 162451638 minD sce3366 - septum site-determining protein minD (cell division inhibitor minD) 3370 69.21 0 4706184..4706498 + 104 162451639 minE sce3367 - cell division topological specificity factor 3371 77.49 +1 4706507..4707430 - 307 162451640 - sce3368 - hypothetical protein 3372 77.37 +1 4707427..4710462 - 1011 162451641 helZ sce3369 - SWF/SNF family helicase 3373 65.50 -1 4711363..4712997 + 544 162451642 - sce3370 - hypothetical protein 3374 69.68 0 4713127..4714089 + 320 162451643 - sce3371 - hypothetical protein 3375 76.02 +1 4714114..4715097 + 327 162451644 ansB sce3372 - L-asparaginase 3376 67.67 0 4715065..4716762 - 565 162451645 - sce3373 - hypothetical protein 3377 66.34 -1 4716954..4718174 - 406 162451646 - sce3374 - hypothetical protein 3378 75.44 +1 4718625..4719080 - 151 162451647 - sce3375 - cytidine/deoxycytidylate deaminase 3379 68.68 0 4719077..4720117 - 346 162451648 - sce3376 - ABC transport system substrate-binding protein 3380 72.48 0 4720114..4720956 - 280 162451649 - sce3377 - ABC transport system ATP-binding protein 3381 74.70 0 4720956..4721801 - 281 162451650 - sce3378 - ABC transporter permease protein 3382 67.99 0 4721805..4722407 - 200 162451651 - sce3379 - putative isochorismatase hydrolase 3383 69.33 0 4722709..4723683 - 324 162451652 - sce3380 - anti-anti sigma factor protein 3384 72.33 0 4724348..4725283 + 311 162451653 - sce3381 - hypothetical protein 3385 73.23 0 4725399..4726388 + 329 162451654 - sce3382 - hypothetical protein 3386 75.18 +1 4726423..4727550 - 375 162451655 - sce3383 - hypothetical protein 3387 71.46 0 4727712..4728983 + 423 162451656 - sce3384 - multidrug resistance protein 3388 65.82 -1 4729082..4729435 - 117 162451657 - sce3385 - hypothetical protein 3389 72.18 0 4729784..4732738 + 984 162451658 - sce3386 - protein kinase 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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