version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3126 76.50 +1 4286980..4291107 - 1375 162451395 - sce3123 - protein kinase 3127 73.15 0 4291350..4292336 - 328 162451396 - sce3124 - hypothetical protein 3128 57.53 -2 4292378..4292563 - 61 162451397 - sce3125 - hypothetical protein 3129 69.81 0 4292773..4293726 - 317 162451398 pp2c7 sce3126 - phosphoprotein phosphatase 3130 72.66 0 4294387..4296306 + 639 162451399 - sce3127 - hypothetical protein 3131 72.87 0 4296303..4299206 + 967 162451400 - sce3128 - hypothetical protein 3132 75.48 +1 4299324..4302080 + 918 162451401 mutS1 sce3129 - DNA mismatch repair protein 3133 72.35 0 4302091..4304148 - 685 162451402 - sce3130 - putative secreted protein 3134 71.32 0 4304145..4306613 - 822 162451404 - sce3131 - hypothetical protein 3135 70.01 0 4306612..4307448 + 278 162451403 rpsB sce3132 - hypothetical protein 3136 68.56 0 4307720..4308670 + 316 162451405 tsf sce3133 - elongation factor EF-Ts 3137 75.56 +1 4308680..4309624 + 314 162451406 - sce3134 - putative polysaccharide deacetylase family protein 3138 75.02 0 4310365..4311369 + 334 162451407 - sce3135 - hypothetical protein 3139 68.23 0 4311439..4311822 - 127 162451408 crcB sce3136 - crcB protein 3140 71.56 0 4311913..4313487 + 524 162451409 - sce3137 - hypothetical protein 3141 68.91 0 4313573..4314955 + 460 162451410 - sce3138 - hypothetical protein 3142 68.30 0 4313639..4314493 - 284 162451411 - sce3139 - putative ABC transporter, ATP-binding protein 3143 75.06 0 4314971..4315804 + 277 162451412 cheR5 sce3140 - chemotaxis protein methyltransferase 3144 73.72 0 4315824..4318685 + 953 162451413 glnD sce3141 - protein-PII uridylyltransferase 3145 71.72 0 4318682..4319749 + 355 162451414 - sce3142 - TPR repeat-containing protein 3146 72.08 0 4319767..4320672 - 301 162451415 parB sce3143 - chromosome partitioning protein ParB 3147 72.45 0 4320669..4321601 - 310 162451416 parA2 sce3144 - partition protein, ParA-like protein 3148 61.21 -2 4322156..4322320 + 54 162451417 - sce3145 - transcriptional regulator 3149 69.58 0 4322588..4323856 + 422 162451418 tig sce3146 - trigger factor 3150 64.65 -1 4324154..4324798 + 214 162451419 clpP2 sce3147 - endopeptidase Clp 3151 64.28 -1 4325281..4326537 + 418 162451420 clpX sce3148 - ATP-dependent protease ATP-binding subunit 3152 66.23 -1 4326749..4329241 + 830 162451421 lon3 sce3149 - endopeptidase LA 3153 71.32 0 4329289..4330857 + 522 162451422 purH sce3150 - IMP cyclohydrolase 3154 70.86 0 4331623..4332480 + 285 162451423 parA3 sce3151 - ATPase 3155 66.42 -1 4332608..4333006 + 132 162451424 - sce3152 - hypothetical protein 3156 66.67 -1 4333232..4333984 + 250 162451425 - sce3153 - hypothetical protein 3157 65.48 -1 4334174..4334680 - 168 162451426 - sce3154 - hypothetical protein 3158 72.23 0 4334885..4336483 + 532 162451427 - sce3155 - hypothetical protein 3159 77.19 +1 4336596..4338524 - 642 162451428 - sce3156 - putative secreted protein 3160 74.37 0 4338640..4340625 - 661 162451429 - sce3157 - molybdopterin-containing oxidoreductase catalytic subunit 3161 74.51 0 4340701..4341516 - 271 162451430 - sce3158 - hypothetical protein 3162 74.83 0 4341833..4342885 - 350 162451431 rluD2 sce3159 - pseudouridylate synthase/ribosomal large subunit pseudouridine synthase D 3163 71.19 0 4342973..4344187 - 404 162451432 - sce3160 - hypothetical protein 3164 71.20 0 4344381..4345835 + 484 162451433 glgA2 sce3161 - hypothetical protein 3165 76.31 +1 4345997..4346992 + 331 162451434 - sce3162 - hypothetical protein 3166 69.70 0 4346985..4347446 + 153 162451435 - sce3163 - hypothetical protein 3167 74.42 0 4347386..4348894 + 502 162451436 - sce3164 - hypothetical protein 3168 75.40 +1 4349127..4351049 + 640 162451437 - sce3165 - hypothetical protein 3169 73.65 0 4351283..4352713 + 476 162451438 - sce3166 - GTP-binding protein HflX 3170 77.53 +1 4352744..4353010 - 88 162451440 - sce3167 - hypothetical protein 3171 70.57 0 4352997..4353431 + 144 162451439 - sce3168 - hypothetical protein 3172 69.61 0 4353388..4354032 + 214 162451441 - sce3169 - hypothetical protein 3173 79.25 +2 4354228..4354974 - 248 162451442 - sce3170 - hypothetical protein 3174 74.02 0 4355488..4355895 + 135 162451443 - sce3171 - putative acyltransferase 3175 73.36 0 4356054..4357652 - 532 162451444 - sce3172 - hypothetical protein 3176 71.03 0 4358259..4359014 - 251 162451445 rpsA1 sce3173 - S1 RNA-binding domain-containing protein 3177 71.71 0 4360219..4360575 - 118 162451446 - sce3174 - hypothetical protein 3178 70.09 0 4360619..4361407 - 262 162451447 - sce3175 - hypothetical protein 3179 68.10 0 4361570..4362961 - 463 162451448 gatA3 sce3176 - putative amidase 3180 60.38 -2 4362976..4363341 - 121 162451449 - sce3177 - hypothetical protein 3181 74.49 0 4363371..4366706 - 1111 162451450 - sce3178 - hypothetical protein 3182 66.93 0 4366748..4367497 - 249 162451451 - sce3179 - polyketide biosynthesis enoyl-CoA hydratase 3183 67.44 0 4367499..4368275 - 258 162451452 - sce3180 - polyketide biosynthesis enoyl-CoA hydratase 3184 67.30 0 4368263..4369525 - 420 162451453 - sce3181 - hydroxymethylglutaryl-CoA synthase 3185 70.80 0 4369542..4370774 - 410 162451454 - sce3182 - polyketide beta-ketoacyl:acyl carrier protein synthase 3186 62.65 -2 4370752..4371000 - 82 162451455 acpP2 sce3183 - acyl carrier protein 3187 67.25 0 4371003..4372382 - 459 162451456 - sce3184 - hypothetical protein 3188 58.10 -2 4373490..4373804 + 104 162451457 - sce3185 - hypothetical protein 3189 68.08 0 4373801..4374718 + 305 162451458 fabD1 sce3186 - malonyl CoA-acyl carrier protein transacylase 3190 66.62 -1 4374706..4376670 + 654 162451459 asnB1 sce3187 - asparagine synthetase 3191 70.20 0 4376667..4392107 + 5146 162451460 - sce3188 - polyketide synthase 3192 71.70 0 4392104..4403590 + 3828 162451461 - sce3189 - polyketide synthase 3193 71.96 0 4403593..4414479 + 3628 162451462 - sce3190 - polyketide synthase 3194 71.83 0 4414476..4429688 + 5070 162451463 - sce3191 - polyketide synthase 3195 73.55 0 4429685..4440421 + 3578 162451464 - sce3192 - polyketide synthase 3196 72.09 0 4440441..4458362 + 5973 162451465 - sce3193 - polyketide synthase 3197 68.19 0 4458359..4459735 + 458 162451466 - sce3194 - MATE efflux family protein 3198 69.81 0 4459749..4461851 + 700 162451467 - sce3195 - malonyl CoA-acyl carrier protein transacylase 3199 69.56 0 4462166..4462891 + 241 162451468 - sce3196 - hypothetical protein 3200 68.05 0 4462937..4464595 + 552 162451469 - sce3197 - Rhs family carbohydrate-binding protein 3201 64.06 -1 4464779..4465315 + 178 162451470 - sce3198 - hypothetical protein 3202 75.59 +1 4465312..4468080 + 922 162451471 - sce3199 - hypothetical protein 3203 72.09 0 4468402..4469286 + 294 162451472 - sce3200 - hypothetical protein 3204 70.98 0 4469856..4470992 - 378 162451473 - sce3201 - hypothetical protein 3205 67.00 0 4470989..4471285 - 98 162451474 - sce3202 - hypothetical protein 3206 68.43 0 4471363..4473579 - 738 162451475 - sce3203 - hypothetical protein 3207 66.67 -1 4473920..4474441 + 173 162451476 - sce3204 - hypothetical protein 3208 73.10 0 4474428..4475360 + 310 162451477 - sce3205 - hypothetical protein 3209 70.66 0 4475353..4477380 + 675 162451478 - sce3206 - subtilisin like protease 3210 69.98 0 4477298..4479742 + 814 162451479 - sce3207 - two component sensor kinase 3211 70.03 0 4479739..4481226 + 495 162451480 - sce3208 - sigma-54 dependent DNA-binding response regulator 3212 66.51 -1 4481244..4482524 + 426 162451481 - sce3209 - WD-40 repeat-containing protein 3213 69.11 0 4482587..4487053 + 1488 162451482 - sce3210 - WD repeat-containing protein 3214 69.63 0 4487533..4488579 - 348 162451483 - sce3211 - hypothetical protein 3215 73.08 0 4488576..4489526 - 316 162451484 - sce3212 - hypothetical protein 3216 73.82 0 4490064..4491056 - 330 162451485 - sce3213 - hypothetical protein 3217 72.09 0 4491087..4491695 - 202 162451486 - sce3214 - TetR family transcriptional regulator 3218 65.50 -1 4491830..4492603 - 257 162451487 - sce3215 - hypothetical protein 3219 70.94 0 4492896..4494347 + 483 162451488 - sce3216 - hypothetical protein 3220 80.14 +2 4494358..4497690 + 1110 162451489 - sce3217 - serine/threonine-protein kinase 3221 78.11 +1 4497600..4499189 + 529 162451490 pilR1 sce3218 - nitrogen regulation protein NR(I) 3222 73.79 0 4499254..4500573 + 439 162451491 - sce3219 - hypothetical protein 3223 67.87 0 4500870..4502363 - 497 162451492 xynB1 sce3220 - endo-1,4-beta-glucanase 3224 72.28 0 4503079..4507587 + 1502 162451493 - sce3221 - protein kinase 3225 69.62 0 4507584..4508057 + 157 162451494 - sce3222 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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