version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2943 70.75 0 4030329..4030769 + 146 162451212 moaC sce2940 - putative molybdenum cofactor biosynthesis protein C 2944 76.22 +1 4030766..4031341 + 191 162451213 moaE sce2941 - molybdopterin-converting factor chain 2 2945 67.07 0 4031384..4032130 - 248 162451214 phoU sce2942 - phosphate transport system regulatory protein PhoU 2946 63.31 -1 4032130..4032993 - 287 162451215 pstB sce2943 - phosphate ABC transporter, ATP-binding protein PstB 2947 70.29 0 4033003..4033914 - 303 162451216 pstA sce2944 - phosphate ABC transporter, permease protein PstA 2948 67.89 0 4033911..4034894 - 327 162451217 pstC sce2945 - phosphate ABC transporter, permease protein PstC 2949 66.31 -1 4034975..4036084 - 369 162451218 pstS sce2946 - phosphate ABC transporter, substrate-binding protein PstS 2950 73.21 0 4036181..4037677 - 498 162451219 phoR1 sce2947 - phosphate sensory box histidine kinase PhoR 2951 69.11 0 4037685..4038380 - 231 162451220 phoB sce2948 - phosphate regulon transcriptional regulatory protein phoB 2952 68.51 0 4038713..4039147 + 144 162451221 ndk sce2949 - putative nucleoside diphosphate kinase 2953 78.75 +1 4039147..4040040 + 297 162451222 - sce2950 - hypothetical protein 2954 72.15 0 4040083..4040958 + 291 162451223 dapD sce2951 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 2955 74.37 0 4040955..4042058 + 367 162451224 dapE2 sce2952 - dipeptidase 2956 71.60 0 4042155..4043147 - 330 162451225 - sce2953 - histidine kinase 2957 67.83 0 4043400..4043828 - 142 162451226 - sce2954 - two-component response regulator 2958 68.82 0 4044057..4044521 - 154 162451227 - sce2955 - two-component response regulator 2959 74.57 0 4044877..4045698 + 273 162451228 - sce2956 - two-component system sensor protein 2960 74.61 0 4045864..4049928 + 1354 162451229 - sce2957 - hypothetical protein 2961 67.01 0 4050055..4052082 - 675 162451230 - sce2958 - putative secreted protein 2962 72.32 0 4052495..4052989 - 164 162451231 - sce2959 - putative secreted protein 2963 76.12 +1 4053280..4056114 + 944 162451232 - sce2960 - protein kinase 2964 69.85 0 4056180..4057685 + 501 162451233 - sce2961 - Na+-driven multidrug efflux pump 2965 72.80 0 4057705..4059774 - 689 162451234 - sce2962 - short chain dehydrogenase 2966 67.20 0 4059821..4061137 - 438 162451235 ahcY sce2963 - S-adenosyl-L-homocysteine hydrolase 2967 76.64 +1 4061127..4062239 - 370 162451236 - sce2964 - ArsR family transcriptional regulator 2968 71.99 0 4062506..4063801 - 431 162451237 - sce2965 - hypothetical protein 2969 68.26 0 4063798..4065615 - 605 162451238 nifM sce2966 - foldase protein prsA precursor 2970 65.49 -1 4065745..4066254 + 169 162451239 - sce2967 - hypothetical protein 2971 63.71 -1 4066524..4066760 + 78 162451240 - sce2968 - hypothetical protein 2972 72.07 0 4066888..4067313 + 141 162451241 - sce2969 - hypothetical protein 2973 74.36 0 4067324..4069417 + 697 162451242 yoaA sce2970 - ATP-dependent helicase 2974 70.95 0 4069500..4071110 - 536 162451243 - sce2971 - hypothetical protein 2975 74.41 0 4071332..4071925 + 197 162451244 - sce2972 - hypothetical protein 2976 71.31 0 4071922..4073559 + 545 162451245 - sce2973 - putative choline dehydrogenase 2977 72.45 0 4073778..4075592 + 604 162451246 - sce2974 - sigma-54 dependent DNA-binding response regulator 2978 72.87 0 4075839..4077338 + 499 162451247 - sce2975 - hypothetical protein 2979 74.42 0 4077671..4080649 + 992 162451248 - sce2976 - hypothetical protein 2980 70.73 0 4080654..4082228 - 524 162451249 - sce2977 - hypothetical protein 2981 71.78 0 4082360..4083043 - 227 162451250 - sce2978 - putative secreted protein 2982 59.68 -2 4083726..4084040 + 104 162451251 - sce2979 - hypothetical protein 2983 73.86 0 4083964..4084797 - 277 162451252 - sce2980 - hypothetical protein 2984 72.35 0 4084794..4086131 - 445 162451254 - sce2981 - hypothetical protein 2985 75.30 +1 4086114..4087376 + 420 162451253 - sce2982 - hypothetical protein 2986 70.32 0 4087381..4087983 - 200 162451255 apt sce2983 - putative adenine phosphoribosyltransferase 2987 73.62 0 4088025..4088801 - 258 162451256 surE1 sce2984 - acid phosphatase 2988 73.36 0 4088826..4090439 - 537 162451257 - sce2985 - putative succinate-semialdehyde dehydrogenase (NAD(P)(+)) 2989 75.96 +1 4090539..4092743 - 734 162451258 - sce2986 - hypothetical protein 2990 70.57 0 4092842..4094662 - 606 162451259 - sce2987 - hypothetical protein 2991 71.75 0 4095100..4096809 + 569 162451260 - sce2988 - outer membrane efflux protein 2992 72.40 0 4096983..4099199 + 738 162451261 rrpP sce2989 - membrane-bound proton-translocating pyrophosphatase 2993 70.64 0 4099199..4102624 + 1141 162451262 - sce2990 - hypothetical protein 2994 65.68 -1 4102790..4103398 - 202 162451263 aglS1 sce2991 - putative adventurous gliding motility protein 2995 65.43 -1 4103395..4103958 - 187 162451264 - sce2992 - TolR-like protein 2996 64.16 -1 4103962..4104639 - 225 162451265 aglR1 sce2993 - adventurous gliding motility protein R 2997 64.71 -1 4105598..4106260 + 220 162451266 aglR2 sce2994 - adventurous gliding motility protein R 2998 64.21 -1 4106487..4107056 + 189 162451267 - sce2995 - putative biopolymer transport protein 2999 63.73 -1 4107144..4107653 + 169 162451268 aglS2 sce2996 - putative adventurous gliding motility protein AglS 3000 71.24 0 4107844..4108848 + 334 162451269 - sce2997 - hypothetical protein 3001 78.19 +1 4108970..4110271 - 433 162451270 - sce2998 - hypothetical protein 3002 76.49 +1 4110268..4110990 - 240 162451271 - sce2999 - putative secreted protein 3003 70.65 0 4110990..4112321 - 443 162451272 - sce3000 - hypothetical protein 3004 73.82 0 4113260..4115398 + 712 162451273 - sce3001 - hypothetical protein 3005 72.65 0 4115681..4117402 + 573 162451274 - sce3002 - protein kinase 3006 75.00 0 4117442..4118125 - 227 162451275 mutH sce3003 - DNA mismatch repair protein 3007 76.05 +1 4118344..4121967 - 1207 162451276 - sce3004 - protein kinase 3008 75.00 0 4122387..4123586 + 399 162451277 - sce3005 - hypothetical protein 3009 68.69 0 4123615..4124553 - 312 162451278 - sce3006 - hypothetical protein 3010 69.18 0 4124650..4126398 + 582 162451279 pckA1 sce3007 - phosphoenolpyruvate carboxykinase 3011 66.31 -1 4126652..4127209 + 185 162451280 - sce3008 - hypothetical protein 3012 72.40 0 4127367..4128377 + 336 162451281 ispB sce3009 - trans-octaprenyltranstransferase 3013 76.24 +1 4128458..4129732 + 424 162451282 - sce3010 - putative 3-hydroxy-3-methylglutaryl-CoA reductase 3014 73.63 0 4129729..4130460 + 243 162451283 menG sce3011 - ubiquinone/menaquinone biosynthesis methyltransferase 3015 76.95 +1 4130491..4132338 + 615 162451284 menD sce3012 - 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 3016 75.57 +1 4132388..4133431 + 347 162451285 menA sce3013 - 1,4-dihydroxy-2-naphthoate octaprenyltransferase 3017 76.87 +1 4133437..4134504 + 355 162451286 menC sce3014 - putative O-succinylbenzoate synthase 3018 78.21 +1 4134492..4136051 + 519 162451287 menE sce3015 - o-succinylbenzoate-CoA ligase 3019 69.86 0 4136090..4136527 - 145 162451288 - sce3016 - hypothetical protein 3020 72.86 0 4136798..4137766 + 322 162451289 - sce3017 - hypothetical protein 3021 71.16 0 4137850..4138806 + 318 162451290 - sce3018 - hypothetical protein 3022 71.80 0 4138832..4140019 - 395 162451291 - sce3019 - hypothetical protein 3023 70.78 0 4140149..4140805 + 218 162451292 - sce3020 - hypothetical protein 3024 74.16 0 4140850..4143012 + 720 162451293 - sce3021 - protein kinase 3025 72.23 0 4143109..4144599 + 496 162451294 - sce3022 - hypothetical protein 3026 73.99 0 4144624..4145415 - 263 162451295 - sce3023 - hypothetical protein 3027 71.75 0 4145502..4146839 - 445 162451296 ndh2 sce3024 - NADH dehydrogenase 3028 61.54 -2 4147082..4147588 - 168 162451297 - sce3025 - hypothetical protein 3029 73.94 0 4147606..4147935 + 109 162451298 - sce3026 - hypothetical protein 3030 70.31 0 4147977..4148360 + 127 162451299 prrA sce3027 - hypothetical protein 3031 75.06 0 4148419..4150659 - 746 162451300 - sce3028 - protein kinase 3032 71.81 0 4150735..4152153 - 472 162451301 - sce3029 - aminotransferase 3033 65.07 -1 4152194..4154014 - 606 162451302 - sce3030 - hypothetical protein 3034 73.03 0 4154167..4154889 + 240 162451303 - sce3031 - hypothetical protein 3035 73.62 0 4155870..4156430 + 186 162451304 - sce3032 - hypothetical protein 3036 75.96 +1 4156484..4157398 + 304 162451305 - sce3033 - hypothetical protein 3037 67.59 0 4157646..4159049 + 467 162451306 xynA1 sce3034 - endo-1,4-beta-xylanase 3038 72.80 0 4159157..4160443 + 428 162451307 aroA1 sce3035 - 3-phosphoshikimate 1-carboxyvinyltransferase 3039 72.26 0 4160524..4161309 - 261 162451308 - sce3036 - hypothetical protein 3040 73.41 0 4161553..4162383 + 276 162451309 - sce3037 - hypothetical protein 3041 74.19 0 4162587..4164248 + 553 162451310 - sce3038 - L-aspartate oxidase (LASPO) 3042 73.51 0 4164245..4164580 + 111 162451311 - sce3039 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0