version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2860 76.72 +1 3899488..3900591 - 367 162451129 - sce2857 - mandelate racemase/muconate lactonizing enzyme family protein 2861 72.71 0 3900617..3901228 - 203 162451130 - sce2858 - ahpC/TSA family protein 2862 65.38 -1 3901249..3901716 - 155 162451131 fabZ sce2859 - (3R)-hydroxymyristoyl- 2863 67.00 0 3901758..3902354 - 198 162451132 - sce2860 - outer membrane protein, putative 2864 73.96 0 3902403..3903293 - 296 162451133 - sce2861 - dumpy 2865 73.38 0 3903599..3904774 - 391 162451134 argJ sce2862 - glutamate N-acetyltransferase 2866 68.83 0 3904910..3906526 + 538 162451135 - sce2863 - hypothetical protein 2867 75.26 +1 3906536..3907396 + 286 162451136 - sce2864 - hypothetical protein 2868 75.93 +1 3907564..3909678 + 704 162451137 - sce2865 - hypothetical protein 2869 70.98 0 3909758..3911218 + 486 162451138 - sce2866 - protein kinase 2870 71.09 0 3911390..3912745 + 451 162451139 - sce2867 - hypothetical protein 2871 62.69 -2 3913658..3914059 + 133 162451140 - sce2868 - putative secreted protein 2872 66.15 -1 3914994..3915962 + 322 162451141 - sce2869 - putative secreted protein 2873 72.47 0 3916014..3916823 - 269 162451142 - sce2870 - fumarylacetoacetase 2874 76.76 +1 3916959..3917582 - 207 162451143 - sce2871 - hypothetical protein 2875 76.23 +1 3917712..3918380 + 222 162451144 - sce2872 - hypothetical protein 2876 70.94 0 3918408..3919016 - 202 162451145 yihX sce2873 - haloacid dehalogenase-like hydrolase family protein 2877 70.25 0 3919356..3920555 + 399 162451146 - sce2874 - hypothetical protein 2878 75.26 +1 3920648..3921706 - 352 162451147 - sce2875 - phosphatidylinositol transfer protein, membrane-associated 2879 72.85 0 3921761..3922957 - 398 162451148 - sce2876 - putative hydroxylase 2880 72.26 0 3923075..3924523 - 482 162451149 - sce2877 - serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2881 67.17 0 3924636..3925433 - 265 162451150 - sce2878 - putative secreted protein 2882 73.45 0 3925779..3926486 - 235 162451151 - sce2879 - hypothetical protein 2883 66.75 -1 3926609..3927841 - 410 162451152 bioF1 sce2880 - 8-amino-7-oxononanoate synthase 2884 67.62 0 3928688..3930049 + 453 162451153 - sce2881 - sigma-54 dependent DNA-binding response regulator 2885 68.79 0 3930136..3931455 + 439 162451154 phoH1 sce2882 - PhoH family protein 2886 78.89 +1 3931552..3932664 + 370 162451155 - sce2883 - hypothetical protein 2887 68.08 0 3932972..3933184 + 70 162451156 - sce2884 - hypothetical protein 2888 77.61 +1 3933198..3935372 - 724 162451157 recQ sce2885 - ATP-dependent DNA helicase RecQ 2889 68.98 0 3935466..3936158 - 230 162451158 - sce2886 - hypothetical protein 2890 69.94 0 3936418..3936936 - 172 162451159 - sce2887 - hypothetical protein 2891 75.88 +1 3937411..3938007 - 198 162451160 fsxA sce2888 - membrane protein, FxsA-like 2892 69.84 0 3938243..3939787 + 514 162451161 kamD sce2889 - Beta-lysine 5,6-aminomutase, alpha subunit 2893 72.97 0 3939816..3940307 + 163 162451162 - sce2890 - hypothetical protein 2894 69.12 0 3940625..3941359 + 244 162451163 kamE sce2891 - Beta-lysine 5,6-aminomutase, beta subunit 2895 78.55 +1 3941364..3942137 - 257 162451164 - sce2892 - DnaJ molecular chaperone 2896 68.68 0 3942391..3943236 + 281 162451165 - sce2893 - putative short-chain dehydrogenases 2897 73.39 0 3943500..3945254 + 584 162451166 - sce2894 - Putetive secreted protein 2898 68.65 0 3945299..3945802 + 167 162451167 - sce2895 - hypothetical protein 2899 77.75 +1 3945822..3947039 + 405 162451168 - sce2896 - hypothetical protein 2900 69.02 0 3947236..3948126 + 296 162451169 - sce2897 - hypothetical protein 2901 70.77 0 3948492..3949490 + 332 162451170 ctaB sce2898 - Protoheme IX farnesyltransferase 2902 71.16 0 3949543..3950277 + 244 162451171 - sce2899 - lipoprotein 2903 79.07 +1 3950294..3954799 - 1501 162451172 - sce2900 - protein kinase 2904 72.48 0 3954841..3955614 - 257 162451173 - sce2901 - hypothetical protein 2905 67.78 0 3955692..3956588 + 298 162451174 - sce2902 - GGDEF domain-containing protein 2906 70.32 0 3958176..3959624 - 482 162451175 - sce2903 - cytochrome c family protein 2907 70.67 0 3959636..3961360 - 574 162451176 - sce2904 - hypothetical protein 2908 66.67 -1 3961540..3962301 - 253 162451177 - sce2905 - hypothetical protein 2909 66.44 -1 3962573..3963451 - 292 162451178 - sce2906 - hypothetical protein 2910 62.57 -2 3963525..3964451 - 308 162451179 - sce2907 - hypothetical protein 2911 71.51 0 3964875..3966236 - 453 162451180 ftsY sce2908 - cell division membrane protein 2912 76.97 +1 3966381..3968156 - 591 162451181 - sce2909 - hypothetical protein 2913 67.42 0 3968508..3969431 + 307 162451182 cpcE sce2910 - hypothetical protein 2914 67.36 0 3969508..3970377 + 289 162451183 - sce2911 - hypothetical protein 2915 76.52 +1 3970618..3971175 - 185 162451184 - sce2912 - hypothetical protein 2916 69.25 0 3971183..3972034 - 283 162451185 - sce2913 - hypothetical protein 2917 65.20 -1 3972663..3974369 + 568 162451186 - sce2914 - hypothetical protein 2918 65.89 -1 3974455..3978324 + 1289 162451187 ybgF sce2915 - hypothetical protein 2919 66.33 -1 3978324..3979817 + 497 162451188 - sce2916 - hypothetical protein 2920 66.67 -1 3980312..3980584 + 90 162451189 - sce2917 - hypothetical protein 2921 69.21 0 3980675..3982720 + 681 162451190 - sce2918 - FHA domain-containing protein 2922 64.75 -1 3983248..3984135 + 295 162451191 - sce2919 - TPR repeat-containing protein 2923 69.88 0 3984212..3989536 + 1774 162451192 - sce2920 - TPR repeat-containing protein 2924 67.98 0 3989487..3995732 + 2081 162451193 - sce2921 - TPR repeat-containing protein 2925 69.60 0 3995922..3997556 + 544 162451194 - sce2922 - protein kinase 2926 76.10 +1 3997605..4001495 - 1296 162451195 - sce2923 - protein kinase 2927 75.00 0 4001874..4003409 + 511 162451196 - sce2924 - hypothetical protein 2928 76.90 +1 4003406..4004314 + 302 162451197 - sce2925 - hypothetical protein 2929 73.31 0 4004419..4006134 + 571 162451198 - sce2926 - hypothetical protein 2930 80.04 +2 4006774..4009218 - 814 162451199 - sce2927 - hypothetical protein 2931 71.86 0 4009326..4009922 - 198 162451200 - sce2928 - hypothetical protein 2932 69.75 0 4009943..4011598 - 551 162451201 - sce2929 - hypothetical protein 2933 73.77 0 4011633..4013336 + 567 162451202 - sce2930 - hypothetical protein 2934 71.79 0 4013333..4014697 + 454 162451203 - sce2931 - hypothetical protein 2935 71.08 0 4015113..4016765 + 550 162451204 - sce2932 - hypothetical protein 2936 77.82 +1 4016812..4017528 - 238 162451205 - sce2933 - hypothetical protein 2937 75.70 +1 4018076..4021663 + 1195 162451206 - sce2934 - protein kinase 2938 72.00 0 4021675..4023681 - 668 162451207 - sce2935 - positive regulator of sigma-B 2939 70.27 0 4024172..4024864 + 230 162451208 - sce2936 - hypothetical protein 2940 74.99 0 4025082..4028627 - 1181 162451209 - sce2937 - protein kinase 2941 68.24 0 4028774..4029028 + 84 162451210 moaD sce2938 - molybdopterin converting factor, subunit 1:MoaD 2942 73.98 0 4029054..4030175 + 373 162451211 moaA3 sce2939 - hypothetical protein 2943 70.75 0 4030329..4030769 + 146 162451212 moaC sce2940 - putative molybdenum cofactor biosynthesis protein C 2944 76.22 +1 4030766..4031341 + 191 162451213 moaE sce2941 - molybdopterin-converting factor chain 2 2945 67.07 0 4031384..4032130 - 248 162451214 phoU sce2942 - phosphate transport system regulatory protein PhoU 2946 63.31 -1 4032130..4032993 - 287 162451215 pstB sce2943 - phosphate ABC transporter, ATP-binding protein PstB 2947 70.29 0 4033003..4033914 - 303 162451216 pstA sce2944 - phosphate ABC transporter, permease protein PstA 2948 67.89 0 4033911..4034894 - 327 162451217 pstC sce2945 - phosphate ABC transporter, permease protein PstC 2949 66.31 -1 4034975..4036084 - 369 162451218 pstS sce2946 - phosphate ABC transporter, substrate-binding protein PstS 2950 73.21 0 4036181..4037677 - 498 162451219 phoR1 sce2947 - phosphate sensory box histidine kinase PhoR 2951 69.11 0 4037685..4038380 - 231 162451220 phoB sce2948 - phosphate regulon transcriptional regulatory protein phoB 2952 68.51 0 4038713..4039147 + 144 162451221 ndk sce2949 - putative nucleoside diphosphate kinase 2953 78.75 +1 4039147..4040040 + 297 162451222 - sce2950 - hypothetical protein 2954 72.15 0 4040083..4040958 + 291 162451223 dapD sce2951 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 2955 74.37 0 4040955..4042058 + 367 162451224 dapE2 sce2952 - dipeptidase 2956 71.60 0 4042155..4043147 - 330 162451225 - sce2953 - histidine kinase 2957 67.83 0 4043400..4043828 - 142 162451226 - sce2954 - two-component response regulator 2958 68.82 0 4044057..4044521 - 154 162451227 - sce2955 - two-component response regulator 2959 74.57 0 4044877..4045698 + 273 162451228 - sce2956 - two-component system sensor protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0