version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2797 71.98 0 3812435..3814147 - 570 162451066 - sce2794 - putative secreted protein 2798 68.94 0 3814204..3815523 - 439 162451067 - sce2795 - hypothetical protein 2799 67.65 0 3815748..3816152 - 134 162451068 - sce2796 - hypothetical protein 2800 70.09 0 3816300..3817058 - 252 162451069 - sce2797 - hypothetical protein 2801 74.02 0 3817147..3818343 - 398 162451070 - sce2798 - protein kinase 2802 74.53 0 3818419..3819156 + 245 162451071 - sce2799 - hypothetical protein 2803 67.34 0 3819490..3820530 + 346 162451072 - sce2800 - hypothetical protein 2804 66.18 -1 3820778..3822019 - 413 162451073 - sce2801 - hypothetical protein 2805 77.59 +1 3822283..3826776 + 1497 162451074 lhr1 sce2802 - putative ATP-dependent helicase, N-terminal fragment 2806 70.95 0 3826993..3827997 + 334 162451075 - sce2803 - putative secreted protein 2807 73.76 0 3828164..3829432 + 422 162451076 arcA sce2804 - RND family efflux transporter MFP subunit 2808 70.95 0 3829434..3832751 + 1105 162451077 acrB sce2805 - hypothetical protein 2809 74.05 0 3832779..3833171 - 130 162451078 - sce2806 - hypothetical protein 2810 70.18 0 3833284..3834252 + 322 162451079 - sce2807 - hypothetical protein 2811 75.38 +1 3834873..3836192 - 439 162451080 yieA sce2808 - lysine--tRNA ligase 2812 69.67 0 3836428..3838689 + 753 162451081 - sce2809 - hypothetical protein 2813 75.96 +1 3838842..3839336 - 164 162451082 - sce2810 - putative secreted protein 2814 68.49 0 3839381..3840037 - 218 162451083 - sce2811 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2815 75.57 +1 3840027..3841700 - 557 162451084 - sce2812 - hypothetical protein 2816 76.58 +1 3841738..3842463 - 241 162451085 hisA sce2813 - phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 2817 76.02 +1 3842547..3843551 - 334 162451086 - sce2814 - hypothetical protein 2818 74.89 0 3843616..3845148 - 510 162451087 - sce2815 - protein kinase 2819 72.21 0 3845385..3846377 - 330 162451088 - sce2816 - hypothetical protein 2820 69.26 0 3846824..3847555 + 243 162451089 - sce2817 - hypothetical protein 2821 68.12 0 3847573..3848121 + 182 162451090 - sce2818 - putative nucleoside-triphosphatase 2822 66.39 -1 3848349..3849446 + 365 162451091 - sce2819 - putative oxidoreductase 2823 72.53 0 3849522..3850289 + 255 162451092 - sce2820 - hypothetical protein 2824 68.13 0 3850366..3850842 - 158 162451093 - sce2821 - hypothetical protein 2825 74.32 0 3851224..3852177 + 317 162451094 - sce2822 - sensory transduction histidine kinase 2826 74.04 0 3852197..3852874 - 225 162451095 hisH sce2823 - amidotransferase 2827 68.55 0 3852878..3853567 - 229 162451096 hisB sce2824 - hypothetical protein 2828 75.88 +1 3853634..3855250 + 538 162451097 - sce2825 - protein kinase 2829 73.03 0 3855247..3856362 + 371 162451098 - sce2826 - hypothetical protein 2830 72.83 0 3856359..3857267 + 302 162451099 - sce2827 - putative secreted protein 2831 73.74 0 3857756..3857854 + 32 162451100 - sce2828 - hypothetical protein 2832 71.66 0 3858063..3858623 + 186 162451101 - sce2829 - hypothetical protein 2833 69.08 0 3858620..3858868 + 82 162451102 - sce2830 - hypothetical protein 2834 68.93 0 3859809..3860957 - 382 162451103 - sce2831 - hypothetical protein 2835 71.97 0 3862560..3863408 + 282 162451104 - sce2832 - hypothetical protein 2836 75.08 0 3863427..3865541 - 704 162451105 - sce2833 - hypothetical protein 2837 75.80 +1 3865612..3867516 - 634 162451106 mopB2 sce2834 - hypothetical protein 2838 76.06 +1 3867548..3868558 + 336 162451107 - sce2835 - hypothetical protein 2839 74.91 0 3868558..3870522 + 654 162451108 - sce2836 - hypothetical protein 2840 74.42 0 3870589..3871452 + 287 162451109 - sce2837 - hypothetical protein 2841 70.14 0 3871505..3873919 + 804 162451110 lon2 sce2838 - ATP-dependent protease La 2842 78.39 +1 3873990..3878033 - 1347 162451111 - sce2839 - exodeoxyribonuclease V beta chain 2843 79.41 +2 3878030..3881167 - 1045 162451112 - sce2840 - hypothetical protein 2844 72.32 0 3881690..3882520 - 276 162451113 - sce2841 - hypothetical protein 2845 71.15 0 3882688..3883623 - 311 162451115 - sce2842 - hypothetical protein 2846 68.99 0 3883517..3884935 + 472 162451114 - sce2843 - putative secreted protein 2847 73.74 0 3885056..3886285 + 409 162451116 - sce2844 - hypothetical protein 2848 69.62 0 3886362..3887747 - 461 162451117 - sce2845 - IS4 family transposase 2849 74.72 0 3887952..3888920 - 322 162451118 ctaA sce2846 - cytochrome aa3 controlling protein 2850 70.75 0 3889141..3890316 + 391 162451119 - sce2847 - response regulator/GGDEF domain-containing protein 2851 76.02 +1 3890339..3891802 + 487 162451120 - sce2848 - hypothetical protein 2852 71.05 0 3891886..3893277 + 463 162451121 - sce2849 - outer membrane efflux protein 2853 68.81 0 3893431..3894222 + 263 162451122 - sce2850 - heme exporter protein C 2854 67.74 0 3894227..3894505 + 92 162451123 - sce2851 - hypothetical protein 2855 65.97 -1 3894505..3894648 + 47 162451124 - sce2852 - hypothetical protein 2856 66.49 -1 3894728..3895867 + 379 162451125 - sce2853 - Acyl-CoA dehydrogenase 2857 71.84 0 3895890..3896855 - 321 162451126 - sce2854 - hypothetical protein 2858 72.95 0 3897592..3898800 + 402 162451127 pp2c5 sce2855 - phosphoprotein phosphatase 2859 76.31 +1 3898797..3899522 + 241 162451128 yqcB sce2856 - pseudouridylate synthase/tRNA pseudouridine synthase C 2860 76.72 +1 3899488..3900591 - 367 162451129 - sce2857 - mandelate racemase/muconate lactonizing enzyme family protein 2861 72.71 0 3900617..3901228 - 203 162451130 - sce2858 - ahpC/TSA family protein 2862 65.38 -1 3901249..3901716 - 155 162451131 fabZ sce2859 - (3R)-hydroxymyristoyl- 2863 67.00 0 3901758..3902354 - 198 162451132 - sce2860 - outer membrane protein, putative 2864 73.96 0 3902403..3903293 - 296 162451133 - sce2861 - dumpy 2865 73.38 0 3903599..3904774 - 391 162451134 argJ sce2862 - glutamate N-acetyltransferase 2866 68.83 0 3904910..3906526 + 538 162451135 - sce2863 - hypothetical protein 2867 75.26 +1 3906536..3907396 + 286 162451136 - sce2864 - hypothetical protein 2868 75.93 +1 3907564..3909678 + 704 162451137 - sce2865 - hypothetical protein 2869 70.98 0 3909758..3911218 + 486 162451138 - sce2866 - protein kinase 2870 71.09 0 3911390..3912745 + 451 162451139 - sce2867 - hypothetical protein 2871 62.69 -2 3913658..3914059 + 133 162451140 - sce2868 - putative secreted protein 2872 66.15 -1 3914994..3915962 + 322 162451141 - sce2869 - putative secreted protein 2873 72.47 0 3916014..3916823 - 269 162451142 - sce2870 - fumarylacetoacetase 2874 76.76 +1 3916959..3917582 - 207 162451143 - sce2871 - hypothetical protein 2875 76.23 +1 3917712..3918380 + 222 162451144 - sce2872 - hypothetical protein 2876 70.94 0 3918408..3919016 - 202 162451145 yihX sce2873 - haloacid dehalogenase-like hydrolase family protein 2877 70.25 0 3919356..3920555 + 399 162451146 - sce2874 - hypothetical protein 2878 75.26 +1 3920648..3921706 - 352 162451147 - sce2875 - phosphatidylinositol transfer protein, membrane-associated 2879 72.85 0 3921761..3922957 - 398 162451148 - sce2876 - putative hydroxylase 2880 72.26 0 3923075..3924523 - 482 162451149 - sce2877 - serine (or cysteine) proteinase inhibitor, clade B (ovalbumin), member 2881 67.17 0 3924636..3925433 - 265 162451150 - sce2878 - putative secreted protein 2882 73.45 0 3925779..3926486 - 235 162451151 - sce2879 - hypothetical protein 2883 66.75 -1 3926609..3927841 - 410 162451152 bioF1 sce2880 - 8-amino-7-oxononanoate synthase 2884 67.62 0 3928688..3930049 + 453 162451153 - sce2881 - sigma-54 dependent DNA-binding response regulator 2885 68.79 0 3930136..3931455 + 439 162451154 phoH1 sce2882 - PhoH family protein 2886 78.89 +1 3931552..3932664 + 370 162451155 - sce2883 - hypothetical protein 2887 68.08 0 3932972..3933184 + 70 162451156 - sce2884 - hypothetical protein 2888 77.61 +1 3933198..3935372 - 724 162451157 recQ sce2885 - ATP-dependent DNA helicase RecQ 2889 68.98 0 3935466..3936158 - 230 162451158 - sce2886 - hypothetical protein 2890 69.94 0 3936418..3936936 - 172 162451159 - sce2887 - hypothetical protein 2891 75.88 +1 3937411..3938007 - 198 162451160 fsxA sce2888 - membrane protein, FxsA-like 2892 69.84 0 3938243..3939787 + 514 162451161 kamD sce2889 - Beta-lysine 5,6-aminomutase, alpha subunit 2893 72.97 0 3939816..3940307 + 163 162451162 - sce2890 - hypothetical protein 2894 69.12 0 3940625..3941359 + 244 162451163 kamE sce2891 - Beta-lysine 5,6-aminomutase, beta subunit 2895 78.55 +1 3941364..3942137 - 257 162451164 - sce2892 - DnaJ molecular chaperone 2896 68.68 0 3942391..3943236 + 281 162451165 - sce2893 - putative short-chain dehydrogenases 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.