version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2698 68.38 0 3663598..3664530 + 310 162450967 - sce2695 - anti-anti sigma factor protein 2699 75.56 +1 3664556..3664690 + 44 162450968 - sce2696 - hypothetical protein 2700 73.26 0 3664696..3664953 + 85 162450969 - sce2697 - hypothetical protein 2701 72.67 0 3664950..3665765 + 271 162450970 - sce2698 - hypothetical protein 2702 68.25 0 3666142..3666582 + 146 162450971 - sce2699 - hypothetical protein 2703 73.74 0 3666579..3667412 + 277 162450972 - sce2700 - putative SAM-dependent methyltransferase 2704 71.20 0 3667580..3669586 + 668 162450973 - sce2701 - Rhs element Vgr protein 2705 72.55 0 3669606..3669962 + 118 162450974 - sce2702 - hypothetical protein 2706 73.31 0 3669959..3670801 + 280 162450975 - sce2703 - FHA domain-containing protein 2707 74.91 0 3670820..3673171 - 783 162450976 - sce2704 - hypothetical protein 2708 77.06 +1 3673236..3673793 - 185 162450977 - sce2705 - hypothetical protein 2709 72.16 0 3673850..3674395 + 181 162450978 - sce2706 - hypothetical protein 2710 61.33 -2 3674689..3675231 + 180 162450979 - sce2707 - hypothetical protein 2711 73.33 0 3676026..3676850 + 274 162450980 - sce2708 - hypothetical protein 2712 77.05 +1 3677052..3677234 + 60 162450981 - sce2709 - hypothetical protein 2713 69.03 0 3678374..3678796 + 140 162450982 rnk sce2710 - regulator of nucleoside diphosphate kinase 2714 73.46 0 3678911..3679720 - 269 162450983 - sce2711 - putative SAM-dependent methyltransferase 2715 69.41 0 3679883..3680356 - 157 162450984 - sce2712 - hypothetical protein 2716 74.27 0 3680739..3682238 + 499 162450985 - sce2713 - hypothetical protein 2717 68.52 0 3682257..3683120 - 287 162450986 - sce2714 - positive regulator of sigma-B 2718 69.56 0 3683267..3683785 + 172 162450987 epi sce2715 - methylmalonyl-CoA epimerase 2719 71.31 0 3683778..3686426 + 882 162450988 mcm sce2716 - methylmalonyl-CoA mutase 2720 73.41 0 3686428..3687420 + 330 162450989 meaB sce2717 - methylmalonyl-CoA mutase component 2721 67.85 0 3687514..3688695 + 393 162450990 - sce2718 - hypothetical protein 2722 74.37 0 3688740..3691142 + 800 162450991 - sce2719 - hypothetical protein 2723 74.43 0 3691139..3692878 + 579 162450992 - sce2720 - hypothetical protein 2724 72.93 0 3692904..3693446 + 180 162450993 - sce2721 - hypothetical protein 2725 73.65 0 3693477..3694478 + 333 162450994 ctpA1 sce2722 - carboxyl-terminal protease 2726 69.05 0 3694496..3696631 - 711 162450995 - sce2723 - hypothetical protein 2727 77.86 +1 3697260..3698420 + 386 162450996 - sce2724 - hypothetical protein 2728 75.72 +1 3698700..3699671 + 323 162450997 - sce2725 - phosphotransferase 2729 79.08 +1 3699748..3700029 + 93 162450998 - sce2726 - hypothetical protein 2730 76.87 +1 3700026..3703034 + 1002 162450999 - sce2727 - two-component system sensor protein 2731 65.87 -1 3703356..3704735 + 459 162451000 mtbA sce2728 - major facilitator superfamily permease/putative sugar transporter 2732 67.57 0 3705521..3707065 + 514 162451001 - sce2729 - hypothetical protein 2733 73.55 0 3707518..3711849 - 1443 162451002 - sce2730 - protein kinase 2734 66.19 -1 3712236..3713708 + 490 162451003 - sce2731 - hypothetical protein 2735 60.71 -2 3713858..3716407 - 849 162451004 - sce2732 - putative cell surface protein 2736 73.36 0 3716799..3719366 - 855 162451005 - sce2733 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 2737 73.60 0 3719363..3720862 - 499 162451006 ubiE2 sce2734 - ubiquinone/menaquinone biosynthesis methyltransferase ubiE 2738 70.24 0 3720988..3721491 + 167 162451007 - sce2735 - hypothetical protein 2739 73.26 0 3721493..3722857 + 454 162451008 czcB1 sce2736 - CzcB family heavy metal efflux protein 2740 71.68 0 3722868..3725999 + 1043 162451009 czcA1 sce2737 - CzcA family cobalt/zinc/cadmium efflux transporter permease 2741 75.13 0 3726003..3726581 + 192 162451010 tlpA sce2738 - thiol:disulfide interchange protein tlpA 2742 73.30 0 3726594..3728162 - 522 162451011 - sce2739 - PE_PGRS family protein 2743 77.94 +1 3728315..3729547 - 410 162451012 - sce2740 - hypothetical protein 2744 68.72 0 3729716..3731614 + 632 162451013 - sce2741 - hypothetical protein 2745 73.56 0 3731667..3732710 - 347 162451014 - sce2742 - hypothetical protein 2746 67.31 0 3733714..3736512 + 932 162451015 - sce2743 - putative secreted protein 2747 79.69 +2 3736825..3738198 - 457 162451016 - sce2744 - mucin 2748 73.44 0 3738191..3738928 - 245 162451017 - sce2745 - RNA polymerase sigma factor 2749 73.67 0 3739094..3744235 + 1713 162451018 - sce2746 - protein kinase 2750 71.56 0 3744256..3744807 - 183 162451019 - sce2747 - hypothetical protein 2751 77.49 +1 3744928..3747237 + 769 162451020 - sce2748 - hypothetical protein 2752 71.99 0 3747303..3747659 + 118 162451021 - sce2749 - hypothetical protein 2753 68.79 0 3747672..3748190 + 172 162451022 - sce2750 - hypothetical protein 2754 67.80 0 3748228..3748935 - 235 162451023 - sce2751 - putative secreted protein 2755 72.80 0 3750055..3751341 - 428 162451024 - sce2752 - hypothetical protein 2756 74.98 0 3751338..3755822 - 1494 162451025 - sce2753 - protein kinase 2757 67.36 0 3756321..3758054 + 577 162451026 - sce2754 - putative oxidoreductase 2758 63.51 -1 3758095..3758379 + 94 162451027 fdxE sce2755 - putative ferredoxin 2759 76.31 +1 3758401..3759396 + 331 162451028 - sce2756 - hypothetical protein 2760 69.79 0 3759401..3760840 + 479 162451029 - sce2757 - ABC transporter, substrate binding protein 2761 73.38 0 3760837..3761760 + 307 162451030 - sce2758 - putative ABC transporter permease protein 2762 74.20 0 3761757..3762605 + 282 162451031 - sce2759 - ABC transporter ATP-binding protein 2763 70.66 0 3762736..3763161 + 141 162451032 - sce2760 - hypothetical protein 2764 71.95 0 3763394..3765778 + 794 162451033 - sce2761 - two-component sensor histidine kinase 2765 72.91 0 3766104..3767912 + 602 162451034 - sce2762 - putative membrane bound zinc metallopeptidase 2766 76.17 +1 3768415..3769551 + 378 162451035 - sce2763 - putative D-alanine--D-alanine ligase A 2767 75.78 +1 3769548..3770930 + 460 162451036 - sce2764 - hypothetical protein 2768 72.51 0 3770975..3772018 - 347 162451038 - sce2765 - serine/threonine protein kinase 2769 70.22 0 3772017..3772607 + 196 162451037 - sce2766 - hypothetical protein 2770 73.60 0 3773346..3774239 + 297 162451039 - sce2767 - protein kinase 2771 68.64 0 3774249..3775463 - 404 162451040 - sce2768 - putative secreted protein 2772 65.77 -1 3775712..3776824 + 370 162451041 adh2 sce2769 - class III alcohol dehydrogenase 2773 74.40 0 3777016..3778593 + 525 162451042 pepA2 sce2770 - putative aminopeptidase 2774 68.10 0 3779025..3779513 + 162 162451043 - sce2771 - hypothetical protein 2775 70.96 0 3779629..3781350 - 573 162451044 - sce2772 - hypothetical protein 2776 74.50 0 3781383..3782276 - 297 162451045 - sce2773 - LysR family transcriptional regulator 2777 71.58 0 3782411..3783652 - 413 162451046 - sce2774 - hypothetical protein 2778 77.80 +1 3783730..3788310 - 1526 162451047 - sce2775 - hypothetical protein 2779 67.25 0 3788531..3788872 + 113 162451048 - sce2776 - hypothetical protein 2780 69.82 0 3788900..3789787 - 295 162451049 dam sce2777 - site-specific DNA-methyltransferase 2781 75.62 +1 3790343..3791314 + 323 162451050 - sce2778 - hypothetical protein 2782 75.53 +1 3791365..3792075 - 236 162451051 - sce2779 - mutT/nudix family protein 2783 64.65 -1 3793044..3793340 + 98 162451052 - sce2780 - GroES-like protein 2784 69.15 0 3793409..3795097 + 562 162451053 - sce2781 - GroEL like chaperone 2785 67.73 0 3795198..3795950 + 250 162451054 - sce2782 - hypothetical protein 2786 69.66 0 3795955..3796722 + 255 162451055 pdeX sce2783 - 3',5'-cyclic-nucleotide phosphodiesterase 2787 66.91 0 3796974..3797792 - 272 162451056 pp2c4 sce2784 - phosphoprotein phosphatase 2788 76.98 +1 3798031..3799668 - 545 162451057 - sce2785 - hypothetical protein 2789 70.84 0 3799673..3801277 - 534 162451058 speE1 sce2786 - spermidine synthase 2790 72.03 0 3801385..3802857 + 490 162451059 - sce2787 - putative secreted protein 2791 66.38 -1 3803126..3803476 + 116 162451060 - sce2788 - hypothetical protein 2792 76.06 +1 3803633..3804739 + 368 162451061 - sce2789 - hypothetical protein 2793 78.36 +1 3805279..3806706 + 475 162451062 - sce2790 - subtilisin-like serine protease 2794 73.22 0 3806916..3809279 + 787 162451063 - sce2791 - sensor histidine kinase 2795 73.25 0 3809276..3810886 + 536 162451064 - sce2792 - sigma-54 dependent DNA-binding response regulator 2796 68.97 0 3810948..3812249 - 433 162451065 rkpK sce2793 - hypothetical protein 2797 71.98 0 3812435..3814147 - 570 162451066 - sce2794 - putative secreted protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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