version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2574 74.71 0 3466011..3471356 + 1781 162450843 uvrA1 sce2571 - excinuclease ABC subunit A 2575 64.22 -1 3471402..3471605 - 67 162450844 - sce2572 - hypothetical protein 2576 78.43 +1 3471768..3472277 + 169 162450845 - sce2573 - hypothetical protein 2577 73.45 0 3472749..3474827 - 692 162450846 - sce2574 - protein kinase 2578 73.12 0 3475154..3476005 + 283 162450847 nadC sce2575 - nicotinate-nucleotide diphosphorylase (carboxylating) 2579 76.64 +1 3476002..3476823 + 273 162450848 birA sce2576 - biotin-(acetyl-CoA-carboxylase) ligase 2580 69.88 0 3476940..3477593 + 217 162450849 - sce2577 - radical activating enzyme 2581 67.53 0 3477657..3478700 - 347 162450850 fbp2 sce2578 - fructose-bisphosphatase 2582 67.85 0 3479011..3479937 + 308 162450851 fba2 sce2579 - fructose-bisphosphate aldolase 2583 69.63 0 3480260..3481744 + 494 162450852 pepA1 sce2580 - hypothetical protein 2584 68.08 0 3481748..3482599 + 283 162450853 - sce2581 - putative ATPase 2585 75.92 +1 3482609..3483451 + 280 162450854 - sce2582 - hypothetical protein 2586 73.98 0 3483725..3484708 + 327 162450855 ppiC sce2583 - hypothetical protein 2587 71.41 0 3484705..3485358 + 217 162450856 - sce2584 - hypothetical protein 2588 70.42 0 3491772..3494060 + 762 162450857 mtgA sce2585 - monofunctional biosynthetic peptidoglycan transglycosylase 2589 71.35 0 3494085..3494618 - 177 162450858 cumB sce2586 - putative zinc-binding hydrolase 2590 71.01 0 3496487..3496969 + 160 162450859 resA1 sce2587 - Thiol-disulfide oxidoreductase resA. 2591 74.79 0 3497008..3498411 + 467 162450860 - sce2588 - hypothetical protein 2592 69.47 0 3498428..3499960 + 510 162450861 - sce2589 - Acetyl-CoA carboxylase 2593 74.26 0 3500050..3502485 + 811 162450862 - sce2590 - subtilisin like protease 2594 74.15 0 3502613..3503881 + 422 162450863 - sce2591 - putative aminotransferase 2595 74.18 0 3503868..3505544 - 558 162450864 - sce2592 - Piccolo protein 2596 71.75 0 3505639..3505992 - 117 162450865 - sce2593 - hypothetical protein 2597 67.76 0 3505994..3506728 - 244 162450866 - sce2594 - hypothetical protein 2598 73.67 0 3507054..3509222 - 722 162450867 - sce2595 - autotransporter 2599 74.07 0 3509306..3511033 - 575 162450868 - sce2596 - hypothetical protein 2600 66.42 -1 3511252..3511659 + 135 162450869 - sce2597 - hypothetical protein 2601 69.72 0 3511738..3512064 - 108 162450870 - sce2598 - stigma-specific Stig1 family protein 2602 69.97 0 3512409..3513134 - 241 162450871 - sce2599 - hypothetical protein 2603 76.52 +1 3513247..3514251 + 334 162450872 fabH2 sce2600 - 3-oxoacyl-(acyl-carrier-protein) synthase III 2604 68.18 0 3514431..3516617 + 728 162450873 bglX sce2601 - Beta-glucosidase 2605 71.31 0 3516781..3517641 + 286 162450874 fabG5 sce2602 - 3-oxoacyl-[acyl-carrier-protein] reductase 2606 64.68 -1 3517849..3519258 - 469 162450875 - sce2603 - hypothetical protein 2607 74.37 0 3519643..3520239 - 198 162450876 - sce2604 - hypothetical protein 2608 68.89 0 3520523..3521287 + 254 162450877 - sce2605 - hypothetical protein 2609 67.79 0 3521381..3523786 - 801 162450878 - sce2606 - hypothetical protein 2610 74.36 0 3523972..3525375 + 467 162450879 - sce2607 - hypothetical protein 2611 74.58 0 3525372..3525611 + 79 162450880 - sce2608 - hypothetical protein 2612 72.46 0 3525915..3526673 + 252 162450881 fabG6 sce2609 - 3-oxoacyl-[acyl-carrier-protein] reductase 2613 71.49 0 3526772..3527767 + 331 162450882 - sce2610 - putative oxidoreductase 2614 74.86 0 3527804..3529195 - 463 162450883 - sce2611 - RNA polymerase sigma factor 2615 73.67 0 3529460..3531058 - 532 162450884 - sce2612 - hypothetical protein 2616 71.82 0 3531285..3531827 + 180 162450885 - sce2613 - hypothetical protein 2617 73.69 0 3532150..3534270 + 706 162450886 - sce2614 - hypothetical protein 2618 74.46 0 3534267..3534869 + 200 162450887 - sce2615 - hypothetical protein 2619 64.55 -1 3535291..3535668 + 125 162450888 - sce2616 - hypothetical protein 2620 70.65 0 3535661..3538144 + 827 162450889 - sce2617 - LacI family transcriptional regulator 2621 68.40 0 3538165..3539436 - 423 162450890 codB sce2618 - putative cytosine permease 2622 68.31 0 3539526..3540623 - 365 162450891 - sce2619 - hypothetical protein 2623 70.95 0 3540629..3542170 - 513 162450892 huyA2 sce2620 - N-methylhydantoinase A, beta-subunit (ATP-hydrolyzing) 2624 69.16 0 3542200..3543921 - 573 162450893 huyB sce2621 - N-methylhydantoinase B, alpha subunit 2625 71.71 0 3543955..3546015 - 686 162450894 huyA1 sce2622 - N-methylhydantoinase A, beta subunit 2626 74.39 0 3546363..3547955 + 530 162450895 - sce2623 - ATPase with chaperone activity, ComM-like protein 2627 68.22 0 3548126..3549154 + 342 162450896 recA1 sce2624 - RecA protein 2628 71.49 0 3549384..3549860 + 158 162450897 ssb sce2625 - ssDNA-binding protein 2629 61.77 -2 3550222..3551406 - 394 162450898 - sce2626 - putative secreted protein 2630 74.04 0 3551806..3552117 + 103 162450899 - sce2627 - single-strand binding protein 2631 64.81 -1 3552644..3553399 + 251 162450900 - sce2628 - putative secreted protein 2632 70.73 0 3553488..3554324 - 278 162450901 - sce2629 - putative secreted protein 2633 65.77 -1 3554388..3554831 - 147 162450902 - sce2630 - hypothetical protein 2634 73.26 0 3555143..3555415 + 90 162450903 - sce2631 - hypothetical protein 2635 70.50 0 3555641..3557416 - 591 162450904 - sce2632 - calcineurin-like phosphoesterase family protein 2636 69.76 0 3557513..3561328 - 1271 162450905 mfd sce2633 - transcription-repair coupling factor 2637 59.59 -2 3561815..3562846 - 343 162450906 - sce2634 - transposase 2638 65.54 -1 3563015..3563722 - 235 162450907 - sce2635 - hypothetical protein 2639 67.50 0 3563884..3564483 - 199 162450908 - sce2636 - hypothetical protein 2640 65.06 -1 3564480..3564728 - 82 162450909 - sce2637 - peptidyl-glycine alpha-amidating monooxygenase precursor 2641 69.99 0 3564962..3565864 + 300 162450910 - sce2638 - TetR family transcriptional regulator 2642 72.05 0 3566086..3570282 + 1398 162450911 - sce2639 - hypothetical protein 2643 70.26 0 3570307..3571668 - 453 162450912 - sce2640 - hypothetical protein 2644 71.66 0 3571896..3572957 - 353 162450913 - sce2641 - putative secreted protein 2645 69.11 0 3573248..3574846 - 532 162450914 - sce2642 - hypothetical protein 2646 72.85 0 3574870..3576309 - 479 162450915 - sce2643 - hypothetical protein 2647 76.69 +1 3576309..3577376 - 355 162450916 - sce2644 - hypothetical protein 2648 64.29 -1 3577484..3577609 + 41 162450917 - sce2645 - hypothetical protein 2649 70.48 0 3577588..3579240 - 550 162450918 - sce2646 - oxidoreductase 2650 75.19 +1 3579237..3579623 - 128 162450919 - sce2647 - putative secreted protein 2651 72.66 0 3580071..3581939 + 622 162450920 - sce2648 - PE-PGRS family protein 2652 73.64 0 3582006..3582392 - 128 162450921 - sce2649 - hypothetical protein 2653 67.71 0 3583354..3584412 + 352 162450922 - sce2650 - hypothetical protein 2654 68.49 0 3584545..3586518 - 657 162450923 msbA6 sce2651 - carbohydrate ABC transporter 2655 66.67 -1 3586691..3586789 + 32 162450924 - sce2652 - hypothetical protein 2656 71.61 0 3586848..3590003 + 1051 162450925 - sce2653 - two-component system sensor histidine kinase/response regulator, hybrid 2657 68.50 0 3590089..3590469 + 126 162450926 - sce2654 - two-component response regulator 2658 74.15 0 3590539..3593196 - 885 162450927 - sce2655 - two-component hybrid sensor and regulator 2659 68.44 0 3593617..3593955 + 112 162450928 - sce2656 - two-component response regulator 2660 75.47 +1 3593960..3596026 + 688 162450929 cheA5 sce2657 - chemotaxis protein 2661 71.46 0 3596023..3596460 + 145 162450930 cheW6 sce2658 - purine-binding chemotaxis protein CheW 2662 75.57 +1 3596450..3598999 + 849 162450931 - sce2659 - chemotaxis sensory transducer 2663 79.02 +1 3598996..3601359 + 787 162450932 - sce2660 - hypothetical protein 2664 70.88 0 3601370..3602200 + 276 162450933 cheR3 sce2661 - chemotaxis protein methyltransferase 2 2665 73.82 0 3602197..3603231 + 344 162450934 cheR4 sce2662 - chemotaxis response regulator 2666 73.07 0 3603265..3604467 - 400 162450935 - sce2663 - hypothetical protein 2667 66.67 -1 3604540..3605502 - 320 162450936 - sce2664 - hypothetical protein 2668 67.73 0 3605713..3606372 + 219 162450937 - sce2665 - isochorismatase 2669 72.16 0 3606440..3606985 - 181 162450938 - sce2666 - hypothetical protein 2670 65.99 -1 3607017..3607460 - 147 162450939 - sce2667 - hypothetical protein 2671 77.64 +1 3607821..3613040 - 1739 162450940 - sce2668 - protein kinase 2672 73.20 0 3613157..3613891 + 244 162450941 - sce2669 - hypothetical protein 2673 71.48 0 3614033..3615154 + 373 162450942 - sce2670 - hypothetical protein 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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