version 1.0
Sorangium cellulosum 'So ce 56', complete genome - 1..13033779 9384 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1748 71.69 0 2376921..2378015 + 364 162450017 pheA1 sce1746 - hypothetical protein 1749 71.48 0 2378015..2379052 + 345 162450018 - sce1747 - hypothetical protein 1750 76.95 +1 2379054..2381777 - 907 162450019 hrpB sce1748 - ATP-dependent RNA helicase 1751 75.14 +1 2381867..2383471 + 534 162450020 gatA2 sce1749 - hypothetical protein 1752 76.45 +1 2383906..2385009 - 367 162450021 - sce1750 - putative glycosyltransferase 1753 64.44 -1 2385211..2385435 - 74 162450022 rpsU sce1751 - 30S ribosomal protein S21 1754 73.89 0 2385857..2386396 + 179 162450023 - sce1752 - FUR family transcriptional regulator 1755 66.67 -1 2386484..2386912 + 142 162450024 rubY sce1753 - hypothetical protein 1756 70.35 0 2387081..2388439 + 452 162450025 glpC sce1754 - hypothetical protein 1757 67.71 0 2388474..2389049 + 191 162450026 - sce1755 - hypothetical protein 1758 70.05 0 2389055..2389498 + 147 162450027 fcbC sce1756 - 4-hydroxybenzoyl-CoA thioesterase 1759 74.23 0 2389495..2390142 + 215 162450028 - sce1757 - hypothetical protein 1760 72.39 0 2390169..2390867 + 232 162450029 rpiA sce1758 - ribose-5-phosphate isomerase 1761 73.94 0 2390985..2392277 - 430 162450030 argH sce1759 - argininosuccinate lyase 1762 73.09 0 2392278..2393366 - 362 162450031 - sce1760 - hypothetical protein 1763 73.09 0 2393416..2394504 + 362 162450032 idi sce1761 - isopentenyl pyrophosphate isomerase 1764 65.48 -1 2394730..2395575 + 281 162450033 - sce1762 - GAF domain-containing protein 1765 61.64 -2 2395578..2395955 + 125 162450034 - sce1763 - response regulator 1766 66.56 -1 2396087..2397019 - 310 162450035 - sce1764 - FHA/GGDEF domain-containing protein 1767 71.73 0 2397202..2397951 - 249 162450036 - sce1765 - hypothetical protein 1768 75.38 +1 2398077..2401265 + 1062 162450037 glnE sce1766 - glutamate-ammonia-ligase adenylyltransferase 1769 69.00 0 2401299..2401856 + 185 162450038 - sce1767 - hypothetical protein 1770 68.10 0 2402240..2403706 + 488 162450039 - sce1768 - hypothetical protein 1771 73.17 0 2404307..2404675 + 122 162450040 - sce1769 - hypothetical protein 1772 73.43 0 2405265..2405663 + 132 162450041 - sce1770 - hypothetical protein 1773 77.15 +1 2405867..2406925 - 352 162450042 - sce1771 - keratin associated protein 5-4 1774 65.52 -1 2406976..2408193 + 405 162450043 - sce1772 - hypothetical protein 1775 63.40 -1 2408200..2409762 + 520 162450044 spoVR sce1773 - stage V sporulation protein R 1776 75.10 0 2410206..2410976 + 256 162450045 - sce1774 - hypothetical protein 1777 57.71 -2 2411987..2412544 + 185 162450046 - sce1775 - hypothetical protein 1778 61.50 -2 2412541..2413779 + 412 162450047 ubiE1 sce1776 - quinone methyltransferase 1779 63.99 -1 2413825..2416212 + 795 162450048 - sce1777 - phosphoserine phosphatase 1780 57.63 -2 2416237..2417154 + 305 162450049 - sce1778 - hypothetical protein 1781 61.99 -2 2417230..2418192 + 320 162450050 - sce1779 - phosphoserine phosphatase 1782 59.65 -2 2418114..2418683 + 189 162450051 - sce1780 - hypothetical protein 1783 61.56 -2 2418718..2419128 + 136 162450052 - sce1781 - hypothetical protein 1784 69.32 0 2419163..2420521 + 452 162450053 rsbR1 sce1782 - positive regulator of sigma-B 1785 66.26 -1 2420799..2421287 + 162 162450054 - sce1783 - MarR family transcriptional regulator 1786 67.41 0 2421312..2422250 + 312 162450055 - sce1784 - hypothetical protein 1787 73.13 0 2422205..2423071 - 288 162450058 - sce1785 - hypothetical protein 1788 72.77 0 2422247..2423032 + 261 162450056 crt sce1786 - putative enoyl-CoA hydratase/isomerase family protein 1789 71.02 0 2423070..2424632 + 520 162450057 - sce1787 - Acyl-CoA carboxylase subunit 1790 73.16 0 2424696..2426174 - 492 162450059 - sce1788 - hypothetical protein 1791 77.16 +1 2426297..2427049 + 250 162450060 thiE1 sce1789 - thiamine-phosphate diphosphorylase 1792 80.43 +2 2427046..2427648 + 200 162450061 - sce1790 - hypothetical protein 1793 76.10 +1 2427686..2428681 - 331 162450062 holB sce1791 - DNA polymerase III delta' subunit 1794 72.89 0 2428834..2429862 + 342 162450063 - sce1792 - hypothetical protein 1795 71.17 0 2429970..2431478 + 502 162450064 - sce1793 - hypothetical protein 1796 71.02 0 2431572..2433017 - 481 162450065 - sce1794 - protein kinase 1797 77.33 +1 2433187..2434077 + 296 162450066 - sce1795 - hypothetical protein 1798 73.03 0 2434136..2434654 - 172 162450067 - sce1796 - hypothetical protein 1799 70.09 0 2434948..2437020 + 690 162450068 - sce1797 - hypothetical protein 1800 72.32 0 2437012..2438763 - 583 162450069 - sce1798 - putative secreted protein 1801 72.43 0 2439168..2440208 - 346 162450070 obg sce1799 - GTP binding protein 1802 73.53 0 2440308..2441822 + 504 162450071 - sce1800 - sensory box hybrid histidine kinase 1803 68.57 0 2441842..2442525 - 227 162450072 - sce1801 - hypothetical protein 1804 69.66 0 2443117..2444118 + 333 162450073 - sce1802 - hypothetical protein 1805 71.76 0 2444306..2445130 + 274 162450074 frpC sce1803 - putative hemolysin-type calcium binding protein 1806 68.42 0 2445167..2446480 - 437 162450075 - sce1804 - myo-inositol 1-phosphate synthase A1 1807 74.49 0 2446774..2447949 - 391 162450076 - sce1805 - hypothetical protein 1808 72.53 0 2448121..2449416 + 431 162450077 - sce1806 - hypothetical protein 1809 71.07 0 2449395..2450348 - 317 162450078 - sce1807 - hypothetical protein 1810 71.10 0 2450836..2451624 + 262 162450079 - sce1808 - hypothetical protein 1811 73.45 0 2451931..2452932 - 333 162450080 - sce1809 - hypothetical protein 1812 80.75 +2 2453127..2455781 + 884 162450081 - sce1810 - putative phosphohydrolase 1813 76.34 +1 2455812..2457569 + 585 162450082 - sce1811 - hypothetical protein 1814 66.97 0 2457760..2458086 + 108 162450083 - sce1812 - hypothetical protein 1815 73.15 0 2458148..2458702 + 184 162450084 purE sce1813 - phosphoribosylaminoimidazole carboxylase 1816 74.77 0 2458758..2459966 + 402 162450085 purK sce1814 - phosphoribosylaminoimidazole carboxylase 1817 67.95 0 2460322..2461806 + 494 162450086 - sce1815 - hypothetical protein 1818 66.53 -1 2462021..2462734 + 237 162450087 - sce1816 - hypothetical protein 1819 70.05 0 2462731..2463795 + 354 162450088 - sce1817 - hypothetical protein 1820 67.99 0 2463834..2464817 + 327 162450089 - sce1818 - hypothetical protein 1821 72.82 0 2464914..2465417 + 167 162450090 - sce1819 - hypothetical protein 1822 68.42 0 2465602..2466171 - 189 162450091 - sce1820 - hypothetical protein 1823 64.44 -1 2466491..2466895 + 134 162450092 - sce1821 - hypothetical protein 1824 73.29 0 2466977..2468500 - 507 162450093 - sce1822 - hypothetical protein 1825 76.16 +1 2468757..2469167 - 136 162450094 - sce1823 - hypothetical protein 1826 71.35 0 2469915..2470106 + 63 162450095 - sce1824 - hypothetical protein 1827 71.25 0 2470119..2471099 - 326 162450096 panE2 sce1825 - 2-dehydropantoate 2-reductase 1828 70.56 0 2471475..2472527 + 350 162450097 gnl1 sce1826 - hypothetical protein 1829 72.25 0 2472737..2474098 + 453 162450098 - sce1827 - hypothetical protein 1830 75.12 0 2474241..2474666 - 141 162450099 - sce1828 - hypothetical protein 1831 73.62 0 2474790..2476184 + 464 162450100 nirJ sce1829 - heme biosynthesis protein 1832 70.19 0 2476203..2477024 + 273 162450101 - sce1830 - hypothetical protein 1833 75.00 0 2477072..2477863 - 263 162450102 - sce1831 - hypothetical protein 1834 66.00 -1 2478165..2479820 + 551 162450103 srfJ sce1832 - glucosylceramidase (O-glycosyl hydrolase) 1835 67.81 0 2480170..2481219 + 349 162450104 - sce1833 - hypothetical protein 1836 58.22 -2 2481320..2483155 + 611 162450105 - sce1834 - hypothetical protein 1837 73.13 0 2483490..2483984 - 164 162450106 - sce1835 - hypothetical protein 1838 71.77 0 2484047..2484379 - 110 162450107 - sce1836 - putative transcriptional regulator 1839 75.92 +1 2484882..2488241 + 1119 162450108 - sce1837 - hypothetical protein 1840 71.81 0 2488496..2489059 - 187 162450109 - sce1838 - hypothetical protein 1841 72.23 0 2489053..2490381 - 442 162450111 - sce1839 - hypothetical protein 1842 74.80 0 2490380..2490883 + 167 162450110 - sce1840 - hypothetical protein 1843 67.78 0 2490918..2491817 - 299 162450112 - sce1841 - hypothetical protein 1844 71.32 0 2491850..2492944 - 364 162450113 - sce1842 - oxidoreductase 1845 68.30 0 2493099..2494019 - 306 162450114 - sce1843 - LysR family transcriptional regulator 1846 74.98 0 2494140..2497160 - 1006 162450115 - sce1844 - hypothetical protein 1847 70.76 0 2497409..2499166 + 585 162450116 - sce1845 - sigma-54 dependent transcriptional regulator 71.02 MEAN 4.11 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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